Protein–RNA interactions for Protein: P38203

LSM2, U6 snRNA-associated Sm-like protein LSm2, yeastyeast

Known RBP Predictions only

Length 95 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
LSM2P38203 YGR021WYGR021W 873 nt9.89□□□□□ -0.83
LSM2P38203 UME6YDR207C 2511 nt9.88□□□□□ -0.83
LSM2P38203 SUF2tP(AGG)C 72 nt9.87□□□□□ -0.83
LSM2P38203 SUF10tP(AGG)N 72 nt9.87□□□□□ -0.83
LSM2P38203 HOM6YJR139C 1080 nt9.86□□□□□ -0.83
LSM2P38203 YAL037C-BYAL037C-B 975 nt9.85□□□□□ -0.83
LSM2P38203 IRC15YPL017C 1500 nt9.83□□□□□ -0.84
LSM2P38203 SCC4YER147C 1875 nt9.78□□□□□ -0.84
LSM2P38203 GFD2YCL036W 1701 nt9.77□□□□□ -0.85
LSM2P38203 ART5YGR068C 1761 nt9.77□□□□□ -0.85
LSM2P38203 MNP1YGL068W 585 nt9.76□□□□□ -0.85
LSM2P38203 GIS3YLR094C 1509 nt9.75□□□□□ -0.85
LSM2P38203 RKM5YLR137W 1104 nt9.71□□□□□ -0.86
LSM2P38203 PET9YBL030C 957 nt9.69□□□□□ -0.86
LSM2P38203 RTS2YOR077W 699 nt9.67□□□□□ -0.86
LSM2P38203 YKL097CYKL097C 411 nt9.66□□□□□ -0.86
LSM2P38203 GUT2YIL155C 1950 nt9.65□□□□□ -0.86
LSM2P38203 TIR4YOR009W 1464 nt9.65□□□□□ -0.87
LSM2P38203 PCH2YBR186W 1695 nt9.64□□□□□ -0.87
LSM2P38203 SEC11YIR022W 504 nt9.64□□□□□ -0.87
LSM2P38203 YCH1YGR203W 447 nt9.63□□□□□ -0.87
LSM2P38203 CUE1YMR264W 612 nt9.6□□□□□ -0.87
LSM2P38203 YSC84YHR016C 1407 nt9.58□□□□□ -0.88
LSM2P38203 NPL3YDR432W 1245 nt9.55□□□□□ -0.88
LSM2P38203 YMR057CYMR057C 372 nt9.55□□□□□ -0.88
LSM2P38203 YHL050CYHL050C 2094 nt9.55□□□□□ -0.88
LSM2P38203 PIB2YGL023C 1908 nt9.5□□□□□ -0.89
LSM2P38203 RRT12YCR045C 1476 nt9.49□□□□□ -0.89
LSM2P38203 YLR154C-GYLR154C-G 150 nt9.47□□□□□ -0.89
LSM2P38203 YOL037CYOL037C 354 nt9.47□□□□□ -0.89
LSM2P38203 BOR1YNL275W 1731 nt9.45□□□□□ -0.9
LSM2P38203 YIL100WYIL100W 354 nt9.45□□□□□ -0.9
LSM2P38203 YJL152WYJL152W 360 nt9.43□□□□□ -0.9
LSM2P38203 YLR236CYLR236C 324 nt9.41□□□□□ -0.9
LSM2P38203 YNL195CYNL195C 786 nt9.41□□□□□ -0.9
LSM2P38203 RTF1YGL244W 1677 nt9.39□□□□□ -0.91
LSM2P38203 YOR139CYOR139C 393 nt9.38□□□□□ -0.91
LSM2P38203 YCL048W-AYCL048W-A 240 nt9.35□□□□□ -0.91
LSM2P38203 MCH5YOR306C 1566 nt9.34□□□□□ -0.91
LSM2P38203 BOP3YNL042W 1191 nt9.33□□□□□ -0.92
LSM2P38203 WHI5YOR083W 888 nt9.3□□□□□ -0.92
LSM2P38203 NCP1YHR042W 2076 nt9.29□□□□□ -0.92
LSM2P38203 PTK1YKL198C 1989 nt9.29□□□□□ -0.92
LSM2P38203 YLR281CYLR281C 468 nt9.28□□□□□ -0.92
LSM2P38203 RRD1YIL153W 1182 nt9.21□□□□□ -0.94
LSM2P38203 LCB1YMR296C 1677 nt9.18□□□□□ -0.94
LSM2P38203 IDH1YNL037C 1083 nt9.18□□□□□ -0.94
LSM2P38203 ALG12YNR030W 1656 nt9.17□□□□□ -0.94
LSM2P38203 GBP2YCL011C 1284 nt9.16□□□□□ -0.94
LSM2P38203 DED1YOR204W 1815 nt9.15□□□□□ -0.94
LSM2P38203 FMP52YER004W 696 nt9.13□□□□□ -0.95
LSM2P38203 TCD2YKL027W 1344 nt9.1□□□□□ -0.95
LSM2P38203 IMP2'YIL154C 1041 nt9.09□□□□□ -0.95
LSM2P38203 FMT1YBL013W 1206 nt9.09□□□□□ -0.95
LSM2P38203 PCM1YEL058W 1674 nt9.07□□□□□ -0.96
LSM2P38203 PUS2YGL063W 1113 nt9.07□□□□□ -0.96
LSM2P38203 DSK2YMR276W 1122 nt9.07□□□□□ -0.96
LSM2P38203 YFL054CYFL054C 1941 nt9.06□□□□□ -0.96
LSM2P38203 tM(CAU)CtM(CAU)C 72 nt9.03□□□□□ -0.96
LSM2P38203 IMT4tM(CAU)E 72 nt9.03□□□□□ -0.96
LSM2P38203 IMT3tM(CAU)J3 72 nt9.03□□□□□ -0.96
LSM2P38203 IMT1tM(CAU)O1 72 nt9.03□□□□□ -0.96
LSM2P38203 IMT2tM(CAU)P 72 nt9.03□□□□□ -0.96
LSM2P38203 YPR011CYPR011C 981 nt9.03□□□□□ -0.96
LSM2P38203 SIM1YIL123W 1431 nt9.03□□□□□ -0.96
LSM2P38203 SPT8YLR055C 1809 nt9.02□□□□□ -0.97
LSM2P38203 ADH2YMR303C 1047 nt9.01□□□□□ -0.97
LSM2P38203 LYS4YDR234W 2082 nt9.01□□□□□ -0.97
LSM2P38203 FMP45YDL222C 930 nt9□□□□□ -0.97
LSM2P38203 YDR433WYDR433W 441 nt8.99□□□□□ -0.97
LSM2P38203 CWP1YKL096W 720 nt8.99□□□□□ -0.97
LSM2P38203 MXR2YCL033C 507 nt8.99□□□□□ -0.97
LSM2P38203 BIO4YNR057C 714 nt8.98□□□□□ -0.97
LSM2P38203 SOR2YDL246C 1074 nt8.97□□□□□ -0.97
LSM2P38203 SOR1YJR159W 1074 nt8.97□□□□□ -0.97
LSM2P38203 HSP60YLR259C 1719 nt8.97□□□□□ -0.97
LSM2P38203 SNF6YHL025W 999 nt8.96□□□□□ -0.98
LSM2P38203 ERV46YAL042W 1248 nt8.95□□□□□ -0.98
LSM2P38203 LPX1YOR084W 1164 nt8.92□□□□□ -0.98
LSM2P38203 YCL042WYCL042W 360 nt8.9□□□□□ -0.98
LSM2P38203 YKR040CYKR040C 504 nt8.89□□□□□ -0.99
LSM2P38203 FRD1YEL047C 1413 nt8.88□□□□□ -0.99
LSM2P38203 YIH1YCR059C 777 nt8.88□□□□□ -0.99
LSM2P38203 SWE1YJL187C 2460 nt8.88□□□□□ -0.99
LSM2P38203 CRR1YLR213C 1269 nt8.85□□□□□ -0.99
LSM2P38203 ERF2YLR246W 1080 nt8.85□□□□□ -0.99
LSM2P38203 YLL053CYLL053C 459 nt8.83□□□□□ -1
LSM2P38203 RNQ1YCL028W 1218 nt8.83□□□□□ -1
LSM2P38203 HSL7YBR133C 2484 nt8.83□□□□□ -1
LSM2P38203 RDN25-1RDN25-1 3396 nt8.81□□□□□ -1
LSM2P38203 RDN25-2RDN25-2 3396 nt8.81□□□□□ -1
LSM2P38203 NAR1YNL240C 1476 nt8.8□□□□□ -1
LSM2P38203 ATF2YGR177C 1608 nt8.78□□□□□ -1
LSM2P38203 YHR056W-AYHR056W-A 435 nt8.77□□□□□ -1.01
LSM2P38203 MIC10YCL057C-A 294 nt8.75□□□□□ -1.01
LSM2P38203 HEM12YDR047W 1089 nt8.74□□□□□ -1.01
LSM2P38203 FTR1YER145C 1215 nt8.74□□□□□ -1.01
LSM2P38203 DIC1YLR348C 897 nt8.74□□□□□ -1.01
LSM2P38203 GLK1YCL040W 1503 nt8.74□□□□□ -1.01
LSM2P38203 SNG1YGR197C 1644 nt8.72□□□□□ -1.01
Retrieved 100 of 7,029 protein–RNA pairs in 61.1 ms