Protein–RNA interactions for Protein: P46669

RPA43, DNA-directed RNA polymerase I subunit RPA43, yeastyeast

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPA43P46669 YBL100CYBL100C 315 nt9.97□□□□□ -0.81
RPA43P46669 PCH2YBR186W 1695 nt9.95□□□□□ -0.82
RPA43P46669 SEC11YIR022W 504 nt9.91□□□□□ -0.82
RPA43P46669 GUT2YIL155C 1950 nt9.91□□□□□ -0.82
RPA43P46669 TRM9YML014W 840 nt9.86□□□□□ -0.83
RPA43P46669 FUN26YAL022C 1554 nt9.84□□□□□ -0.83
RPA43P46669 tM(CAU)CtM(CAU)C 72 nt9.84□□□□□ -0.83
RPA43P46669 IMT4tM(CAU)E 72 nt9.84□□□□□ -0.83
RPA43P46669 IMT3tM(CAU)J3 72 nt9.84□□□□□ -0.83
RPA43P46669 IMT1tM(CAU)O1 72 nt9.84□□□□□ -0.83
RPA43P46669 IMT2tM(CAU)P 72 nt9.84□□□□□ -0.83
RPA43P46669 CAC2YML102W 1407 nt9.82□□□□□ -0.84
RPA43P46669 SCC4YER147C 1875 nt9.82□□□□□ -0.84
RPA43P46669 UME6YDR207C 2511 nt9.81□□□□□ -0.84
RPA43P46669 YLR281CYLR281C 468 nt9.79□□□□□ -0.84
RPA43P46669 RPP2AYOL039W 321 nt9.79□□□□□ -0.84
RPA43P46669 PTP1YDL230W 1008 nt9.78□□□□□ -0.84
RPA43P46669 CCT6YDR188W 1641 nt9.76□□□□□ -0.85
RPA43P46669 PUS2YGL063W 1113 nt9.73□□□□□ -0.85
RPA43P46669 WHI5YOR083W 888 nt9.73□□□□□ -0.85
RPA43P46669 ALF1YNL148C 765 nt9.72□□□□□ -0.85
RPA43P46669 PIB2YGL023C 1908 nt9.71□□□□□ -0.86
RPA43P46669 SUF2tP(AGG)C 72 nt9.7□□□□□ -0.86
RPA43P46669 SUF10tP(AGG)N 72 nt9.7□□□□□ -0.86
RPA43P46669 IRC15YPL017C 1500 nt9.69□□□□□ -0.86
RPA43P46669 YSC84YHR016C 1407 nt9.66□□□□□ -0.86
RPA43P46669 GIS3YLR094C 1509 nt9.66□□□□□ -0.86
RPA43P46669 RTF1YGL244W 1677 nt9.64□□□□□ -0.87
RPA43P46669 YLR154C-GYLR154C-G 150 nt9.62□□□□□ -0.87
RPA43P46669 IMP2'YIL154C 1041 nt9.58□□□□□ -0.88
RPA43P46669 YHL050CYHL050C 2094 nt9.58□□□□□ -0.88
RPA43P46669 DSK2YMR276W 1122 nt9.56□□□□□ -0.88
RPA43P46669 SIS1YNL007C 1059 nt9.55□□□□□ -0.88
RPA43P46669 BOP3YNL042W 1191 nt9.54□□□□□ -0.88
RPA43P46669 MOT3YMR070W 1473 nt9.53□□□□□ -0.88
RPA43P46669 GFD2YCL036W 1701 nt9.49□□□□□ -0.89
RPA43P46669 FMP45YDL222C 930 nt9.49□□□□□ -0.89
RPA43P46669 YLR236CYLR236C 324 nt9.49□□□□□ -0.89
RPA43P46669 YJL152WYJL152W 360 nt9.48□□□□□ -0.89
RPA43P46669 PTK1YKL198C 1989 nt9.48□□□□□ -0.89
RPA43P46669 RTS2YOR077W 699 nt9.47□□□□□ -0.89
RPA43P46669 ART5YGR068C 1761 nt9.46□□□□□ -0.9
RPA43P46669 YPR011CYPR011C 981 nt9.46□□□□□ -0.9
RPA43P46669 RRT12YCR045C 1476 nt9.45□□□□□ -0.9
RPA43P46669 BOR1YNL275W 1731 nt9.45□□□□□ -0.9
RPA43P46669 YNL195CYNL195C 786 nt9.44□□□□□ -0.9
RPA43P46669 YCH1YGR203W 447 nt9.41□□□□□ -0.9
RPA43P46669 IDH1YNL037C 1083 nt9.41□□□□□ -0.9
RPA43P46669 TIR4YOR009W 1464 nt9.4□□□□□ -0.9
RPA43P46669 CUE1YMR264W 612 nt9.39□□□□□ -0.91
RPA43P46669 PET9YBL030C 957 nt9.37□□□□□ -0.91
RPA43P46669 Q0182Q0182 405 nt9.36□□□□□ -0.91
RPA43P46669 ERV46YAL042W 1248 nt9.34□□□□□ -0.91
RPA43P46669 YIL100WYIL100W 354 nt9.31□□□□□ -0.92
RPA43P46669 LPX1YOR084W 1164 nt9.31□□□□□ -0.92
RPA43P46669 YDR433WYDR433W 441 nt9.29□□□□□ -0.92
RPA43P46669 GBP2YCL011C 1284 nt9.29□□□□□ -0.92
RPA43P46669 YFL054CYFL054C 1941 nt9.29□□□□□ -0.92
RPA43P46669 MCH5YOR306C 1566 nt9.29□□□□□ -0.92
RPA43P46669 NCP1YHR042W 2076 nt9.28□□□□□ -0.92
RPA43P46669 YMR057CYMR057C 372 nt9.26□□□□□ -0.93
RPA43P46669 YCL048W-AYCL048W-A 240 nt9.26□□□□□ -0.93
RPA43P46669 SPT8YLR055C 1809 nt9.26□□□□□ -0.93
RPA43P46669 MRPL8YJL063C 717 nt9.25□□□□□ -0.93
RPA43P46669 YKR040CYKR040C 504 nt9.24□□□□□ -0.93
RPA43P46669 TCD2YKL027W 1344 nt9.17□□□□□ -0.94
RPA43P46669 SPP1YPL138C 1062 nt9.17□□□□□ -0.94
RPA43P46669 MXR2YCL033C 507 nt9.16□□□□□ -0.94
RPA43P46669 ALG12YNR030W 1656 nt9.13□□□□□ -0.95
RPA43P46669 ADO1YJR105W 1023 nt9.13□□□□□ -0.95
RPA43P46669 YEL076C-AYEL076C-A 651 nt9.11□□□□□ -0.95
RPA43P46669 YEL076CYEL076C 651 nt9.11□□□□□ -0.95
RPA43P46669 YLR464WYLR464W 651 nt9.11□□□□□ -0.95
RPA43P46669 HSP60YLR259C 1719 nt9.11□□□□□ -0.95
RPA43P46669 RTG1YOL067C 534 nt9.09□□□□□ -0.95
RPA43P46669 RRD1YIL153W 1182 nt9.07□□□□□ -0.96
RPA43P46669 DED1YOR204W 1815 nt9.06□□□□□ -0.96
RPA43P46669 SWE1YJL187C 2460 nt9.04□□□□□ -0.96
RPA43P46669 LCB1YMR296C 1677 nt9.04□□□□□ -0.96
RPA43P46669 FRD1YEL047C 1413 nt9.02□□□□□ -0.97
RPA43P46669 YCL042WYCL042W 360 nt9□□□□□ -0.97
RPA43P46669 SOR2YDL246C 1074 nt8.99□□□□□ -0.97
RPA43P46669 SOR1YJR159W 1074 nt8.99□□□□□ -0.97
RPA43P46669 FMP52YER004W 696 nt8.98□□□□□ -0.97
RPA43P46669 GLK1YCL040W 1503 nt8.97□□□□□ -0.97
RPA43P46669 HUA1YGR268C 597 nt8.96□□□□□ -0.98
RPA43P46669 FMT1YBL013W 1206 nt8.96□□□□□ -0.98
RPA43P46669 RPM1RPM1 483 nt8.93□□□□□ -0.98
RPA43P46669 YLR235CYLR235C 399 nt8.92□□□□□ -0.98
RPA43P46669 PTH1YHR189W 573 nt8.89□□□□□ -0.99
RPA43P46669 YKL030WYKL030W 606 nt8.89□□□□□ -0.99
RPA43P46669 CWP1YKL096W 720 nt8.87□□□□□ -0.99
RPA43P46669 LYS4YDR234W 2082 nt8.86□□□□□ -0.99
RPA43P46669 UBX6YJL048C 1191 nt8.85□□□□□ -0.99
RPA43P46669 ADH2YMR303C 1047 nt8.84□□□□□ -0.99
RPA43P46669 FUR4YBR021W 1902 nt8.82□□□□□ -1
RPA43P46669 SIM1YIL123W 1431 nt8.81□□□□□ -1
RPA43P46669 YDR094WYDR094W 336 nt8.8□□□□□ -1
RPA43P46669 NAR1YNL240C 1476 nt8.8□□□□□ -1
RPA43P46669 PCM1YEL058W 1674 nt8.8□□□□□ -1
Retrieved 100 of 7,029 protein–RNA pairs in 16 ms