Protein–RNA interactions for Protein: P38210

LDB7, Chromatin structure-remodeling complex protein RSC14, yeastyeast

Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
LDB7P38210 IMT4tM(CAU)E 72 nt12.22□□□□□ -0.45
LDB7P38210 IMT3tM(CAU)J3 72 nt12.22□□□□□ -0.45
LDB7P38210 IMT1tM(CAU)O1 72 nt12.22□□□□□ -0.45
LDB7P38210 IMT2tM(CAU)P 72 nt12.22□□□□□ -0.45
LDB7P38210 PUS2YGL063W 1113 nt12.17□□□□□ -0.46
LDB7P38210 YJL152WYJL152W 360 nt12.15□□□□□ -0.46
LDB7P38210 SSA4YER103W 1929 nt12.14□□□□□ -0.47
LDB7P38210 TIR4YOR009W 1464 nt12.14□□□□□ -0.47
LDB7P38210 ART5YGR068C 1761 nt12.13□□□□□ -0.47
LDB7P38210 CAC2YML102W 1407 nt12.12□□□□□ -0.47
LDB7P38210 EMI2YDR516C 1503 nt12.1□□□□□ -0.47
LDB7P38210 GFD2YCL036W 1701 nt12.08□□□□□ -0.48
LDB7P38210 PET9YBL030C 957 nt12.06□□□□□ -0.48
LDB7P38210 YCH1YGR203W 447 nt12.05□□□□□ -0.48
LDB7P38210 YDL221WYDL221W 552 nt12.02□□□□□ -0.49
LDB7P38210 DSK2YMR276W 1122 nt12.02□□□□□ -0.49
LDB7P38210 YMR090WYMR090W 684 nt12.01□□□□□ -0.49
LDB7P38210 YMR057CYMR057C 372 nt11.99□□□□□ -0.49
LDB7P38210 IMP2'YIL154C 1041 nt11.98□□□□□ -0.49
LDB7P38210 YLR236CYLR236C 324 nt11.98□□□□□ -0.49
LDB7P38210 RTS2YOR077W 699 nt11.97□□□□□ -0.49
LDB7P38210 IRC15YPL017C 1500 nt11.95□□□□□ -0.5
LDB7P38210 IDH1YNL037C 1083 nt11.94□□□□□ -0.5
LDB7P38210 YPR011CYPR011C 981 nt11.93□□□□□ -0.5
LDB7P38210 YCL048W-AYCL048W-A 240 nt11.9□□□□□ -0.5
LDB7P38210 FMP45YDL222C 930 nt11.88□□□□□ -0.51
LDB7P38210 GIS3YLR094C 1509 nt11.86□□□□□ -0.51
LDB7P38210 SDH1YKL148C 1923 nt11.86□□□□□ -0.51
LDB7P38210 YBR220CYBR220C 1683 nt11.84□□□□□ -0.51
LDB7P38210 GBP2YCL011C 1284 nt11.83□□□□□ -0.52
LDB7P38210 FPS1YLL043W 2010 nt11.82□□□□□ -0.52
LDB7P38210 CUE1YMR264W 612 nt11.82□□□□□ -0.52
LDB7P38210 SCC4YER147C 1875 nt11.8□□□□□ -0.52
LDB7P38210 YDR433WYDR433W 441 nt11.78□□□□□ -0.52
LDB7P38210 LPX1YOR084W 1164 nt11.77□□□□□ -0.53
LDB7P38210 MOT3YMR070W 1473 nt11.76□□□□□ -0.53
LDB7P38210 ERV46YAL042W 1248 nt11.74□□□□□ -0.53
LDB7P38210 YIL100WYIL100W 354 nt11.7□□□□□ -0.54
LDB7P38210 TCD2YKL027W 1344 nt11.69□□□□□ -0.54
LDB7P38210 MXR2YCL033C 507 nt11.69□□□□□ -0.54
LDB7P38210 RRD1YIL153W 1182 nt11.65□□□□□ -0.54
LDB7P38210 YKR040CYKR040C 504 nt11.64□□□□□ -0.55
LDB7P38210 BDF1YLR399C 2061 nt11.64□□□□□ -0.55
LDB7P38210 DED1YOR204W 1815 nt11.63□□□□□ -0.55
LDB7P38210 SPP1YPL138C 1062 nt11.53□□□□□ -0.56
LDB7P38210 YNL195CYNL195C 786 nt11.52□□□□□ -0.57
LDB7P38210 YSC84YHR016C 1407 nt11.51□□□□□ -0.57
LDB7P38210 TAT1YBR069C 1860 nt11.51□□□□□ -0.57
LDB7P38210 FMT1YBL013W 1206 nt11.5□□□□□ -0.57
LDB7P38210 FMP52YER004W 696 nt11.49□□□□□ -0.57
LDB7P38210 RRT12YCR045C 1476 nt11.47□□□□□ -0.57
LDB7P38210 FRD1YEL047C 1413 nt11.47□□□□□ -0.57
LDB7P38210 YCL042WYCL042W 360 nt11.47□□□□□ -0.57
LDB7P38210 SOR2YDL246C 1074 nt11.45□□□□□ -0.58
LDB7P38210 SOR1YJR159W 1074 nt11.45□□□□□ -0.58
LDB7P38210 YHL050CYHL050C 2094 nt11.45□□□□□ -0.58
LDB7P38210 CWP1YKL096W 720 nt11.42□□□□□ -0.58
LDB7P38210 SEC11YIR022W 504 nt11.41□□□□□ -0.58
LDB7P38210 ADH2YMR303C 1047 nt11.39□□□□□ -0.59
LDB7P38210 PCM1YEL058W 1674 nt11.36□□□□□ -0.59
LDB7P38210 PCH2YBR186W 1695 nt11.33□□□□□ -0.6
LDB7P38210 SNF6YHL025W 999 nt11.32□□□□□ -0.6
LDB7P38210 PTH1YHR189W 573 nt11.3□□□□□ -0.6
LDB7P38210 RTG1YOL067C 534 nt11.28□□□□□ -0.6
LDB7P38210 MRPL8YJL063C 717 nt11.27□□□□□ -0.61
LDB7P38210 GUT2YIL155C 1950 nt11.27□□□□□ -0.61
LDB7P38210 YEL076C-AYEL076C-A 651 nt11.24□□□□□ -0.61
LDB7P38210 YEL076CYEL076C 651 nt11.24□□□□□ -0.61
LDB7P38210 YLR235CYLR235C 399 nt11.24□□□□□ -0.61
LDB7P38210 YLR464WYLR464W 651 nt11.24□□□□□ -0.61
LDB7P38210 DIC1YLR348C 897 nt11.21□□□□□ -0.61
LDB7P38210 SIM1YIL123W 1431 nt11.2□□□□□ -0.62
LDB7P38210 LCB1YMR296C 1677 nt11.18□□□□□ -0.62
LDB7P38210 YIH1YCR059C 777 nt11.18□□□□□ -0.62
LDB7P38210 ADO1YJR105W 1023 nt11.17□□□□□ -0.62
LDB7P38210 YKL030WYKL030W 606 nt11.17□□□□□ -0.62
LDB7P38210 BIO4YNR057C 714 nt11.17□□□□□ -0.62
LDB7P38210 RNQ1YCL028W 1218 nt11.17□□□□□ -0.62
LDB7P38210 RTF1YGL244W 1677 nt11.11□□□□□ -0.63
LDB7P38210 HUA1YGR268C 597 nt11.11□□□□□ -0.63
LDB7P38210 TIM23YNR017W 669 nt11.11□□□□□ -0.63
LDB7P38210 NCP1YHR042W 2076 nt11.1□□□□□ -0.63
LDB7P38210 BOP3YNL042W 1191 nt11.1□□□□□ -0.63
LDB7P38210 PIB2YGL023C 1908 nt11.09□□□□□ -0.63
LDB7P38210 YLL053CYLL053C 459 nt11.09□□□□□ -0.63
LDB7P38210 YLR179CYLR179C 606 nt11.06□□□□□ -0.64
LDB7P38210 FTR1YER145C 1215 nt11.02□□□□□ -0.65
LDB7P38210 GAL1YBR020W 1587 nt10.99□□□□□ -0.65
LDB7P38210 Q0182Q0182 405 nt10.99□□□□□ -0.65
LDB7P38210 ERF2YLR246W 1080 nt10.99□□□□□ -0.65
LDB7P38210 TRM5YHR070W 1500 nt10.97□□□□□ -0.65
LDB7P38210 YPR064WYPR064W 420 nt10.96□□□□□ -0.65
LDB7P38210 AQY1YPR192W 918 nt10.96□□□□□ -0.65
LDB7P38210 CRR1YLR213C 1269 nt10.95□□□□□ -0.66
LDB7P38210 ATF2YGR177C 1608 nt10.95□□□□□ -0.66
LDB7P38210 WSC2YNL283C 1512 nt10.94□□□□□ -0.66
LDB7P38210 LYS4YDR234W 2082 nt10.94□□□□□ -0.66
LDB7P38210 PTK1YKL198C 1989 nt10.92□□□□□ -0.66
LDB7P38210 AHT1YHR093W 549 nt10.92□□□□□ -0.66
LDB7P38210 YFL067WYFL067W 528 nt10.91□□□□□ -0.66
Retrieved 100 of 7,029 protein–RNA pairs in 12.4 ms