Protein–RNA interactions for Protein: P47061

VPS53, Vacuolar protein sorting-associated protein 53, yeastyeast

Predictions only

Length 822 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VPS53P47061 SUF2tP(AGG)C 72 nt13.69□□□□□ -0.22
VPS53P47061 SUF10tP(AGG)N 72 nt13.69□□□□□ -0.22
VPS53P47061 YPR011CYPR011C 981 nt13.68□□□□□ -0.22
VPS53P47061 MRPL8YJL063C 717 nt13.67□□□□□ -0.22
VPS53P47061 YLR236CYLR236C 324 nt13.67□□□□□ -0.22
VPS53P47061 ALF1YNL148C 765 nt13.64□□□□□ -0.23
VPS53P47061 YPS1YLR120C 1710 nt13.62□□□□□ -0.23
VPS53P47061 YDR095CYDR095C 411 nt13.59□□□□□ -0.23
VPS53P47061 YJL152WYJL152W 360 nt13.53□□□□□ -0.24
VPS53P47061 ADO1YJR105W 1023 nt13.49□□□□□ -0.25
VPS53P47061 IDH1YNL037C 1083 nt13.47□□□□□ -0.25
VPS53P47061 YHR165W-AYHR165W-A 312 nt13.45□□□□□ -0.26
VPS53P47061 ERV46YAL042W 1248 nt13.45□□□□□ -0.26
VPS53P47061 SIS1YNL007C 1059 nt13.44□□□□□ -0.26
VPS53P47061 BDF1YLR399C 2061 nt13.44□□□□□ -0.26
VPS53P47061 LPX1YOR084W 1164 nt13.43□□□□□ -0.26
VPS53P47061 YEL076C-AYEL076C-A 651 nt13.38□□□□□ -0.27
VPS53P47061 YEL076CYEL076C 651 nt13.38□□□□□ -0.27
VPS53P47061 YLR464WYLR464W 651 nt13.38□□□□□ -0.27
VPS53P47061 YDR433WYDR433W 441 nt13.35□□□□□ -0.27
VPS53P47061 Q0182Q0182 405 nt13.35□□□□□ -0.27
VPS53P47061 RPP2AYOL039W 321 nt13.32□□□□□ -0.28
VPS53P47061 MEP2YNL142W 1500 nt13.32□□□□□ -0.28
VPS53P47061 YKR040CYKR040C 504 nt13.31□□□□□ -0.28
VPS53P47061 SPP1YPL138C 1062 nt13.3□□□□□ -0.28
VPS53P47061 TIR4YOR009W 1464 nt13.28□□□□□ -0.28
VPS53P47061 RTG1YOL067C 534 nt13.26□□□□□ -0.29
VPS53P47061 GBP2YCL011C 1284 nt13.26□□□□□ -0.29
VPS53P47061 PTP1YDL230W 1008 nt13.25□□□□□ -0.29
VPS53P47061 TAT1YBR069C 1860 nt13.23□□□□□ -0.29
VPS53P47061 UBX6YJL048C 1191 nt13.2□□□□□ -0.3
VPS53P47061 ART5YGR068C 1761 nt13.19□□□□□ -0.3
VPS53P47061 PET9YBL030C 957 nt13.17□□□□□ -0.3
VPS53P47061 CAC2YML102W 1407 nt13.14□□□□□ -0.31
VPS53P47061 HUA1YGR268C 597 nt13.12□□□□□ -0.31
VPS53P47061 MXR2YCL033C 507 nt13.12□□□□□ -0.31
VPS53P47061 YCL048W-AYCL048W-A 240 nt13.12□□□□□ -0.31
VPS53P47061 GFD2YCL036W 1701 nt13.12□□□□□ -0.31
VPS53P47061 DCW1YKL046C 1350 nt13.09□□□□□ -0.31
VPS53P47061 YMR057CYMR057C 372 nt13.09□□□□□ -0.31
VPS53P47061 TCD2YKL027W 1344 nt13.07□□□□□ -0.32
VPS53P47061 PAC11YDR488C 1602 nt13.05□□□□□ -0.32
VPS53P47061 YDR094WYDR094W 336 nt12.98□□□□□ -0.33
VPS53P47061 EMI2YDR516C 1503 nt12.97□□□□□ -0.33
VPS53P47061 FPS1YLL043W 2010 nt12.9□□□□□ -0.34
VPS53P47061 YDL221WYDL221W 552 nt12.9□□□□□ -0.34
VPS53P47061 RTS2YOR077W 699 nt12.9□□□□□ -0.34
VPS53P47061 FRD1YEL047C 1413 nt12.89□□□□□ -0.35
VPS53P47061 IRC15YPL017C 1500 nt12.89□□□□□ -0.35
VPS53P47061 YMR090WYMR090W 684 nt12.87□□□□□ -0.35
VPS53P47061 YCL042WYCL042W 360 nt12.85□□□□□ -0.35
VPS53P47061 DED1YOR204W 1815 nt12.84□□□□□ -0.35
VPS53P47061 YBR220CYBR220C 1683 nt12.83□□□□□ -0.35
VPS53P47061 RRD1YIL153W 1182 nt12.83□□□□□ -0.36
VPS53P47061 YLR235CYLR235C 399 nt12.82□□□□□ -0.36
VPS53P47061 CUE1YMR264W 612 nt12.82□□□□□ -0.36
VPS53P47061 YKL030WYKL030W 606 nt12.81□□□□□ -0.36
VPS53P47061 YFL015W-AYFL015W-A 318 nt12.78□□□□□ -0.36
VPS53P47061 PTH1YHR189W 573 nt12.78□□□□□ -0.36
VPS53P47061 GIS3YLR094C 1509 nt12.78□□□□□ -0.36
VPS53P47061 SOR2YDL246C 1074 nt12.76□□□□□ -0.37
VPS53P47061 SOR1YJR159W 1074 nt12.76□□□□□ -0.37
VPS53P47061 FMT1YBL013W 1206 nt12.69□□□□□ -0.38
VPS53P47061 SDH1YKL148C 1923 nt12.68□□□□□ -0.38
VPS53P47061 FMP52YER004W 696 nt12.67□□□□□ -0.38
VPS53P47061 LCB1YMR296C 1677 nt12.67□□□□□ -0.38
VPS53P47061 NVJ2YPR091C 2313 nt12.66□□□□□ -0.38
VPS53P47061 SCC4YER147C 1875 nt12.65□□□□□ -0.38
VPS53P47061 YIL100WYIL100W 354 nt12.65□□□□□ -0.38
VPS53P47061 CWP1YKL096W 720 nt12.56□□□□□ -0.4
VPS53P47061 PCH2YBR186W 1695 nt12.55□□□□□ -0.4
VPS53P47061 tL(GAG)GtL(GAG)G 82 nt12.54□□□□□ -0.4
VPS53P47061 GUT2YIL155C 1950 nt12.52□□□□□ -0.4
VPS53P47061 TIM23YNR017W 669 nt12.52□□□□□ -0.41
VPS53P47061 YFR018CYFR018C 1092 nt12.51□□□□□ -0.41
VPS53P47061 RRT5YFR032C 870 nt12.5□□□□□ -0.41
VPS53P47061 PAU16YKL224C 372 nt12.49□□□□□ -0.41
VPS53P47061 ADH2YMR303C 1047 nt12.49□□□□□ -0.41
VPS53P47061 DIC1YLR348C 897 nt12.47□□□□□ -0.41
VPS53P47061 SEC11YIR022W 504 nt12.44□□□□□ -0.42
VPS53P47061 YPR064WYPR064W 420 nt12.43□□□□□ -0.42
VPS53P47061 PCM1YEL058W 1674 nt12.42□□□□□ -0.42
VPS53P47061 SNF6YHL025W 999 nt12.42□□□□□ -0.42
VPS53P47061 YLR179CYLR179C 606 nt12.42□□□□□ -0.42
VPS53P47061 YNL195CYNL195C 786 nt12.39□□□□□ -0.43
VPS53P47061 SBA1YKL117W 651 nt12.37□□□□□ -0.43
VPS53P47061 TAD3YLR316C 969 nt12.35□□□□□ -0.43
VPS53P47061 RNQ1YCL028W 1218 nt12.34□□□□□ -0.43
VPS53P47061 PIB2YGL023C 1908 nt12.34□□□□□ -0.43
VPS53P47061 PRE6YOL038W 765 nt12.32□□□□□ -0.44
VPS53P47061 RRT12YCR045C 1476 nt12.31□□□□□ -0.44
VPS53P47061 YIH1YCR059C 777 nt12.3□□□□□ -0.44
VPS53P47061 YSC84YHR016C 1407 nt12.28□□□□□ -0.44
VPS53P47061 AHT1YHR093W 549 nt12.27□□□□□ -0.45
VPS53P47061 WSC2YNL283C 1512 nt12.26□□□□□ -0.45
VPS53P47061 YHL050CYHL050C 2094 nt12.25□□□□□ -0.45
VPS53P47061 AQY1YPR192W 918 nt12.21□□□□□ -0.45
VPS53P47061 PEX25YPL112C 1185 nt12.2□□□□□ -0.46
VPS53P47061 NAT4YMR069W 858 nt12.17□□□□□ -0.46
VPS53P47061 BIO4YNR057C 714 nt12.17□□□□□ -0.46
Retrieved 100 of 7,029 protein–RNA pairs in 12.5 ms