Protein–RNA interactions for Protein: Q03308

VPS16, Vacuolar protein sorting-associated protein 16, yeastyeast

Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VPS16Q03308 SEC11YIR022W 504 nt12.53□□□□□ -0.4
VPS16Q03308 LSM3YLR438C-A 270 nt12.52□□□□□ -0.41
VPS16Q03308 SUF2tP(AGG)C 72 nt12.51□□□□□ -0.41
VPS16Q03308 SUF10tP(AGG)N 72 nt12.51□□□□□ -0.41
VPS16Q03308 ART5YGR068C 1761 nt12.46□□□□□ -0.41
VPS16Q03308 GFD2YCL036W 1701 nt12.46□□□□□ -0.41
VPS16Q03308 RTS2YOR077W 699 nt12.44□□□□□ -0.42
VPS16Q03308 YSC84YHR016C 1407 nt12.42□□□□□ -0.42
VPS16Q03308 SHU1YHL006C 453 nt12.4□□□□□ -0.42
VPS16Q03308 YFL021C-AYFL021C-A 855 nt12.33□□□□□ -0.44
VPS16Q03308 YHL050CYHL050C 2094 nt12.33□□□□□ -0.44
VPS16Q03308 PIB2YGL023C 1908 nt12.32□□□□□ -0.44
VPS16Q03308 PET9YBL030C 957 nt12.31□□□□□ -0.44
VPS16Q03308 YGR021WYGR021W 873 nt12.27□□□□□ -0.45
VPS16Q03308 RRT12YCR045C 1476 nt12.27□□□□□ -0.45
VPS16Q03308 CUE1YMR264W 612 nt12.25□□□□□ -0.45
VPS16Q03308 RTF1YGL244W 1677 nt12.23□□□□□ -0.45
VPS16Q03308 TIR4YOR009W 1464 nt12.21□□□□□ -0.45
VPS16Q03308 HOM6YJR139C 1080 nt12.21□□□□□ -0.45
VPS16Q03308 YCH1YGR203W 447 nt12.19□□□□□ -0.46
VPS16Q03308 YAL037C-BYAL037C-B 975 nt12.17□□□□□ -0.46
VPS16Q03308 YNL195CYNL195C 786 nt12.17□□□□□ -0.46
VPS16Q03308 YMR057CYMR057C 372 nt12.15□□□□□ -0.46
VPS16Q03308 NVJ2YPR091C 2313 nt12.15□□□□□ -0.46
VPS16Q03308 YIL100WYIL100W 354 nt12.13□□□□□ -0.47
VPS16Q03308 BOP3YNL042W 1191 nt12.13□□□□□ -0.47
VPS16Q03308 MNP1YGL068W 585 nt12.11□□□□□ -0.47
VPS16Q03308 FPS1YLL043W 2010 nt12.06□□□□□ -0.48
VPS16Q03308 PTK1YKL198C 1989 nt12.06□□□□□ -0.48
VPS16Q03308 NME1NME1 340 nt12.05□□□□□ -0.48
VPS16Q03308 RKM5YLR137W 1104 nt12.04□□□□□ -0.48
VPS16Q03308 YLR236CYLR236C 324 nt12.01□□□□□ -0.49
VPS16Q03308 YOR139CYOR139C 393 nt11.94□□□□□ -0.5
VPS16Q03308 NCP1YHR042W 2076 nt11.93□□□□□ -0.5
VPS16Q03308 NPL3YDR432W 1245 nt11.92□□□□□ -0.5
VPS16Q03308 YJL152WYJL152W 360 nt11.91□□□□□ -0.5
VPS16Q03308 YCL048W-AYCL048W-A 240 nt11.87□□□□□ -0.51
VPS16Q03308 YFL054CYFL054C 1941 nt11.84□□□□□ -0.51
VPS16Q03308 YOL037CYOL037C 354 nt11.83□□□□□ -0.52
VPS16Q03308 YLR154C-GYLR154C-G 150 nt11.82□□□□□ -0.52
VPS16Q03308 LCB1YMR296C 1677 nt11.76□□□□□ -0.53
VPS16Q03308 SPT8YLR055C 1809 nt11.74□□□□□ -0.53
VPS16Q03308 BOR1YNL275W 1731 nt11.67□□□□□ -0.54
VPS16Q03308 RRD1YIL153W 1182 nt11.58□□□□□ -0.56
VPS16Q03308 SIM1YIL123W 1431 nt11.56□□□□□ -0.56
VPS16Q03308 SWE1YJL187C 2460 nt11.52□□□□□ -0.56
VPS16Q03308 YLR281CYLR281C 468 nt11.52□□□□□ -0.57
VPS16Q03308 PCM1YEL058W 1674 nt11.51□□□□□ -0.57
VPS16Q03308 LYS4YDR234W 2082 nt11.51□□□□□ -0.57
VPS16Q03308 FMP52YER004W 696 nt11.5□□□□□ -0.57
VPS16Q03308 tM(CAU)CtM(CAU)C 72 nt11.5□□□□□ -0.57
VPS16Q03308 IMT4tM(CAU)E 72 nt11.5□□□□□ -0.57
VPS16Q03308 IMT3tM(CAU)J3 72 nt11.5□□□□□ -0.57
VPS16Q03308 IMT1tM(CAU)O1 72 nt11.5□□□□□ -0.57
VPS16Q03308 IMT2tM(CAU)P 72 nt11.5□□□□□ -0.57
VPS16Q03308 GBP2YCL011C 1284 nt11.48□□□□□ -0.57
VPS16Q03308 IDH1YNL037C 1083 nt11.47□□□□□ -0.57
VPS16Q03308 WHI5YOR083W 888 nt11.47□□□□□ -0.57
VPS16Q03308 DED1YOR204W 1815 nt11.46□□□□□ -0.58
VPS16Q03308 TCD2YKL027W 1344 nt11.43□□□□□ -0.58
VPS16Q03308 PUS2YGL063W 1113 nt11.43□□□□□ -0.58
VPS16Q03308 HSP60YLR259C 1719 nt11.42□□□□□ -0.58
VPS16Q03308 FMT1YBL013W 1206 nt11.41□□□□□ -0.58
VPS16Q03308 BIO4YNR057C 714 nt11.41□□□□□ -0.58
VPS16Q03308 CWP1YKL096W 720 nt11.38□□□□□ -0.59
VPS16Q03308 ADH2YMR303C 1047 nt11.38□□□□□ -0.59
VPS16Q03308 SNF6YHL025W 999 nt11.37□□□□□ -0.59
VPS16Q03308 UME6YDR207C 2511 nt11.34□□□□□ -0.59
VPS16Q03308 GLK1YCL040W 1503 nt11.3□□□□□ -0.6
VPS16Q03308 IMP2'YIL154C 1041 nt11.29□□□□□ -0.6
VPS16Q03308 ERF2YLR246W 1080 nt11.27□□□□□ -0.61
VPS16Q03308 FRE6YLL051C 2139 nt11.26□□□□□ -0.61
VPS16Q03308 CRR1YLR213C 1269 nt11.25□□□□□ -0.61
VPS16Q03308 DSK2YMR276W 1122 nt11.24□□□□□ -0.61
VPS16Q03308 YDR433WYDR433W 441 nt11.23□□□□□ -0.61
VPS16Q03308 YHR056W-AYHR056W-A 435 nt11.23□□□□□ -0.61
VPS16Q03308 ALG12YNR030W 1656 nt11.22□□□□□ -0.61
VPS16Q03308 FUR4YBR021W 1902 nt11.22□□□□□ -0.61
VPS16Q03308 MXR2YCL033C 507 nt11.22□□□□□ -0.61
VPS16Q03308 SOR2YDL246C 1074 nt11.19□□□□□ -0.62
VPS16Q03308 SOR1YJR159W 1074 nt11.19□□□□□ -0.62
VPS16Q03308 YCL042WYCL042W 360 nt11.18□□□□□ -0.62
VPS16Q03308 MCH5YOR306C 1566 nt11.17□□□□□ -0.62
VPS16Q03308 YIH1YCR059C 777 nt11.17□□□□□ -0.62
VPS16Q03308 YLL053CYLL053C 459 nt11.17□□□□□ -0.62
VPS16Q03308 MIC10YCL057C-A 294 nt11.17□□□□□ -0.62
VPS16Q03308 HEM12YDR047W 1089 nt11.16□□□□□ -0.62
VPS16Q03308 CCA1YER168C 1641 nt11.15□□□□□ -0.62
VPS16Q03308 FMP45YDL222C 930 nt11.14□□□□□ -0.63
VPS16Q03308 YJL225CYJL225C 5277 nt11.14□□□□□ -0.63
VPS16Q03308 ATF2YGR177C 1608 nt11.13□□□□□ -0.63
VPS16Q03308 RAX1YOR301W 1308 nt11.13□□□□□ -0.63
VPS16Q03308 YPR011CYPR011C 981 nt11.11□□□□□ -0.63
VPS16Q03308 RNQ1YCL028W 1218 nt11.11□□□□□ -0.63
VPS16Q03308 RDN37-1RDN37-1 5354 nt11.1□□□□□ -0.63
VPS16Q03308 RDN37-2RDN37-2 5354 nt11.1□□□□□ -0.63
VPS16Q03308 SNG1YGR197C 1644 nt11.09□□□□□ -0.63
VPS16Q03308 PRP4YPR178W 1398 nt11.09□□□□□ -0.63
VPS16Q03308 YFL067WYFL067W 528 nt11.05□□□□□ -0.64
VPS16Q03308 FRD1YEL047C 1413 nt11.04□□□□□ -0.64
Retrieved 100 of 7,029 protein–RNA pairs in 16.9 ms