Protein–RNA interactions for Protein: Q03430

RSM28, 37S ribosomal protein RSM28, mitochondrial, yeastyeast

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RSM28Q03430 HOM6YJR139C 1080 nt11.11□□□□□ -0.63
RSM28Q03430 SUF2tP(AGG)C 72 nt11.1□□□□□ -0.63
RSM28Q03430 SUF10tP(AGG)N 72 nt11.1□□□□□ -0.63
RSM28Q03430 CCT6YDR188W 1641 nt11.09□□□□□ -0.63
RSM28Q03430 SDH1YKL148C 1923 nt11.08□□□□□ -0.64
RSM28Q03430 NPL3YDR432W 1245 nt11.08□□□□□ -0.64
RSM28Q03430 MCH5YOR306C 1566 nt11.06□□□□□ -0.64
RSM28Q03430 MNP1YGL068W 585 nt11.05□□□□□ -0.64
RSM28Q03430 SIS1YNL007C 1059 nt11.04□□□□□ -0.64
RSM28Q03430 GUT2YIL155C 1950 nt11.04□□□□□ -0.64
RSM28Q03430 YFL021C-AYFL021C-A 855 nt11□□□□□ -0.65
RSM28Q03430 SCC4YER147C 1875 nt11□□□□□ -0.65
RSM28Q03430 BOR1YNL275W 1731 nt10.99□□□□□ -0.65
RSM28Q03430 YOL037CYOL037C 354 nt10.97□□□□□ -0.65
RSM28Q03430 ART5YGR068C 1761 nt10.95□□□□□ -0.66
RSM28Q03430 IRC15YPL017C 1500 nt10.95□□□□□ -0.66
RSM28Q03430 RKM5YLR137W 1104 nt10.94□□□□□ -0.66
RSM28Q03430 GIS3YLR094C 1509 nt10.93□□□□□ -0.66
RSM28Q03430 RTS2YOR077W 699 nt10.92□□□□□ -0.66
RSM28Q03430 GFD2YCL036W 1701 nt10.9□□□□□ -0.66
RSM28Q03430 RPM1RPM1 483 nt10.89□□□□□ -0.67
RSM28Q03430 SEC11YIR022W 504 nt10.85□□□□□ -0.67
RSM28Q03430 PET9YBL030C 957 nt10.84□□□□□ -0.67
RSM28Q03430 PCH2YBR186W 1695 nt10.84□□□□□ -0.67
RSM28Q03430 YSC84YHR016C 1407 nt10.78□□□□□ -0.68
RSM28Q03430 YCH1YGR203W 447 nt10.76□□□□□ -0.69
RSM28Q03430 YMR057CYMR057C 372 nt10.75□□□□□ -0.69
RSM28Q03430 TIR4YOR009W 1464 nt10.74□□□□□ -0.69
RSM28Q03430 tM(CAU)CtM(CAU)C 72 nt10.74□□□□□ -0.69
RSM28Q03430 IMT4tM(CAU)E 72 nt10.74□□□□□ -0.69
RSM28Q03430 IMT3tM(CAU)J3 72 nt10.74□□□□□ -0.69
RSM28Q03430 IMT1tM(CAU)O1 72 nt10.74□□□□□ -0.69
RSM28Q03430 IMT2tM(CAU)P 72 nt10.74□□□□□ -0.69
RSM28Q03430 CUE1YMR264W 612 nt10.73□□□□□ -0.69
RSM28Q03430 YNL195CYNL195C 786 nt10.73□□□□□ -0.69
RSM28Q03430 YIL100WYIL100W 354 nt10.71□□□□□ -0.69
RSM28Q03430 RRT12YCR045C 1476 nt10.69□□□□□ -0.7
RSM28Q03430 YJL152WYJL152W 360 nt10.69□□□□□ -0.7
RSM28Q03430 YLR281CYLR281C 468 nt10.69□□□□□ -0.7
RSM28Q03430 PIB2YGL023C 1908 nt10.65□□□□□ -0.7
RSM28Q03430 YHL050CYHL050C 2094 nt10.65□□□□□ -0.7
RSM28Q03430 WHI5YOR083W 888 nt10.63□□□□□ -0.71
RSM28Q03430 PUS2YGL063W 1113 nt10.62□□□□□ -0.71
RSM28Q03430 YLR236CYLR236C 324 nt10.62□□□□□ -0.71
RSM28Q03430 YCL048W-AYCL048W-A 240 nt10.58□□□□□ -0.72
RSM28Q03430 ALG12YNR030W 1656 nt10.57□□□□□ -0.72
RSM28Q03430 RTF1YGL244W 1677 nt10.57□□□□□ -0.72
RSM28Q03430 YLR154C-GYLR154C-G 150 nt10.56□□□□□ -0.72
RSM28Q03430 BOP3YNL042W 1191 nt10.52□□□□□ -0.73
RSM28Q03430 IMP2'YIL154C 1041 nt10.45□□□□□ -0.74
RSM28Q03430 DSK2YMR276W 1122 nt10.43□□□□□ -0.74
RSM28Q03430 YPR011CYPR011C 981 nt10.35□□□□□ -0.75
RSM28Q03430 PTK1YKL198C 1989 nt10.35□□□□□ -0.75
RSM28Q03430 FMP45YDL222C 930 nt10.34□□□□□ -0.75
RSM28Q03430 HSL7YBR133C 2484 nt10.31□□□□□ -0.76
RSM28Q03430 DED1YOR204W 1815 nt10.29□□□□□ -0.76
RSM28Q03430 IDH1YNL037C 1083 nt10.29□□□□□ -0.76
RSM28Q03430 GBP2YCL011C 1284 nt10.28□□□□□ -0.76
RSM28Q03430 YFL054CYFL054C 1941 nt10.28□□□□□ -0.76
RSM28Q03430 NAR1YNL240C 1476 nt10.25□□□□□ -0.77
RSM28Q03430 NCP1YHR042W 2076 nt10.25□□□□□ -0.77
RSM28Q03430 HSP60YLR259C 1719 nt10.24□□□□□ -0.77
RSM28Q03430 LCB1YMR296C 1677 nt10.22□□□□□ -0.77
RSM28Q03430 HEL2YDR266C 1920 nt10.21□□□□□ -0.78
RSM28Q03430 RRD1YIL153W 1182 nt10.2□□□□□ -0.78
RSM28Q03430 TCD2YKL027W 1344 nt10.2□□□□□ -0.78
RSM28Q03430 ERV46YAL042W 1248 nt10.2□□□□□ -0.78
RSM28Q03430 SIM1YIL123W 1431 nt10.19□□□□□ -0.78
RSM28Q03430 SSN3YPL042C 1668 nt10.18□□□□□ -0.78
RSM28Q03430 LPX1YOR084W 1164 nt10.17□□□□□ -0.78
RSM28Q03430 PCM1YEL058W 1674 nt10.15□□□□□ -0.79
RSM28Q03430 FMP52YER004W 696 nt10.14□□□□□ -0.79
RSM28Q03430 CMP2YML057W 1815 nt10.14□□□□□ -0.79
RSM28Q03430 YDR433WYDR433W 441 nt10.13□□□□□ -0.79
RSM28Q03430 CWP1YKL096W 720 nt10.12□□□□□ -0.79
RSM28Q03430 RDN25-1RDN25-1 3396 nt10.11□□□□□ -0.79
RSM28Q03430 RDN25-2RDN25-2 3396 nt10.11□□□□□ -0.79
RSM28Q03430 SPT8YLR055C 1809 nt10.1□□□□□ -0.79
RSM28Q03430 YKR040CYKR040C 504 nt10.1□□□□□ -0.79
RSM28Q03430 MET2YNL277W 1461 nt10.1□□□□□ -0.79
RSM28Q03430 SFP1YLR403W 2052 nt10.09□□□□□ -0.79
RSM28Q03430 YAT1YAR035W 2064 nt10.08□□□□□ -0.8
RSM28Q03430 SNF6YHL025W 999 nt10.08□□□□□ -0.8
RSM28Q03430 ADH2YMR303C 1047 nt10.07□□□□□ -0.8
RSM28Q03430 NPP1YCR026C 2229 nt10.06□□□□□ -0.8
RSM28Q03430 GID7YCL039W 2238 nt10.06□□□□□ -0.8
RSM28Q03430 MRPL8YJL063C 717 nt10.06□□□□□ -0.8
RSM28Q03430 FMT1YBL013W 1206 nt10.06□□□□□ -0.8
RSM28Q03430 MXR2YCL033C 507 nt10.02□□□□□ -0.81
RSM28Q03430 YCL042WYCL042W 360 nt10.02□□□□□ -0.81
RSM28Q03430 BIO4YNR057C 714 nt10.01□□□□□ -0.81
RSM28Q03430 SPP1YPL138C 1062 nt10.01□□□□□ -0.81
RSM28Q03430 LYS4YDR234W 2082 nt9.95□□□□□ -0.82
RSM28Q03430 ADO1YJR105W 1023 nt9.94□□□□□ -0.82
RSM28Q03430 SWE1YJL187C 2460 nt9.94□□□□□ -0.82
RSM28Q03430 RTG1YOL067C 534 nt9.92□□□□□ -0.82
RSM28Q03430 YEL076C-AYEL076C-A 651 nt9.91□□□□□ -0.82
RSM28Q03430 YEL076CYEL076C 651 nt9.91□□□□□ -0.82
RSM28Q03430 ERF2YLR246W 1080 nt9.91□□□□□ -0.82
RSM28Q03430 YLR464WYLR464W 651 nt9.91□□□□□ -0.82
Retrieved 100 of 7,029 protein–RNA pairs in 12.8 ms