Protein–RNA interactions for Protein: Q06287

EMG1, Ribosomal RNA small subunit methyltransferase NEP1, yeastyeast

Known RBP Predictions only

Length 252 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
EMG1Q06287 GIS3YLR094C 1509 nt11.5□□□□□ -0.57
EMG1Q06287 GUT2YIL155C 1950 nt11.5□□□□□ -0.57
EMG1Q06287 WWM1YFL010C 636 nt11.5□□□□□ -0.57
EMG1Q06287 SIS1YNL007C 1059 nt11.5□□□□□ -0.57
EMG1Q06287 CCT6YDR188W 1641 nt11.49□□□□□ -0.57
EMG1Q06287 NPL3YDR432W 1245 nt11.43□□□□□ -0.58
EMG1Q06287 SEC11YIR022W 504 nt11.43□□□□□ -0.58
EMG1Q06287 HOM6YJR139C 1080 nt11.42□□□□□ -0.58
EMG1Q06287 GFD2YCL036W 1701 nt11.42□□□□□ -0.58
EMG1Q06287 ART5YGR068C 1761 nt11.41□□□□□ -0.58
EMG1Q06287 LSM3YLR438C-A 270 nt11.41□□□□□ -0.58
EMG1Q06287 YFL021C-AYFL021C-A 855 nt11.39□□□□□ -0.59
EMG1Q06287 YSC84YHR016C 1407 nt11.39□□□□□ -0.59
EMG1Q06287 RTS2YOR077W 699 nt11.39□□□□□ -0.59
EMG1Q06287 PIB2YGL023C 1908 nt11.39□□□□□ -0.59
EMG1Q06287 YOR139CYOR139C 393 nt11.38□□□□□ -0.59
EMG1Q06287 SUF2tP(AGG)C 72 nt11.36□□□□□ -0.59
EMG1Q06287 SUF10tP(AGG)N 72 nt11.36□□□□□ -0.59
EMG1Q06287 YOL037CYOL037C 354 nt11.35□□□□□ -0.59
EMG1Q06287 YHL050CYHL050C 2094 nt11.34□□□□□ -0.59
EMG1Q06287 MNP1YGL068W 585 nt11.33□□□□□ -0.6
EMG1Q06287 NVJ2YPR091C 2313 nt11.3□□□□□ -0.6
EMG1Q06287 CSM2YIL132C 642 nt11.29□□□□□ -0.6
EMG1Q06287 RKM5YLR137W 1104 nt11.28□□□□□ -0.6
EMG1Q06287 RRT12YCR045C 1476 nt11.26□□□□□ -0.61
EMG1Q06287 PET9YBL030C 957 nt11.24□□□□□ -0.61
EMG1Q06287 CUE1YMR264W 612 nt11.21□□□□□ -0.61
EMG1Q06287 RTF1YGL244W 1677 nt11.2□□□□□ -0.62
EMG1Q06287 TIR4YOR009W 1464 nt11.2□□□□□ -0.62
EMG1Q06287 YMR057CYMR057C 372 nt11.12□□□□□ -0.63
EMG1Q06287 YCH1YGR203W 447 nt11.1□□□□□ -0.63
EMG1Q06287 PTK1YKL198C 1989 nt11.1□□□□□ -0.63
EMG1Q06287 FPS1YLL043W 2010 nt11.08□□□□□ -0.64
EMG1Q06287 BOP3YNL042W 1191 nt11.07□□□□□ -0.64
EMG1Q06287 YNL195CYNL195C 786 nt11.04□□□□□ -0.64
EMG1Q06287 YIL100WYIL100W 354 nt11.03□□□□□ -0.64
EMG1Q06287 NCP1YHR042W 2076 nt10.99□□□□□ -0.65
EMG1Q06287 YLR281CYLR281C 468 nt10.99□□□□□ -0.65
EMG1Q06287 tM(CAU)CtM(CAU)C 72 nt10.98□□□□□ -0.65
EMG1Q06287 IMT4tM(CAU)E 72 nt10.98□□□□□ -0.65
EMG1Q06287 IMT3tM(CAU)J3 72 nt10.98□□□□□ -0.65
EMG1Q06287 IMT1tM(CAU)O1 72 nt10.98□□□□□ -0.65
EMG1Q06287 IMT2tM(CAU)P 72 nt10.98□□□□□ -0.65
EMG1Q06287 PAU21YOR394W 495 nt10.97□□□□□ -0.65
EMG1Q06287 PAU22YPL282C 495 nt10.97□□□□□ -0.65
EMG1Q06287 WHI5YOR083W 888 nt10.94□□□□□ -0.66
EMG1Q06287 YLR236CYLR236C 324 nt10.93□□□□□ -0.66
EMG1Q06287 PUS2YGL063W 1113 nt10.92□□□□□ -0.66
EMG1Q06287 YLR154C-GYLR154C-G 150 nt10.87□□□□□ -0.67
EMG1Q06287 IMP2'YIL154C 1041 nt10.86□□□□□ -0.67
EMG1Q06287 YJL152WYJL152W 360 nt10.85□□□□□ -0.67
EMG1Q06287 ARO7YPR060C 771 nt10.84□□□□□ -0.67
EMG1Q06287 YFL054CYFL054C 1941 nt10.82□□□□□ -0.68
EMG1Q06287 LCB1YMR296C 1677 nt10.82□□□□□ -0.68
EMG1Q06287 YCL048W-AYCL048W-A 240 nt10.79□□□□□ -0.68
EMG1Q06287 SPT8YLR055C 1809 nt10.77□□□□□ -0.69
EMG1Q06287 DSK2YMR276W 1122 nt10.75□□□□□ -0.69
EMG1Q06287 MET8YBR213W 825 nt10.69□□□□□ -0.7
EMG1Q06287 IDH1YNL037C 1083 nt10.67□□□□□ -0.7
EMG1Q06287 BOR1YNL275W 1731 nt10.64□□□□□ -0.71
EMG1Q06287 FMP45YDL222C 930 nt10.64□□□□□ -0.71
EMG1Q06287 RRD1YIL153W 1182 nt10.63□□□□□ -0.71
EMG1Q06287 CLB6YGR109C 1143 nt10.61□□□□□ -0.71
EMG1Q06287 LYS4YDR234W 2082 nt10.6□□□□□ -0.71
EMG1Q06287 SWE1YJL187C 2460 nt10.58□□□□□ -0.72
EMG1Q06287 SIM1YIL123W 1431 nt10.55□□□□□ -0.72
EMG1Q06287 PCM1YEL058W 1674 nt10.54□□□□□ -0.72
EMG1Q06287 DED1YOR204W 1815 nt10.54□□□□□ -0.72
EMG1Q06287 UME6YDR207C 2511 nt10.54□□□□□ -0.72
EMG1Q06287 GBP2YCL011C 1284 nt10.53□□□□□ -0.72
EMG1Q06287 YPR011CYPR011C 981 nt10.51□□□□□ -0.73
EMG1Q06287 FMT1YBL013W 1206 nt10.5□□□□□ -0.73
EMG1Q06287 YDR433WYDR433W 441 nt10.49□□□□□ -0.73
EMG1Q06287 FMP52YER004W 696 nt10.49□□□□□ -0.73
EMG1Q06287 HSP60YLR259C 1719 nt10.47□□□□□ -0.73
EMG1Q06287 ERV46YAL042W 1248 nt10.47□□□□□ -0.73
EMG1Q06287 BIO4YNR057C 714 nt10.46□□□□□ -0.73
EMG1Q06287 TCD2YKL027W 1344 nt10.45□□□□□ -0.74
EMG1Q06287 REG2YBR050C 1017 nt10.45□□□□□ -0.74
EMG1Q06287 ADH2YMR303C 1047 nt10.44□□□□□ -0.74
EMG1Q06287 YKR040CYKR040C 504 nt10.42□□□□□ -0.74
EMG1Q06287 YJL225CYJL225C 5277 nt10.41□□□□□ -0.74
EMG1Q06287 LPX1YOR084W 1164 nt10.41□□□□□ -0.74
EMG1Q06287 CWP1YKL096W 720 nt10.4□□□□□ -0.74
EMG1Q06287 SNF6YHL025W 999 nt10.37□□□□□ -0.75
EMG1Q06287 GLK1YCL040W 1503 nt10.33□□□□□ -0.76
EMG1Q06287 YEL009C-AYEL009C-A 408 nt10.32□□□□□ -0.76
EMG1Q06287 PAM17YKR065C 594 nt10.32□□□□□ -0.76
EMG1Q06287 MRPL8YJL063C 717 nt10.31□□□□□ -0.76
EMG1Q06287 CRR1YLR213C 1269 nt10.3□□□□□ -0.76
EMG1Q06287 MXR2YCL033C 507 nt10.3□□□□□ -0.76
EMG1Q06287 MCH5YOR306C 1566 nt10.29□□□□□ -0.76
EMG1Q06287 FUR4YBR021W 1902 nt10.29□□□□□ -0.76
EMG1Q06287 ALG12YNR030W 1656 nt10.28□□□□□ -0.76
EMG1Q06287 YHR056W-AYHR056W-A 435 nt10.28□□□□□ -0.76
EMG1Q06287 ERF2YLR246W 1080 nt10.28□□□□□ -0.76
EMG1Q06287 MIC10YCL057C-A 294 nt10.27□□□□□ -0.77
EMG1Q06287 YCL042WYCL042W 360 nt10.26□□□□□ -0.77
EMG1Q06287 SOR2YDL246C 1074 nt10.25□□□□□ -0.77
EMG1Q06287 ADO1YJR105W 1023 nt10.25□□□□□ -0.77
Retrieved 100 of 7,029 protein–RNA pairs in 38.5 ms