Protein–RNA interactions for Protein: P43554

SWP82, SWI/SNF global transcription activator complex subunit SWP82, yeastyeast

Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SWP82P43554 SIS1YNL007C 1059 nt11.56□□□□□ -0.56
SWP82P43554 SUF2tP(AGG)C 72 nt11.55□□□□□ -0.56
SWP82P43554 SUF10tP(AGG)N 72 nt11.55□□□□□ -0.56
SWP82P43554 MOT3YMR070W 1473 nt11.51□□□□□ -0.57
SWP82P43554 YSC84YHR016C 1407 nt11.51□□□□□ -0.57
SWP82P43554 GIS3YLR094C 1509 nt11.5□□□□□ -0.57
SWP82P43554 YFL021C-AYFL021C-A 855 nt11.49□□□□□ -0.57
SWP82P43554 RTF1YGL244W 1677 nt11.49□□□□□ -0.57
SWP82P43554 YGR021WYGR021W 873 nt11.47□□□□□ -0.57
SWP82P43554 YHL050CYHL050C 2094 nt11.43□□□□□ -0.58
SWP82P43554 SHU1YHL006C 453 nt11.41□□□□□ -0.58
SWP82P43554 HOM6YJR139C 1080 nt11.41□□□□□ -0.58
SWP82P43554 ART5YGR068C 1761 nt11.4□□□□□ -0.58
SWP82P43554 GFD2YCL036W 1701 nt11.4□□□□□ -0.58
SWP82P43554 YAL037C-BYAL037C-B 975 nt11.35□□□□□ -0.59
SWP82P43554 BOP3YNL042W 1191 nt11.35□□□□□ -0.59
SWP82P43554 YJL225CYJL225C 5277 nt11.35□□□□□ -0.59
SWP82P43554 FPS1YLL043W 2010 nt11.33□□□□□ -0.6
SWP82P43554 PET9YBL030C 957 nt11.32□□□□□ -0.6
SWP82P43554 PTK1YKL198C 1989 nt11.31□□□□□ -0.6
SWP82P43554 RTS2YOR077W 699 nt11.28□□□□□ -0.6
SWP82P43554 YCH1YGR203W 447 nt11.27□□□□□ -0.61
SWP82P43554 RRT12YCR045C 1476 nt11.26□□□□□ -0.61
SWP82P43554 MNP1YGL068W 585 nt11.26□□□□□ -0.61
SWP82P43554 RKM5YLR137W 1104 nt11.24□□□□□ -0.61
SWP82P43554 BOR1YNL275W 1731 nt11.23□□□□□ -0.61
SWP82P43554 CUE1YMR264W 612 nt11.22□□□□□ -0.61
SWP82P43554 TIR4YOR009W 1464 nt11.22□□□□□ -0.61
SWP82P43554 UME6YDR207C 2511 nt11.19□□□□□ -0.62
SWP82P43554 YNL195CYNL195C 786 nt11.18□□□□□ -0.62
SWP82P43554 YMR057CYMR057C 372 nt11.13□□□□□ -0.63
SWP82P43554 YKL097CYKL097C 411 nt11.1□□□□□ -0.63
SWP82P43554 NCP1YHR042W 2076 nt11.08□□□□□ -0.64
SWP82P43554 NPL3YDR432W 1245 nt11.07□□□□□ -0.64
SWP82P43554 YIL100WYIL100W 354 nt11.07□□□□□ -0.64
SWP82P43554 YFL054CYFL054C 1941 nt11.05□□□□□ -0.64
SWP82P43554 SPT8YLR055C 1809 nt11.02□□□□□ -0.64
SWP82P43554 YLR236CYLR236C 324 nt11.01□□□□□ -0.65
SWP82P43554 YLR154C-GYLR154C-G 150 nt10.99□□□□□ -0.65
SWP82P43554 YJL152WYJL152W 360 nt10.96□□□□□ -0.65
SWP82P43554 YOL037CYOL037C 354 nt10.94□□□□□ -0.66
SWP82P43554 YCL048W-AYCL048W-A 240 nt10.91□□□□□ -0.66
SWP82P43554 MCH5YOR306C 1566 nt10.87□□□□□ -0.67
SWP82P43554 HSP60YLR259C 1719 nt10.85□□□□□ -0.67
SWP82P43554 RDN37-1RDN37-1 5354 nt10.81□□□□□ -0.68
SWP82P43554 RDN37-2RDN37-2 5354 nt10.81□□□□□ -0.68
SWP82P43554 ALG12YNR030W 1656 nt10.81□□□□□ -0.68
SWP82P43554 SWE1YJL187C 2460 nt10.78□□□□□ -0.68
SWP82P43554 LCB1YMR296C 1677 nt10.77□□□□□ -0.69
SWP82P43554 WHI5YOR083W 888 nt10.74□□□□□ -0.69
SWP82P43554 YOR139CYOR139C 393 nt10.74□□□□□ -0.69
SWP82P43554 YLR281CYLR281C 468 nt10.72□□□□□ -0.69
SWP82P43554 RRD1YIL153W 1182 nt10.69□□□□□ -0.7
SWP82P43554 GLK1YCL040W 1503 nt10.68□□□□□ -0.7
SWP82P43554 IDH1YNL037C 1083 nt10.66□□□□□ -0.7
SWP82P43554 FMP52YER004W 696 nt10.65□□□□□ -0.7
SWP82P43554 GBP2YCL011C 1284 nt10.64□□□□□ -0.71
SWP82P43554 DED1YOR204W 1815 nt10.61□□□□□ -0.71
SWP82P43554 TCD2YKL027W 1344 nt10.58□□□□□ -0.71
SWP82P43554 PCM1YEL058W 1674 nt10.58□□□□□ -0.72
SWP82P43554 LYS4YDR234W 2082 nt10.56□□□□□ -0.72
SWP82P43554 SIM1YIL123W 1431 nt10.55□□□□□ -0.72
SWP82P43554 IMP2'YIL154C 1041 nt10.54□□□□□ -0.72
SWP82P43554 FMT1YBL013W 1206 nt10.54□□□□□ -0.72
SWP82P43554 FUR4YBR021W 1902 nt10.51□□□□□ -0.73
SWP82P43554 DSK2YMR276W 1122 nt10.51□□□□□ -0.73
SWP82P43554 NAR1YNL240C 1476 nt10.49□□□□□ -0.73
SWP82P43554 BIO4YNR057C 714 nt10.48□□□□□ -0.73
SWP82P43554 ADH2YMR303C 1047 nt10.47□□□□□ -0.73
SWP82P43554 PUS2YGL063W 1113 nt10.46□□□□□ -0.73
SWP82P43554 CWP1YKL096W 720 nt10.46□□□□□ -0.73
SWP82P43554 SNF6YHL025W 999 nt10.45□□□□□ -0.74
SWP82P43554 AAC1YMR056C 930 nt10.45□□□□□ -0.74
SWP82P43554 PRP4YPR178W 1398 nt10.42□□□□□ -0.74
SWP82P43554 SOR2YDL246C 1074 nt10.42□□□□□ -0.74
SWP82P43554 YDR433WYDR433W 441 nt10.42□□□□□ -0.74
SWP82P43554 SOR1YJR159W 1074 nt10.42□□□□□ -0.74
SWP82P43554 FMP45YDL222C 930 nt10.4□□□□□ -0.74
SWP82P43554 YEL076C-AYEL076C-A 651 nt10.39□□□□□ -0.75
SWP82P43554 YEL076CYEL076C 651 nt10.39□□□□□ -0.75
SWP82P43554 YLR464WYLR464W 651 nt10.39□□□□□ -0.75
SWP82P43554 MXR2YCL033C 507 nt10.39□□□□□ -0.75
SWP82P43554 YPR011CYPR011C 981 nt10.38□□□□□ -0.75
SWP82P43554 DPS1YLL018C 1674 nt10.38□□□□□ -0.75
SWP82P43554 tM(CAU)CtM(CAU)C 72 nt10.37□□□□□ -0.75
SWP82P43554 IMT4tM(CAU)E 72 nt10.37□□□□□ -0.75
SWP82P43554 IMT3tM(CAU)J3 72 nt10.37□□□□□ -0.75
SWP82P43554 IMT1tM(CAU)O1 72 nt10.37□□□□□ -0.75
SWP82P43554 IMT2tM(CAU)P 72 nt10.37□□□□□ -0.75
SWP82P43554 ERF2YLR246W 1080 nt10.36□□□□□ -0.75
SWP82P43554 YCL042WYCL042W 360 nt10.35□□□□□ -0.75
SWP82P43554 YIH1YCR059C 777 nt10.34□□□□□ -0.75
SWP82P43554 ERV46YAL042W 1248 nt10.33□□□□□ -0.76
SWP82P43554 CRR1YLR213C 1269 nt10.33□□□□□ -0.76
SWP82P43554 YHR056W-AYHR056W-A 435 nt10.3□□□□□ -0.76
SWP82P43554 BIO5YNR056C 1686 nt10.3□□□□□ -0.76
SWP82P43554 YKR040CYKR040C 504 nt10.29□□□□□ -0.76
SWP82P43554 BMT6YLR063W 1098 nt10.29□□□□□ -0.76
SWP82P43554 PBP1YGR178C 2169 nt10.28□□□□□ -0.76
SWP82P43554 FRD1YEL047C 1413 nt10.28□□□□□ -0.76
Retrieved 100 of 7,029 protein–RNA pairs in 9.1 ms