Protein–RNA interactions for Protein: Q04062

RPN9, 26S proteasome regulatory subunit RPN9, yeastyeast

Known RBP Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPN9Q04062 WHI5YOR083W 888 nt12.26□□□□□ -0.45
RPN9Q04062 CAC2YML102W 1407 nt12.26□□□□□ -0.45
RPN9Q04062 ART5YGR068C 1761 nt12.21□□□□□ -0.45
RPN9Q04062 tM(CAU)CtM(CAU)C 72 nt12.2□□□□□ -0.46
RPN9Q04062 IMT4tM(CAU)E 72 nt12.2□□□□□ -0.46
RPN9Q04062 IMT3tM(CAU)J3 72 nt12.2□□□□□ -0.46
RPN9Q04062 IMT1tM(CAU)O1 72 nt12.2□□□□□ -0.46
RPN9Q04062 IMT2tM(CAU)P 72 nt12.2□□□□□ -0.46
RPN9Q04062 YCH1YGR203W 447 nt12.2□□□□□ -0.46
RPN9Q04062 PET9YBL030C 957 nt12.2□□□□□ -0.46
RPN9Q04062 TIR4YOR009W 1464 nt12.2□□□□□ -0.46
RPN9Q04062 YDL221WYDL221W 552 nt12.19□□□□□ -0.46
RPN9Q04062 YMR090WYMR090W 684 nt12.19□□□□□ -0.46
RPN9Q04062 GFD2YCL036W 1701 nt12.19□□□□□ -0.46
RPN9Q04062 PUS2YGL063W 1113 nt12.12□□□□□ -0.47
RPN9Q04062 IRC15YPL017C 1500 nt12.11□□□□□ -0.47
RPN9Q04062 YJL152WYJL152W 360 nt12.1□□□□□ -0.47
RPN9Q04062 PAC11YDR488C 1602 nt12.05□□□□□ -0.48
RPN9Q04062 IMP2'YIL154C 1041 nt12.05□□□□□ -0.48
RPN9Q04062 YBR220CYBR220C 1683 nt12.05□□□□□ -0.48
RPN9Q04062 NVJ2YPR091C 2313 nt12.05□□□□□ -0.48
RPN9Q04062 SDH1YKL148C 1923 nt12.04□□□□□ -0.48
RPN9Q04062 Q0182Q0182 405 nt12.04□□□□□ -0.48
RPN9Q04062 YMR057CYMR057C 372 nt12.04□□□□□ -0.48
RPN9Q04062 DSK2YMR276W 1122 nt12□□□□□ -0.49
RPN9Q04062 GIS3YLR094C 1509 nt12□□□□□ -0.49
RPN9Q04062 RTS2YOR077W 699 nt11.99□□□□□ -0.49
RPN9Q04062 SCC4YER147C 1875 nt11.96□□□□□ -0.49
RPN9Q04062 CUE1YMR264W 612 nt11.96□□□□□ -0.49
RPN9Q04062 YLR236CYLR236C 324 nt11.94□□□□□ -0.5
RPN9Q04062 IDH1YNL037C 1083 nt11.94□□□□□ -0.5
RPN9Q04062 FPS1YLL043W 2010 nt11.94□□□□□ -0.5
RPN9Q04062 BDF1YLR399C 2061 nt11.93□□□□□ -0.5
RPN9Q04062 YPR011CYPR011C 981 nt11.92□□□□□ -0.5
RPN9Q04062 YCL048W-AYCL048W-A 240 nt11.92□□□□□ -0.5
RPN9Q04062 GBP2YCL011C 1284 nt11.84□□□□□ -0.51
RPN9Q04062 FMP45YDL222C 930 nt11.81□□□□□ -0.52
RPN9Q04062 ERV46YAL042W 1248 nt11.8□□□□□ -0.52
RPN9Q04062 TAT1YBR069C 1860 nt11.8□□□□□ -0.52
RPN9Q04062 YIL100WYIL100W 354 nt11.78□□□□□ -0.52
RPN9Q04062 YDR433WYDR433W 441 nt11.73□□□□□ -0.53
RPN9Q04062 RRD1YIL153W 1182 nt11.73□□□□□ -0.53
RPN9Q04062 LPX1YOR084W 1164 nt11.73□□□□□ -0.53
RPN9Q04062 TCD2YKL027W 1344 nt11.72□□□□□ -0.53
RPN9Q04062 DED1YOR204W 1815 nt11.7□□□□□ -0.54
RPN9Q04062 MOT3YMR070W 1473 nt11.69□□□□□ -0.54
RPN9Q04062 YKR040CYKR040C 504 nt11.68□□□□□ -0.54
RPN9Q04062 SEC11YIR022W 504 nt11.65□□□□□ -0.54
RPN9Q04062 MXR2YCL033C 507 nt11.65□□□□□ -0.54
RPN9Q04062 YJL225CYJL225C 5277 nt11.64□□□□□ -0.55
RPN9Q04062 YSC84YHR016C 1407 nt11.64□□□□□ -0.55
RPN9Q04062 FMP52YER004W 696 nt11.63□□□□□ -0.55
RPN9Q04062 YNL195CYNL195C 786 nt11.63□□□□□ -0.55
RPN9Q04062 YHL050CYHL050C 2094 nt11.61□□□□□ -0.55
RPN9Q04062 RRT12YCR045C 1476 nt11.58□□□□□ -0.56
RPN9Q04062 FMT1YBL013W 1206 nt11.58□□□□□ -0.56
RPN9Q04062 PCH2YBR186W 1695 nt11.55□□□□□ -0.56
RPN9Q04062 SOR2YDL246C 1074 nt11.55□□□□□ -0.56
RPN9Q04062 SOR1YJR159W 1074 nt11.55□□□□□ -0.56
RPN9Q04062 FRD1YEL047C 1413 nt11.52□□□□□ -0.57
RPN9Q04062 RDN37-1RDN37-1 5354 nt11.5□□□□□ -0.57
RPN9Q04062 RDN37-2RDN37-2 5354 nt11.5□□□□□ -0.57
RPN9Q04062 GUT2YIL155C 1950 nt11.5□□□□□ -0.57
RPN9Q04062 YCL042WYCL042W 360 nt11.48□□□□□ -0.57
RPN9Q04062 SPP1YPL138C 1062 nt11.45□□□□□ -0.58
RPN9Q04062 PCM1YEL058W 1674 nt11.45□□□□□ -0.58
RPN9Q04062 CWP1YKL096W 720 nt11.44□□□□□ -0.58
RPN9Q04062 ADH2YMR303C 1047 nt11.44□□□□□ -0.58
RPN9Q04062 SNF6YHL025W 999 nt11.37□□□□□ -0.59
RPN9Q04062 PIB2YGL023C 1908 nt11.35□□□□□ -0.59
RPN9Q04062 NCP1YHR042W 2076 nt11.32□□□□□ -0.6
RPN9Q04062 RTF1YGL244W 1677 nt11.31□□□□□ -0.6
RPN9Q04062 LCB1YMR296C 1677 nt11.31□□□□□ -0.6
RPN9Q04062 YIH1YCR059C 777 nt11.3□□□□□ -0.6
RPN9Q04062 BOP3YNL042W 1191 nt11.3□□□□□ -0.6
RPN9Q04062 RTG1YOL067C 534 nt11.28□□□□□ -0.6
RPN9Q04062 RNQ1YCL028W 1218 nt11.28□□□□□ -0.6
RPN9Q04062 SIM1YIL123W 1431 nt11.27□□□□□ -0.6
RPN9Q04062 MRPL8YJL063C 717 nt11.27□□□□□ -0.61
RPN9Q04062 YLR235CYLR235C 399 nt11.27□□□□□ -0.61
RPN9Q04062 BIO4YNR057C 714 nt11.26□□□□□ -0.61
RPN9Q04062 PTH1YHR189W 573 nt11.23□□□□□ -0.61
RPN9Q04062 DIC1YLR348C 897 nt11.23□□□□□ -0.61
RPN9Q04062 YEL076C-AYEL076C-A 651 nt11.2□□□□□ -0.62
RPN9Q04062 YEL076CYEL076C 651 nt11.2□□□□□ -0.62
RPN9Q04062 YLR464WYLR464W 651 nt11.2□□□□□ -0.62
RPN9Q04062 YKL030WYKL030W 606 nt11.19□□□□□ -0.62
RPN9Q04062 YLL053CYLL053C 459 nt11.17□□□□□ -0.62
RPN9Q04062 UME6YDR207C 2511 nt11.15□□□□□ -0.62
RPN9Q04062 PTK1YKL198C 1989 nt11.14□□□□□ -0.63
RPN9Q04062 ADO1YJR105W 1023 nt11.14□□□□□ -0.63
RPN9Q04062 TIM23YNR017W 669 nt11.14□□□□□ -0.63
RPN9Q04062 ERF2YLR246W 1080 nt11.12□□□□□ -0.63
RPN9Q04062 FTR1YER145C 1215 nt11.11□□□□□ -0.63
RPN9Q04062 LYS4YDR234W 2082 nt11.1□□□□□ -0.63
RPN9Q04062 CRR1YLR213C 1269 nt11.08□□□□□ -0.64
RPN9Q04062 AQY1YPR192W 918 nt11.08□□□□□ -0.64
RPN9Q04062 GAL1YBR020W 1587 nt11.07□□□□□ -0.64
RPN9Q04062 HUA1YGR268C 597 nt11.06□□□□□ -0.64
RPN9Q04062 YLR179CYLR179C 606 nt11.06□□□□□ -0.64
Retrieved 100 of 7,029 protein–RNA pairs in 12.3 ms