Protein–RNA interactions for Protein: P20334

Tnfrsf9, Tumor necrosis factor receptor superfamily member 9, mousemouse

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf9P20334 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
Tnfrsf9P20334 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC22.06■■□□□ 1.12
Tnfrsf9P20334 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC22.06■■□□□ 1.12
Tnfrsf9P20334 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC22.04■■□□□ 1.12
Tnfrsf9P20334 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC22.04■■□□□ 1.12
Tnfrsf9P20334 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC22.03■■□□□ 1.12
Tnfrsf9P20334 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC22.03■■□□□ 1.12
Tnfrsf9P20334 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Tnfrsf9P20334 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC22■■□□□ 1.11
Tnfrsf9P20334 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC21.97■■□□□ 1.11
Tnfrsf9P20334 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
Tnfrsf9P20334 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Tnfrsf9P20334 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Tnfrsf9P20334 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC21.89■■□□□ 1.09
Tnfrsf9P20334 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC21.89■■□□□ 1.09
Tnfrsf9P20334 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Tnfrsf9P20334 Gm10524-201ENSMUST00000181931 1893 ntBASIC21.85■■□□□ 1.09
Tnfrsf9P20334 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.08
Tnfrsf9P20334 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
Tnfrsf9P20334 Zfp131-205ENSMUST00000223812 663 ntBASIC21.81■■□□□ 1.08
Tnfrsf9P20334 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Tnfrsf9P20334 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Tnfrsf9P20334 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC21.78■■□□□ 1.08
Tnfrsf9P20334 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Tnfrsf9P20334 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Tnfrsf9P20334 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC21.76■■□□□ 1.07
Tnfrsf9P20334 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Tnfrsf9P20334 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Tnfrsf9P20334 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.06
Tnfrsf9P20334 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC21.69■■□□□ 1.06
Tnfrsf9P20334 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Tnfrsf9P20334 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Tnfrsf9P20334 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Tnfrsf9P20334 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Tnfrsf9P20334 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC21.64■■□□□ 1.05
Tnfrsf9P20334 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC21.63■■□□□ 1.05
Tnfrsf9P20334 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC21.63■■□□□ 1.05
Tnfrsf9P20334 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Tnfrsf9P20334 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Tnfrsf9P20334 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Tnfrsf9P20334 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC21.59■■□□□ 1.05
Tnfrsf9P20334 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Tnfrsf9P20334 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Tnfrsf9P20334 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Tnfrsf9P20334 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Tnfrsf9P20334 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
Tnfrsf9P20334 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC21.54■■□□□ 1.04
Tnfrsf9P20334 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Tnfrsf9P20334 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Tnfrsf9P20334 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC21.49■■□□□ 1.03
Tnfrsf9P20334 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Tnfrsf9P20334 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Tnfrsf9P20334 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Tnfrsf9P20334 Gm42596-201ENSMUST00000196305 1958 ntBASIC21.39■■□□□ 1.01
Tnfrsf9P20334 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Tnfrsf9P20334 AC166822.3-201ENSMUST00000227394 661 ntBASIC21.37■■□□□ 1.01
Tnfrsf9P20334 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Tnfrsf9P20334 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Tnfrsf9P20334 CT025624.2-201ENSMUST00000223609 1909 ntBASIC21.35■■□□□ 1.01
Tnfrsf9P20334 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
Tnfrsf9P20334 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Tnfrsf9P20334 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Tnfrsf9P20334 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Tnfrsf9P20334 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Tnfrsf9P20334 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC21.32■■□□□ 1
Tnfrsf9P20334 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC21.3■■□□□ 1
Tnfrsf9P20334 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Tnfrsf9P20334 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC21.29■■□□□ 1
Tnfrsf9P20334 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC21.29■■□□□ 1
Tnfrsf9P20334 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Tnfrsf9P20334 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC21.27■□□□□ 0.99
Tnfrsf9P20334 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Tnfrsf9P20334 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
Tnfrsf9P20334 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
Tnfrsf9P20334 AL845457.1-201ENSMUST00000197244 68 ntBASIC21.23■□□□□ 0.99
Tnfrsf9P20334 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Tnfrsf9P20334 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC21.19■□□□□ 0.98
Tnfrsf9P20334 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Tnfrsf9P20334 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC21.18■□□□□ 0.98
Tnfrsf9P20334 Gm16148-201ENSMUST00000119653 893 ntBASIC21.17■□□□□ 0.98
Tnfrsf9P20334 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Tnfrsf9P20334 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.98
Tnfrsf9P20334 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC21.14■□□□□ 0.97
Tnfrsf9P20334 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Tnfrsf9P20334 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Tnfrsf9P20334 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC21.12■□□□□ 0.97
Tnfrsf9P20334 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Tnfrsf9P20334 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Tnfrsf9P20334 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Tnfrsf9P20334 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC21.09■□□□□ 0.97
Tnfrsf9P20334 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Tnfrsf9P20334 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
Tnfrsf9P20334 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
Tnfrsf9P20334 Tdp2-203ENSMUST00000223804 1136 ntBASIC21.06■□□□□ 0.96
Tnfrsf9P20334 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC21.04■□□□□ 0.96
Tnfrsf9P20334 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Tnfrsf9P20334 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Tnfrsf9P20334 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Tnfrsf9P20334 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC21■□□□□ 0.95
Tnfrsf9P20334 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 25.3 ms