Protein–RNA interactions for Protein: P38878

LNP1, Endoplasmic reticulum junction formation protein lunapark, yeastyeast

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
LNP1P38878 YDL221WYDL221W 552 nt10.76□□□□□ -0.69
LNP1P38878 SDH1YKL148C 1923 nt10.74□□□□□ -0.69
LNP1P38878 MNP1YGL068W 585 nt10.7□□□□□ -0.7
LNP1P38878 CCT6YDR188W 1641 nt10.69□□□□□ -0.7
LNP1P38878 YOR139CYOR139C 393 nt10.67□□□□□ -0.7
LNP1P38878 PCH2YBR186W 1695 nt10.66□□□□□ -0.7
LNP1P38878 SUF2tP(AGG)C 72 nt10.66□□□□□ -0.7
LNP1P38878 SUF10tP(AGG)N 72 nt10.66□□□□□ -0.7
LNP1P38878 CAC2YML102W 1407 nt10.65□□□□□ -0.7
LNP1P38878 SEC11YIR022W 504 nt10.64□□□□□ -0.71
LNP1P38878 RKM5YLR137W 1104 nt10.63□□□□□ -0.71
LNP1P38878 RPP2AYOL039W 321 nt10.63□□□□□ -0.71
LNP1P38878 GUT2YIL155C 1950 nt10.61□□□□□ -0.71
LNP1P38878 PTP1YDL230W 1008 nt10.61□□□□□ -0.71
LNP1P38878 SCC4YER147C 1875 nt10.59□□□□□ -0.71
LNP1P38878 NPL3YDR432W 1245 nt10.57□□□□□ -0.72
LNP1P38878 SIS1YNL007C 1059 nt10.53□□□□□ -0.72
LNP1P38878 YOL037CYOL037C 354 nt10.5□□□□□ -0.73
LNP1P38878 IRC15YPL017C 1500 nt10.49□□□□□ -0.73
LNP1P38878 GIS3YLR094C 1509 nt10.45□□□□□ -0.74
LNP1P38878 YSC84YHR016C 1407 nt10.42□□□□□ -0.74
LNP1P38878 ART5YGR068C 1761 nt10.38□□□□□ -0.75
LNP1P38878 PIB2YGL023C 1908 nt10.37□□□□□ -0.75
LNP1P38878 RTF1YGL244W 1677 nt10.35□□□□□ -0.75
LNP1P38878 PET9YBL030C 957 nt10.34□□□□□ -0.75
LNP1P38878 GFD2YCL036W 1701 nt10.33□□□□□ -0.76
LNP1P38878 YCH1YGR203W 447 nt10.33□□□□□ -0.76
LNP1P38878 YJL152WYJL152W 360 nt10.32□□□□□ -0.76
LNP1P38878 YLR154C-GYLR154C-G 150 nt10.32□□□□□ -0.76
LNP1P38878 YHL050CYHL050C 2094 nt10.31□□□□□ -0.76
LNP1P38878 TIR4YOR009W 1464 nt10.3□□□□□ -0.76
LNP1P38878 RTS2YOR077W 699 nt10.29□□□□□ -0.76
LNP1P38878 MCH5YOR306C 1566 nt10.29□□□□□ -0.76
LNP1P38878 BOP3YNL042W 1191 nt10.26□□□□□ -0.77
LNP1P38878 BOR1YNL275W 1731 nt10.25□□□□□ -0.77
LNP1P38878 WHI5YOR083W 888 nt10.25□□□□□ -0.77
LNP1P38878 YLR281CYLR281C 468 nt10.24□□□□□ -0.77
LNP1P38878 YMR057CYMR057C 372 nt10.24□□□□□ -0.77
LNP1P38878 RRT12YCR045C 1476 nt10.23□□□□□ -0.77
LNP1P38878 YNL195CYNL195C 786 nt10.23□□□□□ -0.77
LNP1P38878 tM(CAU)CtM(CAU)C 72 nt10.22□□□□□ -0.77
LNP1P38878 IMT4tM(CAU)E 72 nt10.22□□□□□ -0.77
LNP1P38878 IMT3tM(CAU)J3 72 nt10.22□□□□□ -0.77
LNP1P38878 IMT1tM(CAU)O1 72 nt10.22□□□□□ -0.77
LNP1P38878 IMT2tM(CAU)P 72 nt10.22□□□□□ -0.77
LNP1P38878 CUE1YMR264W 612 nt10.19□□□□□ -0.78
LNP1P38878 PTK1YKL198C 1989 nt10.17□□□□□ -0.78
LNP1P38878 YCL048W-AYCL048W-A 240 nt10.16□□□□□ -0.78
LNP1P38878 PUS2YGL063W 1113 nt10.13□□□□□ -0.79
LNP1P38878 YIL100WYIL100W 354 nt10.12□□□□□ -0.79
LNP1P38878 YLR236CYLR236C 324 nt10.08□□□□□ -0.8
LNP1P38878 IDH1YNL037C 1083 nt10.08□□□□□ -0.8
LNP1P38878 IMP2'YIL154C 1041 nt10.07□□□□□ -0.8
LNP1P38878 DSK2YMR276W 1122 nt10.03□□□□□ -0.8
LNP1P38878 YFL054CYFL054C 1941 nt10□□□□□ -0.81
LNP1P38878 GBP2YCL011C 1284 nt10□□□□□ -0.81
LNP1P38878 NCP1YHR042W 2076 nt9.96□□□□□ -0.81
LNP1P38878 SPT8YLR055C 1809 nt9.92□□□□□ -0.82
LNP1P38878 TCD2YKL027W 1344 nt9.91□□□□□ -0.82
LNP1P38878 YDR433WYDR433W 441 nt9.91□□□□□ -0.82
LNP1P38878 ALG12YNR030W 1656 nt9.9□□□□□ -0.82
LNP1P38878 YPR011CYPR011C 981 nt9.88□□□□□ -0.83
LNP1P38878 FMP45YDL222C 930 nt9.87□□□□□ -0.83
LNP1P38878 RRD1YIL153W 1182 nt9.85□□□□□ -0.83
LNP1P38878 RPM1RPM1 483 nt9.81□□□□□ -0.84
LNP1P38878 DED1YOR204W 1815 nt9.8□□□□□ -0.84
LNP1P38878 FMP52YER004W 696 nt9.8□□□□□ -0.84
LNP1P38878 ERV46YAL042W 1248 nt9.8□□□□□ -0.84
LNP1P38878 MXR2YCL033C 507 nt9.8□□□□□ -0.84
LNP1P38878 LPX1YOR084W 1164 nt9.79□□□□□ -0.84
LNP1P38878 YKR040CYKR040C 504 nt9.78□□□□□ -0.84
LNP1P38878 LCB1YMR296C 1677 nt9.77□□□□□ -0.85
LNP1P38878 YCL042WYCL042W 360 nt9.74□□□□□ -0.85
LNP1P38878 HSP60YLR259C 1719 nt9.73□□□□□ -0.85
LNP1P38878 SWE1YJL187C 2460 nt9.71□□□□□ -0.85
LNP1P38878 FMT1YBL013W 1206 nt9.71□□□□□ -0.86
LNP1P38878 CWP1YKL096W 720 nt9.7□□□□□ -0.86
LNP1P38878 PCM1YEL058W 1674 nt9.7□□□□□ -0.86
LNP1P38878 SNF6YHL025W 999 nt9.66□□□□□ -0.86
LNP1P38878 ADH2YMR303C 1047 nt9.66□□□□□ -0.86
LNP1P38878 SOR2YDL246C 1074 nt9.65□□□□□ -0.86
LNP1P38878 SOR1YJR159W 1074 nt9.65□□□□□ -0.86
LNP1P38878 MRPL8YJL063C 717 nt9.64□□□□□ -0.87
LNP1P38878 FRD1YEL047C 1413 nt9.63□□□□□ -0.87
LNP1P38878 GLK1YCL040W 1503 nt9.62□□□□□ -0.87
LNP1P38878 SIM1YIL123W 1431 nt9.62□□□□□ -0.87
LNP1P38878 HSL7YBR133C 2484 nt9.62□□□□□ -0.87
LNP1P38878 NAR1YNL240C 1476 nt9.59□□□□□ -0.87
LNP1P38878 LYS4YDR234W 2082 nt9.55□□□□□ -0.88
LNP1P38878 ADO1YJR105W 1023 nt9.53□□□□□ -0.88
LNP1P38878 BIO4YNR057C 714 nt9.53□□□□□ -0.88
LNP1P38878 SPP1YPL138C 1062 nt9.53□□□□□ -0.88
LNP1P38878 YIH1YCR059C 777 nt9.5□□□□□ -0.89
LNP1P38878 RNQ1YCL028W 1218 nt9.5□□□□□ -0.89
LNP1P38878 YEL076C-AYEL076C-A 651 nt9.49□□□□□ -0.89
LNP1P38878 YEL076CYEL076C 651 nt9.49□□□□□ -0.89
LNP1P38878 YLR464WYLR464W 651 nt9.49□□□□□ -0.89
LNP1P38878 FUR4YBR021W 1902 nt9.48□□□□□ -0.89
LNP1P38878 PTH1YHR189W 573 nt9.47□□□□□ -0.89
LNP1P38878 YLL053CYLL053C 459 nt9.46□□□□□ -0.9
Retrieved 100 of 7,029 protein–RNA pairs in 11.1 ms