Protein–RNA interactions for Protein: Q00362

CDC55, Protein phosphatase PP2A regulatory subunit B, yeastyeast

Predictions only

Length 526 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CDC55Q00362 EMI2YDR516C 1503 nt12.74□□□□□ -0.37
CDC55Q00362 YLR281CYLR281C 468 nt12.74□□□□□ -0.37
CDC55Q00362 YLR154C-GYLR154C-G 150 nt12.73□□□□□ -0.37
CDC55Q00362 ART5YGR068C 1761 nt12.72□□□□□ -0.37
CDC55Q00362 WHI5YOR083W 888 nt12.72□□□□□ -0.37
CDC55Q00362 TIR4YOR009W 1464 nt12.68□□□□□ -0.38
CDC55Q00362 tM(CAU)CtM(CAU)C 72 nt12.66□□□□□ -0.38
CDC55Q00362 IMT4tM(CAU)E 72 nt12.66□□□□□ -0.38
CDC55Q00362 IMT3tM(CAU)J3 72 nt12.66□□□□□ -0.38
CDC55Q00362 IMT1tM(CAU)O1 72 nt12.66□□□□□ -0.38
CDC55Q00362 IMT2tM(CAU)P 72 nt12.66□□□□□ -0.38
CDC55Q00362 YJL152WYJL152W 360 nt12.66□□□□□ -0.38
CDC55Q00362 GFD2YCL036W 1701 nt12.65□□□□□ -0.38
CDC55Q00362 YDL221WYDL221W 552 nt12.64□□□□□ -0.39
CDC55Q00362 YMR090WYMR090W 684 nt12.64□□□□□ -0.39
CDC55Q00362 PET9YBL030C 957 nt12.63□□□□□ -0.39
CDC55Q00362 PUS2YGL063W 1113 nt12.61□□□□□ -0.39
CDC55Q00362 YCH1YGR203W 447 nt12.6□□□□□ -0.39
CDC55Q00362 IRC15YPL017C 1500 nt12.57□□□□□ -0.4
CDC55Q00362 YMR057CYMR057C 372 nt12.56□□□□□ -0.4
CDC55Q00362 RTS2YOR077W 699 nt12.53□□□□□ -0.4
CDC55Q00362 YBR220CYBR220C 1683 nt12.51□□□□□ -0.41
CDC55Q00362 SDH1YKL148C 1923 nt12.49□□□□□ -0.41
CDC55Q00362 GIS3YLR094C 1509 nt12.47□□□□□ -0.41
CDC55Q00362 NME1NME1 340 nt12.45□□□□□ -0.42
CDC55Q00362 DSK2YMR276W 1122 nt12.44□□□□□ -0.42
CDC55Q00362 SCC4YER147C 1875 nt12.42□□□□□ -0.42
CDC55Q00362 YPR011CYPR011C 981 nt12.42□□□□□ -0.42
CDC55Q00362 IMP2'YIL154C 1041 nt12.41□□□□□ -0.42
CDC55Q00362 YLR236CYLR236C 324 nt12.4□□□□□ -0.42
CDC55Q00362 YCL048W-AYCL048W-A 240 nt12.4□□□□□ -0.42
CDC55Q00362 FPS1YLL043W 2010 nt12.39□□□□□ -0.43
CDC55Q00362 CUE1YMR264W 612 nt12.39□□□□□ -0.43
CDC55Q00362 IDH1YNL037C 1083 nt12.39□□□□□ -0.43
CDC55Q00362 BDF1YLR399C 2061 nt12.35□□□□□ -0.43
CDC55Q00362 GBP2YCL011C 1284 nt12.32□□□□□ -0.44
CDC55Q00362 FMP45YDL222C 930 nt12.29□□□□□ -0.44
CDC55Q00362 YIL100WYIL100W 354 nt12.25□□□□□ -0.45
CDC55Q00362 YDR433WYDR433W 441 nt12.24□□□□□ -0.45
CDC55Q00362 LPX1YOR084W 1164 nt12.21□□□□□ -0.45
CDC55Q00362 TAT1YBR069C 1860 nt12.19□□□□□ -0.46
CDC55Q00362 ERV46YAL042W 1248 nt12.18□□□□□ -0.46
CDC55Q00362 TCD2YKL027W 1344 nt12.17□□□□□ -0.46
CDC55Q00362 RRD1YIL153W 1182 nt12.17□□□□□ -0.46
CDC55Q00362 MXR2YCL033C 507 nt12.17□□□□□ -0.46
CDC55Q00362 DED1YOR204W 1815 nt12.14□□□□□ -0.47
CDC55Q00362 YSC84YHR016C 1407 nt12.12□□□□□ -0.47
CDC55Q00362 RRT12YCR045C 1476 nt12.11□□□□□ -0.47
CDC55Q00362 YKR040CYKR040C 504 nt12.11□□□□□ -0.47
CDC55Q00362 YNL195CYNL195C 786 nt12.1□□□□□ -0.47
CDC55Q00362 YHL050CYHL050C 2094 nt12.06□□□□□ -0.48
CDC55Q00362 SEC11YIR022W 504 nt12.05□□□□□ -0.48
CDC55Q00362 YGR139WYGR139W 339 nt12.04□□□□□ -0.48
CDC55Q00362 FMT1YBL013W 1206 nt12.04□□□□□ -0.48
CDC55Q00362 FMP52YER004W 696 nt11.99□□□□□ -0.49
CDC55Q00362 PCH2YBR186W 1695 nt11.99□□□□□ -0.49
CDC55Q00362 SPP1YPL138C 1062 nt11.98□□□□□ -0.49
CDC55Q00362 FRD1YEL047C 1413 nt11.94□□□□□ -0.5
CDC55Q00362 CWP1YKL096W 720 nt11.93□□□□□ -0.5
CDC55Q00362 YCL042WYCL042W 360 nt11.93□□□□□ -0.5
CDC55Q00362 GUT2YIL155C 1950 nt11.92□□□□□ -0.5
CDC55Q00362 SOR2YDL246C 1074 nt11.91□□□□□ -0.5
CDC55Q00362 SOR1YJR159W 1074 nt11.91□□□□□ -0.5
CDC55Q00362 ADH2YMR303C 1047 nt11.91□□□□□ -0.5
CDC55Q00362 PCM1YEL058W 1674 nt11.9□□□□□ -0.5
CDC55Q00362 SNF6YHL025W 999 nt11.83□□□□□ -0.52
CDC55Q00362 LCB1YMR296C 1677 nt11.75□□□□□ -0.53
CDC55Q00362 PTH1YHR189W 573 nt11.75□□□□□ -0.53
CDC55Q00362 PIB2YGL023C 1908 nt11.75□□□□□ -0.53
CDC55Q00362 SIM1YIL123W 1431 nt11.74□□□□□ -0.53
CDC55Q00362 RTF1YGL244W 1677 nt11.73□□□□□ -0.53
CDC55Q00362 NCP1YHR042W 2076 nt11.71□□□□□ -0.53
CDC55Q00362 BOP3YNL042W 1191 nt11.71□□□□□ -0.53
CDC55Q00362 YIH1YCR059C 777 nt11.69□□□□□ -0.54
CDC55Q00362 BIO4YNR057C 714 nt11.69□□□□□ -0.54
CDC55Q00362 RNQ1YCL028W 1218 nt11.68□□□□□ -0.54
CDC55Q00362 RTG1YOL067C 534 nt11.67□□□□□ -0.54
CDC55Q00362 YLR235CYLR235C 399 nt11.66□□□□□ -0.54
CDC55Q00362 DIC1YLR348C 897 nt11.66□□□□□ -0.54
CDC55Q00362 YLL053CYLL053C 459 nt11.62□□□□□ -0.55
CDC55Q00362 YKL030WYKL030W 606 nt11.59□□□□□ -0.55
CDC55Q00362 YEL076C-AYEL076C-A 651 nt11.57□□□□□ -0.56
CDC55Q00362 YEL076CYEL076C 651 nt11.57□□□□□ -0.56
CDC55Q00362 MRPL8YJL063C 717 nt11.57□□□□□ -0.56
CDC55Q00362 YLR464WYLR464W 651 nt11.57□□□□□ -0.56
CDC55Q00362 PTK1YKL198C 1989 nt11.57□□□□□ -0.56
CDC55Q00362 TIM23YNR017W 669 nt11.56□□□□□ -0.56
CDC55Q00362 FTR1YER145C 1215 nt11.51□□□□□ -0.57
CDC55Q00362 YLR179CYLR179C 606 nt11.51□□□□□ -0.57
CDC55Q00362 LYS4YDR234W 2082 nt11.5□□□□□ -0.57
CDC55Q00362 ERF2YLR246W 1080 nt11.5□□□□□ -0.57
CDC55Q00362 ADO1YJR105W 1023 nt11.49□□□□□ -0.57
CDC55Q00362 GAL1YBR020W 1587 nt11.49□□□□□ -0.57
CDC55Q00362 TRM5YHR070W 1500 nt11.47□□□□□ -0.57
CDC55Q00362 ATF2YGR177C 1608 nt11.46□□□□□ -0.57
CDC55Q00362 HUA1YGR268C 597 nt11.45□□□□□ -0.58
CDC55Q00362 CRR1YLR213C 1269 nt11.45□□□□□ -0.58
CDC55Q00362 YFL067WYFL067W 528 nt11.41□□□□□ -0.58
CDC55Q00362 DDR2YOL052C-A 186 nt11.41□□□□□ -0.58
CDC55Q00362 AQY1YPR192W 918 nt11.41□□□□□ -0.58
Retrieved 100 of 7,029 protein–RNA pairs in 14.3 ms