Protein–RNA interactions for Protein: P20448

HCA4, ATP-dependent RNA helicase HCA4, yeastyeast

Known RBP Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
HCA4P20448 tM(CAU)CtM(CAU)C 72 nt13.99□□□□□ -0.17
HCA4P20448 IMT4tM(CAU)E 72 nt13.99□□□□□ -0.17
HCA4P20448 IMT3tM(CAU)J3 72 nt13.99□□□□□ -0.17
HCA4P20448 IMT1tM(CAU)O1 72 nt13.99□□□□□ -0.17
HCA4P20448 IMT2tM(CAU)P 72 nt13.99□□□□□ -0.17
HCA4P20448 YLR154C-GYLR154C-G 150 nt13.99□□□□□ -0.17
HCA4P20448 EMI2YDR516C 1503 nt13.94□□□□□ -0.18
HCA4P20448 ART5YGR068C 1761 nt13.94□□□□□ -0.18
HCA4P20448 TIR4YOR009W 1464 nt13.93□□□□□ -0.18
HCA4P20448 GFD2YCL036W 1701 nt13.9□□□□□ -0.18
HCA4P20448 PUS2YGL063W 1113 nt13.87□□□□□ -0.19
HCA4P20448 YDL221WYDL221W 552 nt13.86□□□□□ -0.19
HCA4P20448 YCH1YGR203W 447 nt13.86□□□□□ -0.19
HCA4P20448 PET9YBL030C 957 nt13.86□□□□□ -0.19
HCA4P20448 IRC15YPL017C 1500 nt13.81□□□□□ -0.2
HCA4P20448 YJL152WYJL152W 360 nt13.79□□□□□ -0.2
HCA4P20448 YMR090WYMR090W 684 nt13.76□□□□□ -0.21
HCA4P20448 YMR057CYMR057C 372 nt13.74□□□□□ -0.21
HCA4P20448 YPR011CYPR011C 981 nt13.73□□□□□ -0.21
HCA4P20448 YBR220CYBR220C 1683 nt13.72□□□□□ -0.21
HCA4P20448 YLR236CYLR236C 324 nt13.7□□□□□ -0.22
HCA4P20448 SDH1YKL148C 1923 nt13.69□□□□□ -0.22
HCA4P20448 DSK2YMR276W 1122 nt13.69□□□□□ -0.22
HCA4P20448 RTS2YOR077W 699 nt13.69□□□□□ -0.22
HCA4P20448 GIS3YLR094C 1509 nt13.69□□□□□ -0.22
HCA4P20448 IMP2'YIL154C 1041 nt13.66□□□□□ -0.22
HCA4P20448 FPS1YLL043W 2010 nt13.64□□□□□ -0.23
HCA4P20448 SCC4YER147C 1875 nt13.6□□□□□ -0.23
HCA4P20448 BDF1YLR399C 2061 nt13.6□□□□□ -0.23
HCA4P20448 CUE1YMR264W 612 nt13.59□□□□□ -0.23
HCA4P20448 IDH1YNL037C 1083 nt13.58□□□□□ -0.24
HCA4P20448 YCL048W-AYCL048W-A 240 nt13.54□□□□□ -0.24
HCA4P20448 FMP45YDL222C 930 nt13.5□□□□□ -0.25
HCA4P20448 GBP2YCL011C 1284 nt13.49□□□□□ -0.25
HCA4P20448 ERV46YAL042W 1248 nt13.46□□□□□ -0.25
HCA4P20448 LPX1YOR084W 1164 nt13.44□□□□□ -0.26
HCA4P20448 Q0182Q0182 405 nt13.42□□□□□ -0.26
HCA4P20448 RRD1YIL153W 1182 nt13.41□□□□□ -0.26
HCA4P20448 TAT1YBR069C 1860 nt13.41□□□□□ -0.26
HCA4P20448 DED1YOR204W 1815 nt13.4□□□□□ -0.26
HCA4P20448 YDR433WYDR433W 441 nt13.39□□□□□ -0.27
HCA4P20448 MOT3YMR070W 1473 nt13.38□□□□□ -0.27
HCA4P20448 MXR2YCL033C 507 nt13.36□□□□□ -0.27
HCA4P20448 YIL100WYIL100W 354 nt13.35□□□□□ -0.27
HCA4P20448 TCD2YKL027W 1344 nt13.34□□□□□ -0.27
HCA4P20448 YKR040CYKR040C 504 nt13.33□□□□□ -0.28
HCA4P20448 FMT1YBL013W 1206 nt13.28□□□□□ -0.28
HCA4P20448 YHL050CYHL050C 2094 nt13.25□□□□□ -0.29
HCA4P20448 YSC84YHR016C 1407 nt13.25□□□□□ -0.29
HCA4P20448 RRT12YCR045C 1476 nt13.24□□□□□ -0.29
HCA4P20448 SPP1YPL138C 1062 nt13.2□□□□□ -0.3
HCA4P20448 FMP52YER004W 696 nt13.18□□□□□ -0.3
HCA4P20448 FRD1YEL047C 1413 nt13.18□□□□□ -0.3
HCA4P20448 SEC11YIR022W 504 nt13.17□□□□□ -0.3
HCA4P20448 SOR2YDL246C 1074 nt13.15□□□□□ -0.3
HCA4P20448 SOR1YJR159W 1074 nt13.15□□□□□ -0.3
HCA4P20448 YNL195CYNL195C 786 nt13.15□□□□□ -0.3
HCA4P20448 PCH2YBR186W 1695 nt13.12□□□□□ -0.31
HCA4P20448 GUT2YIL155C 1950 nt13.08□□□□□ -0.32
HCA4P20448 ADH2YMR303C 1047 nt13.06□□□□□ -0.32
HCA4P20448 PCM1YEL058W 1674 nt13.05□□□□□ -0.32
HCA4P20448 CWP1YKL096W 720 nt13.05□□□□□ -0.32
HCA4P20448 YCL042WYCL042W 360 nt13.05□□□□□ -0.32
HCA4P20448 PIB2YGL023C 1908 nt12.98□□□□□ -0.33
HCA4P20448 RTG1YOL067C 534 nt12.95□□□□□ -0.34
HCA4P20448 NCP1YHR042W 2076 nt12.93□□□□□ -0.34
HCA4P20448 SNF6YHL025W 999 nt12.93□□□□□ -0.34
HCA4P20448 LCB1YMR296C 1677 nt12.92□□□□□ -0.34
HCA4P20448 YIH1YCR059C 777 nt12.87□□□□□ -0.35
HCA4P20448 PTH1YHR189W 573 nt12.87□□□□□ -0.35
HCA4P20448 MRPL8YJL063C 717 nt12.85□□□□□ -0.35
HCA4P20448 RTF1YGL244W 1677 nt12.84□□□□□ -0.35
HCA4P20448 BIO4YNR057C 714 nt12.84□□□□□ -0.35
HCA4P20448 RNQ1YCL028W 1218 nt12.83□□□□□ -0.36
HCA4P20448 SIM1YIL123W 1431 nt12.82□□□□□ -0.36
HCA4P20448 YEL076C-AYEL076C-A 651 nt12.81□□□□□ -0.36
HCA4P20448 YEL076CYEL076C 651 nt12.81□□□□□ -0.36
HCA4P20448 YLR235CYLR235C 399 nt12.81□□□□□ -0.36
HCA4P20448 DIC1YLR348C 897 nt12.81□□□□□ -0.36
HCA4P20448 YLR464WYLR464W 651 nt12.81□□□□□ -0.36
HCA4P20448 BOP3YNL042W 1191 nt12.8□□□□□ -0.36
HCA4P20448 YKL030WYKL030W 606 nt12.75□□□□□ -0.37
HCA4P20448 YLL053CYLL053C 459 nt12.74□□□□□ -0.37
HCA4P20448 PTK1YKL198C 1989 nt12.72□□□□□ -0.37
HCA4P20448 PAC11YDR488C 1602 nt12.71□□□□□ -0.37
HCA4P20448 ADO1YJR105W 1023 nt12.69□□□□□ -0.38
HCA4P20448 TIM23YNR017W 669 nt12.69□□□□□ -0.38
HCA4P20448 LYS4YDR234W 2082 nt12.68□□□□□ -0.38
HCA4P20448 FTR1YER145C 1215 nt12.65□□□□□ -0.38
HCA4P20448 GAL1YBR020W 1587 nt12.61□□□□□ -0.39
HCA4P20448 HUA1YGR268C 597 nt12.61□□□□□ -0.39
HCA4P20448 YLR179CYLR179C 606 nt12.61□□□□□ -0.39
HCA4P20448 ATF2YGR177C 1608 nt12.6□□□□□ -0.39
HCA4P20448 CRR1YLR213C 1269 nt12.6□□□□□ -0.39
HCA4P20448 ERF2YLR246W 1080 nt12.6□□□□□ -0.39
HCA4P20448 WSC2YNL283C 1512 nt12.59□□□□□ -0.39
HCA4P20448 TRM5YHR070W 1500 nt12.57□□□□□ -0.4
HCA4P20448 AHT1YHR093W 549 nt12.57□□□□□ -0.4
HCA4P20448 NVJ2YPR091C 2313 nt12.56□□□□□ -0.4
HCA4P20448 AQY1YPR192W 918 nt12.55□□□□□ -0.4
Retrieved 100 of 7,029 protein–RNA pairs in 26.3 ms