Protein–RNA interactions for Protein: Q02767

VPS28, Vacuolar protein sorting-associated protein 28, yeastyeast

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VPS28Q02767 PCH2YBR186W 1695 nt10.42□□□□□ -0.74
VPS28Q02767 YFL021C-AYFL021C-A 855 nt10.42□□□□□ -0.74
VPS28Q02767 SEC11YIR022W 504 nt10.42□□□□□ -0.74
VPS28Q02767 GFD2YCL036W 1701 nt10.39□□□□□ -0.75
VPS28Q02767 YGR021WYGR021W 873 nt10.39□□□□□ -0.75
VPS28Q02767 YJL225CYJL225C 5277 nt10.39□□□□□ -0.75
VPS28Q02767 GUT2YIL155C 1950 nt10.39□□□□□ -0.75
VPS28Q02767 ART5YGR068C 1761 nt10.39□□□□□ -0.75
VPS28Q02767 HOM6YJR139C 1080 nt10.33□□□□□ -0.76
VPS28Q02767 PET9YBL030C 957 nt10.32□□□□□ -0.76
VPS28Q02767 SHU1YHL006C 453 nt10.3□□□□□ -0.76
VPS28Q02767 RTS2YOR077W 699 nt10.3□□□□□ -0.76
VPS28Q02767 YSC84YHR016C 1407 nt10.28□□□□□ -0.76
VPS28Q02767 YCH1YGR203W 447 nt10.25□□□□□ -0.77
VPS28Q02767 YAL037C-BYAL037C-B 975 nt10.25□□□□□ -0.77
VPS28Q02767 CUE1YMR264W 612 nt10.25□□□□□ -0.77
VPS28Q02767 YHL050CYHL050C 2094 nt10.24□□□□□ -0.77
VPS28Q02767 PIB2YGL023C 1908 nt10.23□□□□□ -0.77
VPS28Q02767 TIR4YOR009W 1464 nt10.22□□□□□ -0.77
VPS28Q02767 MNP1YGL068W 585 nt10.19□□□□□ -0.78
VPS28Q02767 RKM5YLR137W 1104 nt10.18□□□□□ -0.78
VPS28Q02767 RRT12YCR045C 1476 nt10.17□□□□□ -0.78
VPS28Q02767 RTF1YGL244W 1677 nt10.14□□□□□ -0.79
VPS28Q02767 YMR057CYMR057C 372 nt10.13□□□□□ -0.79
VPS28Q02767 YNL195CYNL195C 786 nt10.11□□□□□ -0.79
VPS28Q02767 YIL100WYIL100W 354 nt10.1□□□□□ -0.79
VPS28Q02767 RDN37-1RDN37-1 5354 nt10.08□□□□□ -0.8
VPS28Q02767 RDN37-2RDN37-2 5354 nt10.08□□□□□ -0.8
VPS28Q02767 NPL3YDR432W 1245 nt10.06□□□□□ -0.8
VPS28Q02767 BOP3YNL042W 1191 nt10.06□□□□□ -0.8
VPS28Q02767 YLR236CYLR236C 324 nt10.04□□□□□ -0.8
VPS28Q02767 UME6YDR207C 2511 nt10.01□□□□□ -0.81
VPS28Q02767 PTK1YKL198C 1989 nt10□□□□□ -0.81
VPS28Q02767 YKL097CYKL097C 411 nt9.98□□□□□ -0.81
VPS28Q02767 YLR154C-GYLR154C-G 150 nt9.96□□□□□ -0.82
VPS28Q02767 NCP1YHR042W 2076 nt9.95□□□□□ -0.82
VPS28Q02767 YJL152WYJL152W 360 nt9.95□□□□□ -0.82
VPS28Q02767 YCL048W-AYCL048W-A 240 nt9.92□□□□□ -0.82
VPS28Q02767 YOL037CYOL037C 354 nt9.89□□□□□ -0.83
VPS28Q02767 LCB1YMR296C 1677 nt9.79□□□□□ -0.84
VPS28Q02767 YFL054CYFL054C 1941 nt9.78□□□□□ -0.84
VPS28Q02767 SPT8YLR055C 1809 nt9.73□□□□□ -0.85
VPS28Q02767 RRD1YIL153W 1182 nt9.73□□□□□ -0.85
VPS28Q02767 BOR1YNL275W 1731 nt9.71□□□□□ -0.85
VPS28Q02767 WHI5YOR083W 888 nt9.71□□□□□ -0.86
VPS28Q02767 FMP52YER004W 696 nt9.69□□□□□ -0.86
VPS28Q02767 YLR281CYLR281C 468 nt9.69□□□□□ -0.86
VPS28Q02767 IDH1YNL037C 1083 nt9.67□□□□□ -0.86
VPS28Q02767 YOR139CYOR139C 393 nt9.67□□□□□ -0.86
VPS28Q02767 DED1YOR204W 1815 nt9.64□□□□□ -0.87
VPS28Q02767 GBP2YCL011C 1284 nt9.64□□□□□ -0.87
VPS28Q02767 PCM1YEL058W 1674 nt9.64□□□□□ -0.87
VPS28Q02767 SIM1YIL123W 1431 nt9.62□□□□□ -0.87
VPS28Q02767 LYS4YDR234W 2082 nt9.61□□□□□ -0.87
VPS28Q02767 TCD2YKL027W 1344 nt9.6□□□□□ -0.87
VPS28Q02767 FMT1YBL013W 1206 nt9.59□□□□□ -0.87
VPS28Q02767 MCH5YOR306C 1566 nt9.58□□□□□ -0.88
VPS28Q02767 SWE1YJL187C 2460 nt9.55□□□□□ -0.88
VPS28Q02767 BIO4YNR057C 714 nt9.54□□□□□ -0.88
VPS28Q02767 SNF6YHL025W 999 nt9.52□□□□□ -0.89
VPS28Q02767 IMP2'YIL154C 1041 nt9.52□□□□□ -0.89
VPS28Q02767 ADH2YMR303C 1047 nt9.52□□□□□ -0.89
VPS28Q02767 CWP1YKL096W 720 nt9.51□□□□□ -0.89
VPS28Q02767 DSK2YMR276W 1122 nt9.47□□□□□ -0.89
VPS28Q02767 SOR2YDL246C 1074 nt9.46□□□□□ -0.9
VPS28Q02767 SOR1YJR159W 1074 nt9.46□□□□□ -0.9
VPS28Q02767 YDR433WYDR433W 441 nt9.44□□□□□ -0.9
VPS28Q02767 ERF2YLR246W 1080 nt9.44□□□□□ -0.9
VPS28Q02767 PUS2YGL063W 1113 nt9.43□□□□□ -0.9
VPS28Q02767 CRR1YLR213C 1269 nt9.42□□□□□ -0.9
VPS28Q02767 MXR2YCL033C 507 nt9.42□□□□□ -0.9
VPS28Q02767 HSP60YLR259C 1719 nt9.42□□□□□ -0.9
VPS28Q02767 YIH1YCR059C 777 nt9.41□□□□□ -0.9
VPS28Q02767 FMP45YDL222C 930 nt9.41□□□□□ -0.9
VPS28Q02767 YCL042WYCL042W 360 nt9.39□□□□□ -0.91
VPS28Q02767 YPR011CYPR011C 981 nt9.38□□□□□ -0.91
VPS28Q02767 ALG12YNR030W 1656 nt9.37□□□□□ -0.91
VPS28Q02767 YHR056W-AYHR056W-A 435 nt9.36□□□□□ -0.91
VPS28Q02767 ERV46YAL042W 1248 nt9.35□□□□□ -0.91
VPS28Q02767 YLL053CYLL053C 459 nt9.35□□□□□ -0.91
VPS28Q02767 RNQ1YCL028W 1218 nt9.35□□□□□ -0.91
VPS28Q02767 tM(CAU)CtM(CAU)C 72 nt9.34□□□□□ -0.91
VPS28Q02767 IMT4tM(CAU)E 72 nt9.34□□□□□ -0.91
VPS28Q02767 IMT3tM(CAU)J3 72 nt9.34□□□□□ -0.91
VPS28Q02767 IMT1tM(CAU)O1 72 nt9.34□□□□□ -0.91
VPS28Q02767 IMT2tM(CAU)P 72 nt9.34□□□□□ -0.91
VPS28Q02767 HEM12YDR047W 1089 nt9.33□□□□□ -0.92
VPS28Q02767 FRD1YEL047C 1413 nt9.32□□□□□ -0.92
VPS28Q02767 GLK1YCL040W 1503 nt9.32□□□□□ -0.92
VPS28Q02767 ATF2YGR177C 1608 nt9.31□□□□□ -0.92
VPS28Q02767 YKR040CYKR040C 504 nt9.31□□□□□ -0.92
VPS28Q02767 MIC10YCL057C-A 294 nt9.31□□□□□ -0.92
VPS28Q02767 LPX1YOR084W 1164 nt9.29□□□□□ -0.92
VPS28Q02767 YFL067WYFL067W 528 nt9.28□□□□□ -0.92
VPS28Q02767 FUR4YBR021W 1902 nt9.28□□□□□ -0.92
VPS28Q02767 RAX1YOR301W 1308 nt9.28□□□□□ -0.92
VPS28Q02767 SNG1YGR197C 1644 nt9.27□□□□□ -0.92
VPS28Q02767 CCA1YER168C 1641 nt9.27□□□□□ -0.93
VPS28Q02767 FTR1YER145C 1215 nt9.26□□□□□ -0.93
VPS28Q02767 GAL1YBR020W 1587 nt9.23□□□□□ -0.93
Retrieved 100 of 7,029 protein–RNA pairs in 9.9 ms