Protein–RNA interactions for Protein: Q05775

HCR1, Eukaryotic translation initiation factor 3 subunit J, yeastyeast

Known RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
HCR1Q05775 YDL221WYDL221W 552 nt13.7□□□□□ -0.22
HCR1Q05775 YBR220CYBR220C 1683 nt13.65□□□□□ -0.22
HCR1Q05775 YOL037CYOL037C 354 nt13.61□□□□□ -0.23
HCR1Q05775 SDH1YKL148C 1923 nt13.59□□□□□ -0.23
HCR1Q05775 ART5YGR068C 1761 nt13.59□□□□□ -0.23
HCR1Q05775 GFD2YCL036W 1701 nt13.55□□□□□ -0.24
HCR1Q05775 IRC15YPL017C 1500 nt13.54□□□□□ -0.24
HCR1Q05775 tM(CAU)CtM(CAU)C 72 nt13.53□□□□□ -0.24
HCR1Q05775 IMT4tM(CAU)E 72 nt13.53□□□□□ -0.24
HCR1Q05775 IMT3tM(CAU)J3 72 nt13.53□□□□□ -0.24
HCR1Q05775 IMT1tM(CAU)O1 72 nt13.53□□□□□ -0.24
HCR1Q05775 IMT2tM(CAU)P 72 nt13.53□□□□□ -0.24
HCR1Q05775 TAT1YBR069C 1860 nt13.52□□□□□ -0.25
HCR1Q05775 PET9YBL030C 957 nt13.51□□□□□ -0.25
HCR1Q05775 YCH1YGR203W 447 nt13.48□□□□□ -0.25
HCR1Q05775 SCC4YER147C 1875 nt13.48□□□□□ -0.25
HCR1Q05775 TIR4YOR009W 1464 nt13.46□□□□□ -0.25
HCR1Q05775 GIS3YLR094C 1509 nt13.45□□□□□ -0.26
HCR1Q05775 RTS2YOR077W 699 nt13.41□□□□□ -0.26
HCR1Q05775 YLR154C-GYLR154C-G 150 nt13.37□□□□□ -0.27
HCR1Q05775 YMR057CYMR057C 372 nt13.35□□□□□ -0.27
HCR1Q05775 YJL152WYJL152W 360 nt13.32□□□□□ -0.28
HCR1Q05775 CUE1YMR264W 612 nt13.31□□□□□ -0.28
HCR1Q05775 MOT3YMR070W 1473 nt13.25□□□□□ -0.29
HCR1Q05775 PUS2YGL063W 1113 nt13.25□□□□□ -0.29
HCR1Q05775 SEC11YIR022W 504 nt13.22□□□□□ -0.29
HCR1Q05775 YLR281CYLR281C 468 nt13.22□□□□□ -0.29
HCR1Q05775 WHI5YOR083W 888 nt13.22□□□□□ -0.29
HCR1Q05775 FPS1YLL043W 2010 nt13.22□□□□□ -0.29
HCR1Q05775 YIL100WYIL100W 354 nt13.17□□□□□ -0.3
HCR1Q05775 YSC84YHR016C 1407 nt13.16□□□□□ -0.3
HCR1Q05775 PCH2YBR186W 1695 nt13.16□□□□□ -0.3
HCR1Q05775 YCL048W-AYCL048W-A 240 nt13.16□□□□□ -0.3
HCR1Q05775 YLR236CYLR236C 324 nt13.14□□□□□ -0.31
HCR1Q05775 GUT2YIL155C 1950 nt13.1□□□□□ -0.31
HCR1Q05775 YHL050CYHL050C 2094 nt13.09□□□□□ -0.31
HCR1Q05775 YNL195CYNL195C 786 nt13.09□□□□□ -0.31
HCR1Q05775 RRT12YCR045C 1476 nt13.06□□□□□ -0.32
HCR1Q05775 IDH1YNL037C 1083 nt13.01□□□□□ -0.33
HCR1Q05775 MRPL8YJL063C 717 nt13□□□□□ -0.33
HCR1Q05775 IMP2'YIL154C 1041 nt12.97□□□□□ -0.33
HCR1Q05775 GBP2YCL011C 1284 nt12.94□□□□□ -0.34
HCR1Q05775 DSK2YMR276W 1122 nt12.93□□□□□ -0.34
HCR1Q05775 FMP45YDL222C 930 nt12.92□□□□□ -0.34
HCR1Q05775 PIB2YGL023C 1908 nt12.88□□□□□ -0.35
HCR1Q05775 RRD1YIL153W 1182 nt12.87□□□□□ -0.35
HCR1Q05775 RTF1YGL244W 1677 nt12.86□□□□□ -0.35
HCR1Q05775 TCD2YKL027W 1344 nt12.85□□□□□ -0.35
HCR1Q05775 ADO1YJR105W 1023 nt12.81□□□□□ -0.36
HCR1Q05775 BOP3YNL042W 1191 nt12.81□□□□□ -0.36
HCR1Q05775 DED1YOR204W 1815 nt12.81□□□□□ -0.36
HCR1Q05775 YPR011CYPR011C 981 nt12.79□□□□□ -0.36
HCR1Q05775 FMP52YER004W 696 nt12.78□□□□□ -0.36
HCR1Q05775 YDR433WYDR433W 441 nt12.77□□□□□ -0.37
HCR1Q05775 NCP1YHR042W 2076 nt12.73□□□□□ -0.37
HCR1Q05775 ERV46YAL042W 1248 nt12.69□□□□□ -0.38
HCR1Q05775 FMT1YBL013W 1206 nt12.69□□□□□ -0.38
HCR1Q05775 MXR2YCL033C 507 nt12.69□□□□□ -0.38
HCR1Q05775 PCM1YEL058W 1674 nt12.67□□□□□ -0.38
HCR1Q05775 LCB1YMR296C 1677 nt12.66□□□□□ -0.38
HCR1Q05775 PTK1YKL198C 1989 nt12.65□□□□□ -0.38
HCR1Q05775 LPX1YOR084W 1164 nt12.65□□□□□ -0.38
HCR1Q05775 YEL076C-AYEL076C-A 651 nt12.64□□□□□ -0.39
HCR1Q05775 YEL076CYEL076C 651 nt12.64□□□□□ -0.39
HCR1Q05775 YLR464WYLR464W 651 nt12.64□□□□□ -0.39
HCR1Q05775 UBX6YJL048C 1191 nt12.63□□□□□ -0.39
HCR1Q05775 YKR040CYKR040C 504 nt12.63□□□□□ -0.39
HCR1Q05775 CWP1YKL096W 720 nt12.61□□□□□ -0.39
HCR1Q05775 YJL225CYJL225C 5277 nt12.61□□□□□ -0.39
HCR1Q05775 ADH2YMR303C 1047 nt12.6□□□□□ -0.39
HCR1Q05775 SOR2YDL246C 1074 nt12.59□□□□□ -0.39
HCR1Q05775 SOR1YJR159W 1074 nt12.59□□□□□ -0.39
HCR1Q05775 YCL042WYCL042W 360 nt12.58□□□□□ -0.4
HCR1Q05775 PAC11YDR488C 1602 nt12.58□□□□□ -0.4
HCR1Q05775 SIM1YIL123W 1431 nt12.57□□□□□ -0.4
HCR1Q05775 SNF6YHL025W 999 nt12.57□□□□□ -0.4
HCR1Q05775 FRD1YEL047C 1413 nt12.52□□□□□ -0.41
HCR1Q05775 BIO4YNR057C 714 nt12.48□□□□□ -0.41
HCR1Q05775 RTG1YOL067C 534 nt12.47□□□□□ -0.41
HCR1Q05775 SPP1YPL138C 1062 nt12.43□□□□□ -0.42
HCR1Q05775 YFL054CYFL054C 1941 nt12.43□□□□□ -0.42
HCR1Q05775 YIH1YCR059C 777 nt12.41□□□□□ -0.42
HCR1Q05775 LYS4YDR234W 2082 nt12.41□□□□□ -0.42
HCR1Q05775 RNQ1YCL028W 1218 nt12.38□□□□□ -0.43
HCR1Q05775 HUA1YGR268C 597 nt12.35□□□□□ -0.43
HCR1Q05775 ERF2YLR246W 1080 nt12.34□□□□□ -0.43
HCR1Q05775 YDR094WYDR094W 336 nt12.33□□□□□ -0.44
HCR1Q05775 YLL053CYLL053C 459 nt12.33□□□□□ -0.44
HCR1Q05775 SPT8YLR055C 1809 nt12.32□□□□□ -0.44
HCR1Q05775 DIC1YLR348C 897 nt12.3□□□□□ -0.44
HCR1Q05775 CRR1YLR213C 1269 nt12.28□□□□□ -0.44
HCR1Q05775 FTR1YER145C 1215 nt12.23□□□□□ -0.45
HCR1Q05775 YFL015W-AYFL015W-A 318 nt12.21□□□□□ -0.45
HCR1Q05775 PTH1YHR189W 573 nt12.21□□□□□ -0.45
HCR1Q05775 YLR235CYLR235C 399 nt12.21□□□□□ -0.45
HCR1Q05775 ATF2YGR177C 1608 nt12.21□□□□□ -0.46
HCR1Q05775 RDN37-1RDN37-1 5354 nt12.19□□□□□ -0.46
HCR1Q05775 RDN37-2RDN37-2 5354 nt12.19□□□□□ -0.46
HCR1Q05775 YFL067WYFL067W 528 nt12.19□□□□□ -0.46
HCR1Q05775 GAL1YBR020W 1587 nt12.18□□□□□ -0.46
Retrieved 100 of 7,029 protein–RNA pairs in 12.9 ms