Protein–RNA interactions for Protein: P38842

YHR140W, UPF0641 membrane protein YHR140W, yeastyeast

Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
YHR140WP38842 IRC15YPL017C 1500 nt9.44□□□□□ -0.9
YHR140WP38842 PCH2YBR186W 1695 nt9.42□□□□□ -0.9
YHR140WP38842 YFL021C-AYFL021C-A 855 nt9.41□□□□□ -0.9
YHR140WP38842 YGR021WYGR021W 873 nt9.39□□□□□ -0.91
YHR140WP38842 GIS3YLR094C 1509 nt9.39□□□□□ -0.91
YHR140WP38842 GUT2YIL155C 1950 nt9.37□□□□□ -0.91
YHR140WP38842 GFD2YCL036W 1701 nt9.36□□□□□ -0.91
YHR140WP38842 ART5YGR068C 1761 nt9.35□□□□□ -0.91
YHR140WP38842 PET9YBL030C 957 nt9.33□□□□□ -0.92
YHR140WP38842 YCH1YGR203W 447 nt9.3□□□□□ -0.92
YHR140WP38842 HOM6YJR139C 1080 nt9.29□□□□□ -0.92
YHR140WP38842 RDN37-1RDN37-1 5354 nt9.29□□□□□ -0.92
YHR140WP38842 RDN37-2RDN37-2 5354 nt9.29□□□□□ -0.92
YHR140WP38842 YSC84YHR016C 1407 nt9.27□□□□□ -0.93
YHR140WP38842 RTS2YOR077W 699 nt9.26□□□□□ -0.93
YHR140WP38842 SHU1YHL006C 453 nt9.24□□□□□ -0.93
YHR140WP38842 CUE1YMR264W 612 nt9.24□□□□□ -0.93
YHR140WP38842 YAL037C-BYAL037C-B 975 nt9.2□□□□□ -0.94
YHR140WP38842 YHL050CYHL050C 2094 nt9.2□□□□□ -0.94
YHR140WP38842 YNL195CYNL195C 786 nt9.19□□□□□ -0.94
YHR140WP38842 PIB2YGL023C 1908 nt9.17□□□□□ -0.94
YHR140WP38842 TIR4YOR009W 1464 nt9.17□□□□□ -0.94
YHR140WP38842 RKM5YLR137W 1104 nt9.16□□□□□ -0.94
YHR140WP38842 RTF1YGL244W 1677 nt9.16□□□□□ -0.94
YHR140WP38842 YIL100WYIL100W 354 nt9.15□□□□□ -0.94
YHR140WP38842 RRT12YCR045C 1476 nt9.15□□□□□ -0.95
YHR140WP38842 MNP1YGL068W 585 nt9.13□□□□□ -0.95
YHR140WP38842 YMR057CYMR057C 372 nt9.13□□□□□ -0.95
YHR140WP38842 BOP3YNL042W 1191 nt9.12□□□□□ -0.95
YHR140WP38842 YLR236CYLR236C 324 nt9.1□□□□□ -0.95
YHR140WP38842 NPL3YDR432W 1245 nt9.03□□□□□ -0.96
YHR140WP38842 PTK1YKL198C 1989 nt9□□□□□ -0.97
YHR140WP38842 YJL152WYJL152W 360 nt8.99□□□□□ -0.97
YHR140WP38842 YLR154C-GYLR154C-G 150 nt8.99□□□□□ -0.97
YHR140WP38842 YKL097CYKL097C 411 nt8.98□□□□□ -0.97
YHR140WP38842 YCL048W-AYCL048W-A 240 nt8.98□□□□□ -0.97
YHR140WP38842 NCP1YHR042W 2076 nt8.93□□□□□ -0.98
YHR140WP38842 UME6YDR207C 2511 nt8.92□□□□□ -0.98
YHR140WP38842 YOL037CYOL037C 354 nt8.91□□□□□ -0.98
YHR140WP38842 YFL054CYFL054C 1941 nt8.84□□□□□ -1
YHR140WP38842 Q0182Q0182 405 nt8.81□□□□□ -1
YHR140WP38842 LCB1YMR296C 1677 nt8.79□□□□□ -1
YHR140WP38842 SPT8YLR055C 1809 nt8.77□□□□□ -1
YHR140WP38842 FMP52YER004W 696 nt8.76□□□□□ -1.01
YHR140WP38842 WHI5YOR083W 888 nt8.74□□□□□ -1.01
YHR140WP38842 RRD1YIL153W 1182 nt8.73□□□□□ -1.01
YHR140WP38842 IDH1YNL037C 1083 nt8.73□□□□□ -1.01
YHR140WP38842 YLR281CYLR281C 468 nt8.71□□□□□ -1.02
YHR140WP38842 GBP2YCL011C 1284 nt8.7□□□□□ -1.02
YHR140WP38842 SIM1YIL123W 1431 nt8.7□□□□□ -1.02
YHR140WP38842 BOR1YNL275W 1731 nt8.69□□□□□ -1.02
YHR140WP38842 TCD2YKL027W 1344 nt8.68□□□□□ -1.02
YHR140WP38842 PCM1YEL058W 1674 nt8.68□□□□□ -1.02
YHR140WP38842 YOR139CYOR139C 393 nt8.65□□□□□ -1.02
YHR140WP38842 DED1YOR204W 1815 nt8.64□□□□□ -1.03
YHR140WP38842 IMP2'YIL154C 1041 nt8.63□□□□□ -1.03
YHR140WP38842 LYS4YDR234W 2082 nt8.62□□□□□ -1.03
YHR140WP38842 SWE1YJL187C 2460 nt8.61□□□□□ -1.03
YHR140WP38842 SNF6YHL025W 999 nt8.6□□□□□ -1.03
YHR140WP38842 FMT1YBL013W 1206 nt8.59□□□□□ -1.03
YHR140WP38842 BIO4YNR057C 714 nt8.58□□□□□ -1.04
YHR140WP38842 CWP1YKL096W 720 nt8.57□□□□□ -1.04
YHR140WP38842 RPM1RPM1 483 nt8.56□□□□□ -1.04
YHR140WP38842 ADH2YMR303C 1047 nt8.56□□□□□ -1.04
YHR140WP38842 ERF2YLR246W 1080 nt8.54□□□□□ -1.04
YHR140WP38842 MCH5YOR306C 1566 nt8.52□□□□□ -1.04
YHR140WP38842 DSK2YMR276W 1122 nt8.52□□□□□ -1.05
YHR140WP38842 SOR2YDL246C 1074 nt8.51□□□□□ -1.05
YHR140WP38842 SOR1YJR159W 1074 nt8.51□□□□□ -1.05
YHR140WP38842 YDR433WYDR433W 441 nt8.5□□□□□ -1.05
YHR140WP38842 HSP60YLR259C 1719 nt8.5□□□□□ -1.05
YHR140WP38842 YCL042WYCL042W 360 nt8.5□□□□□ -1.05
YHR140WP38842 PUS2YGL063W 1113 nt8.49□□□□□ -1.05
YHR140WP38842 CRR1YLR213C 1269 nt8.49□□□□□ -1.05
YHR140WP38842 YIH1YCR059C 777 nt8.48□□□□□ -1.05
YHR140WP38842 FMP45YDL222C 930 nt8.45□□□□□ -1.06
YHR140WP38842 GLK1YCL040W 1503 nt8.44□□□□□ -1.06
YHR140WP38842 YHR056W-AYHR056W-A 435 nt8.44□□□□□ -1.06
YHR140WP38842 RNQ1YCL028W 1218 nt8.44□□□□□ -1.06
YHR140WP38842 MXR2YCL033C 507 nt8.44□□□□□ -1.06
YHR140WP38842 YLL053CYLL053C 459 nt8.43□□□□□ -1.06
YHR140WP38842 HEM12YDR047W 1089 nt8.42□□□□□ -1.06
YHR140WP38842 RAX1YOR301W 1308 nt8.4□□□□□ -1.06
YHR140WP38842 YFL067WYFL067W 528 nt8.4□□□□□ -1.06
YHR140WP38842 ERV46YAL042W 1248 nt8.4□□□□□ -1.06
YHR140WP38842 YKR040CYKR040C 504 nt8.4□□□□□ -1.06
YHR140WP38842 FUR4YBR021W 1902 nt8.38□□□□□ -1.07
YHR140WP38842 ALG12YNR030W 1656 nt8.37□□□□□ -1.07
YHR140WP38842 ATF2YGR177C 1608 nt8.37□□□□□ -1.07
YHR140WP38842 tM(CAU)CtM(CAU)C 72 nt8.37□□□□□ -1.07
YHR140WP38842 IMT4tM(CAU)E 72 nt8.37□□□□□ -1.07
YHR140WP38842 IMT3tM(CAU)J3 72 nt8.37□□□□□ -1.07
YHR140WP38842 IMT1tM(CAU)O1 72 nt8.37□□□□□ -1.07
YHR140WP38842 IMT2tM(CAU)P 72 nt8.37□□□□□ -1.07
YHR140WP38842 YPR011CYPR011C 981 nt8.36□□□□□ -1.07
YHR140WP38842 MIC10YCL057C-A 294 nt8.36□□□□□ -1.07
YHR140WP38842 FRD1YEL047C 1413 nt8.36□□□□□ -1.07
YHR140WP38842 FTR1YER145C 1215 nt8.35□□□□□ -1.07
YHR140WP38842 SNG1YGR197C 1644 nt8.35□□□□□ -1.07
YHR140WP38842 CCA1YER168C 1641 nt8.33□□□□□ -1.08
Retrieved 100 of 7,029 protein–RNA pairs in 9.8 ms