Protein–RNA interactions for Protein: P25441

RPC53, DNA-directed RNA polymerase III subunit RPC4, yeast

Predictions only

Length 422 aa.

Protein		RNA				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	UniProt Accession	Gene	Ensembl Transcript ID	Length	Transcript Status	Prediction Score	Prediction z-Score	Detected Interaction
RPC53	P25441	RPP2A	YOL039W	321 nt		13.57	□□□□□ -0.24
RPC53	P25441	SIS1	YNL007C	1059 nt		13.55	□□□□□ -0.24
RPC53	P25441	WHI5	YOR083W	888 nt		13.54	□□□□□ -0.24
RPC53	P25441	PTP1	YDL230W	1008 nt		13.52	□□□□□ -0.25
RPC53	P25441	PUS2	YGL063W	1113 nt		13.49	□□□□□ -0.25
RPC53	P25441	EMI2	YDR516C	1503 nt		13.46	□□□□□ -0.25
RPC53	P25441	YLR154C-G	YLR154C-G	150 nt		13.46	□□□□□ -0.25
RPC53	P25441	CAC2	YML102W	1407 nt		13.44	□□□□□ -0.26
RPC53	P25441	YMR090W	YMR090W	684 nt		13.39	□□□□□ -0.27
RPC53	P25441	YDL221W	YDL221W	552 nt		13.36	□□□□□ -0.27
RPC53	P25441	ART5	YGR068C	1761 nt		13.35	□□□□□ -0.27
RPC53	P25441	YJL152W	YJL152W	360 nt		13.32	□□□□□ -0.28
RPC53	P25441	IMP2'	YIL154C	1041 nt		13.31	□□□□□ -0.28
RPC53	P25441	DSK2	YMR276W	1122 nt		13.3	□□□□□ -0.28
RPC53	P25441	GFD2	YCL036W	1701 nt		13.3	□□□□□ -0.28
RPC53	P25441	PET9	YBL030C	957 nt		13.28	□□□□□ -0.28
RPC53	P25441	TIR4	YOR009W	1464 nt		13.28	□□□□□ -0.28
RPC53	P25441	YBR220C	YBR220C	1683 nt		13.24	□□□□□ -0.29
RPC53	P25441	YCH1	YGR203W	447 nt		13.24	□□□□□ -0.29
RPC53	P25441	IRC15	YPL017C	1500 nt		13.23	□□□□□ -0.29
RPC53	P25441	SDH1	YKL148C	1923 nt		13.21	□□□□□ -0.29
RPC53	P25441	YLR236C	YLR236C	324 nt		13.21	□□□□□ -0.29
RPC53	P25441	FMP45	YDL222C	930 nt		13.17	□□□□□ -0.3
RPC53	P25441	RTS2	YOR077W	699 nt		13.17	□□□□□ -0.3
RPC53	P25441	BDF1	YLR399C	2061 nt		13.17	□□□□□ -0.3
RPC53	P25441	IDH1	YNL037C	1083 nt		13.16	□□□□□ -0.3
RPC53	P25441	GIS3	YLR094C	1509 nt		13.15	□□□□□ -0.3
RPC53	P25441	YMR057C	YMR057C	372 nt		13.15	□□□□□ -0.3
RPC53	P25441	YPR011C	YPR011C	981 nt		13.14	□□□□□ -0.31
RPC53	P25441	SCC4	YER147C	1875 nt		13.12	□□□□□ -0.31
RPC53	P25441	Q0182	Q0182	405 nt		13.12	□□□□□ -0.31
RPC53	P25441	MOT3	YMR070W	1473 nt		13.1	□□□□□ -0.31
RPC53	P25441	YCL048W-A	YCL048W-A	240 nt		13.05	□□□□□ -0.32
RPC53	P25441	CUE1	YMR264W	612 nt		13.04	□□□□□ -0.32
RPC53	P25441	GBP2	YCL011C	1284 nt		13.01	□□□□□ -0.33
RPC53	P25441	FPS1	YLL043W	2010 nt		13	□□□□□ -0.33
RPC53	P25441	TAT1	YBR069C	1860 nt		12.99	□□□□□ -0.33
RPC53	P25441	ERV46	YAL042W	1248 nt		12.99	□□□□□ -0.33
RPC53	P25441	YDR433W	YDR433W	441 nt		12.98	□□□□□ -0.33
RPC53	P25441	LPX1	YOR084W	1164 nt		12.97	□□□□□ -0.33
RPC53	P25441	YIL100W	YIL100W	354 nt		12.9	□□□□□ -0.34
RPC53	P25441	YKR040C	YKR040C	504 nt		12.87	□□□□□ -0.35
RPC53	P25441	TCD2	YKL027W	1344 nt		12.86	□□□□□ -0.35
RPC53	P25441	MXR2	YCL033C	507 nt		12.83	□□□□□ -0.36
RPC53	P25441	YSC84	YHR016C	1407 nt		12.81	□□□□□ -0.36
RPC53	P25441	SEC11	YIR022W	504 nt		12.79	□□□□□ -0.36
RPC53	P25441	YNL195C	YNL195C	786 nt		12.78	□□□□□ -0.36
RPC53	P25441	RRT12	YCR045C	1476 nt		12.75	□□□□□ -0.37
RPC53	P25441	YHL050C	YHL050C	2094 nt		12.74	□□□□□ -0.37
RPC53	P25441	RRD1	YIL153W	1182 nt		12.74	□□□□□ -0.37
RPC53	P25441	PCH2	YBR186W	1695 nt		12.73	□□□□□ -0.37
RPC53	P25441	DED1	YOR204W	1815 nt		12.72	□□□□□ -0.37
RPC53	P25441	SPP1	YPL138C	1062 nt		12.72	□□□□□ -0.37
RPC53	P25441	MRPL8	YJL063C	717 nt		12.66	□□□□□ -0.38
RPC53	P25441	GUT2	YIL155C	1950 nt		12.66	□□□□□ -0.38
RPC53	P25441	FMP52	YER004W	696 nt		12.62	□□□□□ -0.39
RPC53	P25441	YCL042W	YCL042W	360 nt		12.62	□□□□□ -0.39
RPC53	P25441	FRD1	YEL047C	1413 nt		12.62	□□□□□ -0.39
RPC53	P25441	SOR2	YDL246C	1074 nt		12.59	□□□□□ -0.39
RPC53	P25441	SOR1	YJR159W	1074 nt		12.59	□□□□□ -0.39
RPC53	P25441	FMT1	YBL013W	1206 nt		12.57	□□□□□ -0.4
RPC53	P25441	YEL076C-A	YEL076C-A	651 nt		12.54	□□□□□ -0.4
RPC53	P25441	YEL076C	YEL076C	651 nt		12.54	□□□□□ -0.4
RPC53	P25441	ADO1	YJR105W	1023 nt		12.54	□□□□□ -0.4
RPC53	P25441	YLR464W	YLR464W	651 nt		12.54	□□□□□ -0.4
RPC53	P25441	RTG1	YOL067C	534 nt		12.53	□□□□□ -0.4
RPC53	P25441	CWP1	YKL096W	720 nt		12.49	□□□□□ -0.41
RPC53	P25441	PCM1	YEL058W	1674 nt		12.48	□□□□□ -0.41
RPC53	P25441	PIB2	YGL023C	1908 nt		12.46	□□□□□ -0.42
RPC53	P25441	RTF1	YGL244W	1677 nt		12.45	□□□□□ -0.42
RPC53	P25441	ADH2	YMR303C	1047 nt		12.45	□□□□□ -0.42
RPC53	P25441	YLR235C	YLR235C	399 nt		12.43	□□□□□ -0.42
RPC53	P25441	PTH1	YHR189W	573 nt		12.42	□□□□□ -0.42
RPC53	P25441	BOP3	YNL042W	1191 nt		12.42	□□□□□ -0.42
RPC53	P25441	SNF6	YHL025W	999 nt		12.4	□□□□□ -0.42
RPC53	P25441	NCP1	YHR042W	2076 nt		12.38	□□□□□ -0.43
RPC53	P25441	HUA1	YGR268C	597 nt		12.38	□□□□□ -0.43
RPC53	P25441	LCB1	YMR296C	1677 nt		12.38	□□□□□ -0.43
RPC53	P25441	YKL030W	YKL030W	606 nt		12.36	□□□□□ -0.43
RPC53	P25441	SIM1	YIL123W	1431 nt		12.34	□□□□□ -0.43
RPC53	P25441	DIC1	YLR348C	897 nt		12.31	□□□□□ -0.44
RPC53	P25441	BIO4	YNR057C	714 nt		12.28	□□□□□ -0.44
RPC53	P25441	PAC11	YDR488C	1602 nt		12.28	□□□□□ -0.44
RPC53	P25441	PTK1	YKL198C	1989 nt		12.26	□□□□□ -0.45
RPC53	P25441	YIH1	YCR059C	777 nt		12.25	□□□□□ -0.45
RPC53	P25441	RNQ1	YCL028W	1218 nt		12.25	□□□□□ -0.45
RPC53	P25441	TIM23	YNR017W	669 nt		12.24	□□□□□ -0.45
RPC53	P25441	YLR179C	YLR179C	606 nt		12.17	□□□□□ -0.46
RPC53	P25441	YLL053C	YLL053C	459 nt		12.16	□□□□□ -0.46
RPC53	P25441	LYS4	YDR234W	2082 nt		12.12	□□□□□ -0.47
RPC53	P25441	ERF2	YLR246W	1080 nt		12.1	□□□□□ -0.47
RPC53	P25441	YPR064W	YPR064W	420 nt		12.09	□□□□□ -0.47
RPC53	P25441	NVJ2	YPR091C	2313 nt		12.08	□□□□□ -0.48
RPC53	P25441	UBX6	YJL048C	1191 nt		12.08	□□□□□ -0.48
RPC53	P25441	YDR094W	YDR094W	336 nt		12.07	□□□□□ -0.48
RPC53	P25441	FTR1	YER145C	1215 nt		12.07	□□□□□ -0.48
RPC53	P25441	tL(GAG)G	tL(GAG)G	82 nt		12.07	□□□□□ -0.48
RPC53	P25441	AQY1	YPR192W	918 nt		12.07	□□□□□ -0.48
RPC53	P25441	YFL054C	YFL054C	1941 nt		12.06	□□□□□ -0.48
RPC53	P25441	CRR1	YLR213C	1269 nt		12.05	□□□□□ -0.48

Retrieved 100 of 7,029 protein–RNA pairs in 35.2 ms