Protein–RNA interactions for Protein: P38339

RGD1, RHO GTPase-activating protein RGD1, yeastyeast

Predictions only

Length 666 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RGD1P38339 TRM9YML014W 840 nt13.28□□□□□ -0.28
RGD1P38339 CAC2YML102W 1407 nt13.28□□□□□ -0.28
RGD1P38339 PAC11YDR488C 1602 nt13.28□□□□□ -0.28
RGD1P38339 SDH1YKL148C 1923 nt13.25□□□□□ -0.29
RGD1P38339 PTP1YDL230W 1008 nt13.25□□□□□ -0.29
RGD1P38339 MOT3YMR070W 1473 nt13.24□□□□□ -0.29
RGD1P38339 YLR281CYLR281C 468 nt13.22□□□□□ -0.29
RGD1P38339 PUS2YGL063W 1113 nt13.19□□□□□ -0.3
RGD1P38339 FUN26YAL022C 1554 nt13.17□□□□□ -0.3
RGD1P38339 WHI5YOR083W 888 nt13.14□□□□□ -0.31
RGD1P38339 RPP2AYOL039W 321 nt13.13□□□□□ -0.31
RGD1P38339 PCH2YBR186W 1695 nt13.08□□□□□ -0.31
RGD1P38339 IRC15YPL017C 1500 nt13.07□□□□□ -0.32
RGD1P38339 CCT6YDR188W 1641 nt13.06□□□□□ -0.32
RGD1P38339 SCC4YER147C 1875 nt13.06□□□□□ -0.32
RGD1P38339 GUT2YIL155C 1950 nt13.06□□□□□ -0.32
RGD1P38339 SUF2tP(AGG)C 72 nt13.04□□□□□ -0.32
RGD1P38339 SUF10tP(AGG)N 72 nt13.04□□□□□ -0.32
RGD1P38339 ALF1YNL148C 765 nt13.04□□□□□ -0.32
RGD1P38339 IMP2'YIL154C 1041 nt13.01□□□□□ -0.33
RGD1P38339 GIS3YLR094C 1509 nt12.98□□□□□ -0.33
RGD1P38339 SEC11YIR022W 504 nt12.97□□□□□ -0.33
RGD1P38339 YLR154C-GYLR154C-G 150 nt12.95□□□□□ -0.34
RGD1P38339 SIS1YNL007C 1059 nt12.94□□□□□ -0.34
RGD1P38339 PIB2YGL023C 1908 nt12.92□□□□□ -0.34
RGD1P38339 DSK2YMR276W 1122 nt12.92□□□□□ -0.34
RGD1P38339 NVJ2YPR091C 2313 nt12.87□□□□□ -0.35
RGD1P38339 YSC84YHR016C 1407 nt12.86□□□□□ -0.35
RGD1P38339 GFD2YCL036W 1701 nt12.85□□□□□ -0.35
RGD1P38339 FMP45YDL222C 930 nt12.84□□□□□ -0.35
RGD1P38339 ART5YGR068C 1761 nt12.83□□□□□ -0.36
RGD1P38339 YHL050CYHL050C 2094 nt12.82□□□□□ -0.36
RGD1P38339 RTS2YOR077W 699 nt12.8□□□□□ -0.36
RGD1P38339 YCH1YGR203W 447 nt12.77□□□□□ -0.37
RGD1P38339 YJL152WYJL152W 360 nt12.77□□□□□ -0.37
RGD1P38339 YLR236CYLR236C 324 nt12.72□□□□□ -0.37
RGD1P38339 YPR011CYPR011C 981 nt12.71□□□□□ -0.37
RGD1P38339 RRT12YCR045C 1476 nt12.71□□□□□ -0.38
RGD1P38339 RTF1YGL244W 1677 nt12.7□□□□□ -0.38
RGD1P38339 IDH1YNL037C 1083 nt12.7□□□□□ -0.38
RGD1P38339 PET9YBL030C 957 nt12.65□□□□□ -0.38
RGD1P38339 MRPL8YJL063C 717 nt12.64□□□□□ -0.39
RGD1P38339 CUE1YMR264W 612 nt12.62□□□□□ -0.39
RGD1P38339 ERV46YAL042W 1248 nt12.59□□□□□ -0.39
RGD1P38339 PTK1YKL198C 1989 nt12.59□□□□□ -0.39
RGD1P38339 TIR4YOR009W 1464 nt12.56□□□□□ -0.4
RGD1P38339 BOP3YNL042W 1191 nt12.55□□□□□ -0.4
RGD1P38339 YDR433WYDR433W 441 nt12.52□□□□□ -0.41
RGD1P38339 ADO1YJR105W 1023 nt12.51□□□□□ -0.41
RGD1P38339 LPX1YOR084W 1164 nt12.51□□□□□ -0.41
RGD1P38339 GBP2YCL011C 1284 nt12.5□□□□□ -0.41
RGD1P38339 YKR040CYKR040C 504 nt12.49□□□□□ -0.41
RGD1P38339 YMR057CYMR057C 372 nt12.48□□□□□ -0.41
RGD1P38339 YNL195CYNL195C 786 nt12.46□□□□□ -0.41
RGD1P38339 FPS1YLL043W 2010 nt12.45□□□□□ -0.42
RGD1P38339 YCL048W-AYCL048W-A 240 nt12.45□□□□□ -0.42
RGD1P38339 NCP1YHR042W 2076 nt12.44□□□□□ -0.42
RGD1P38339 YIL100WYIL100W 354 nt12.42□□□□□ -0.42
RGD1P38339 YEL076C-AYEL076C-A 651 nt12.37□□□□□ -0.43
RGD1P38339 YEL076CYEL076C 651 nt12.37□□□□□ -0.43
RGD1P38339 YLR464WYLR464W 651 nt12.37□□□□□ -0.43
RGD1P38339 TCD2YKL027W 1344 nt12.35□□□□□ -0.43
RGD1P38339 SPP1YPL138C 1062 nt12.33□□□□□ -0.44
RGD1P38339 MXR2YCL033C 507 nt12.28□□□□□ -0.44
RGD1P38339 RTG1YOL067C 534 nt12.27□□□□□ -0.45
RGD1P38339 YFL054CYFL054C 1941 nt12.25□□□□□ -0.45
RGD1P38339 SPT8YLR055C 1809 nt12.21□□□□□ -0.45
RGD1P38339 HUA1YGR268C 597 nt12.2□□□□□ -0.46
RGD1P38339 LCB1YMR296C 1677 nt12.19□□□□□ -0.46
RGD1P38339 YCL042WYCL042W 360 nt12.14□□□□□ -0.47
RGD1P38339 BOR1YNL275W 1731 nt12.13□□□□□ -0.47
RGD1P38339 RRD1YIL153W 1182 nt12.1□□□□□ -0.47
RGD1P38339 FRD1YEL047C 1413 nt12.1□□□□□ -0.47
RGD1P38339 DED1YOR204W 1815 nt12.09□□□□□ -0.47
RGD1P38339 YLR235CYLR235C 399 nt12.06□□□□□ -0.48
RGD1P38339 UBX6YJL048C 1191 nt12.05□□□□□ -0.48
RGD1P38339 UME6YDR207C 2511 nt12.05□□□□□ -0.48
RGD1P38339 FMP52YER004W 696 nt12.04□□□□□ -0.48
RGD1P38339 SOR2YDL246C 1074 nt12.03□□□□□ -0.48
RGD1P38339 SOR1YJR159W 1074 nt12.03□□□□□ -0.48
RGD1P38339 YKL030WYKL030W 606 nt12.01□□□□□ -0.49
RGD1P38339 SWE1YJL187C 2460 nt11.98□□□□□ -0.49
RGD1P38339 YDR094WYDR094W 336 nt11.98□□□□□ -0.49
RGD1P38339 LYS4YDR234W 2082 nt11.96□□□□□ -0.5
RGD1P38339 PTH1YHR189W 573 nt11.95□□□□□ -0.5
RGD1P38339 FMT1YBL013W 1206 nt11.94□□□□□ -0.5
RGD1P38339 HSP60YLR259C 1719 nt11.9□□□□□ -0.5
RGD1P38339 CWP1YKL096W 720 nt11.88□□□□□ -0.51
RGD1P38339 SIM1YIL123W 1431 nt11.86□□□□□ -0.51
RGD1P38339 PCM1YEL058W 1674 nt11.84□□□□□ -0.51
RGD1P38339 ADH2YMR303C 1047 nt11.8□□□□□ -0.52
RGD1P38339 SNF6YHL025W 999 nt11.79□□□□□ -0.52
RGD1P38339 TIM23YNR017W 669 nt11.78□□□□□ -0.52
RGD1P38339 DIC1YLR348C 897 nt11.75□□□□□ -0.53
RGD1P38339 BIO4YNR057C 714 nt11.75□□□□□ -0.53
RGD1P38339 MCH5YOR306C 1566 nt11.75□□□□□ -0.53
RGD1P38339 tL(GAG)GtL(GAG)G 82 nt11.74□□□□□ -0.53
RGD1P38339 ALG12YNR030W 1656 nt11.74□□□□□ -0.53
RGD1P38339 GLK1YCL040W 1503 nt11.72□□□□□ -0.53
RGD1P38339 YPR064WYPR064W 420 nt11.71□□□□□ -0.53
Retrieved 100 of 7,029 protein–RNA pairs in 13.9 ms