Protein–RNA interactions for Protein: P0CX72

TY1A-LR2, Transposon Ty1-LR2 Gag polyprotein, yeastyeast

Predictions only

Length 440 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY1A-LR2P0CX72 ARO7YPR060C 771 nt10.27□□□□□ -0.77
TY1A-LR2P0CX72 TIR1YER011W 765 nt10.26□□□□□ -0.77
TY1A-LR2P0CX72 CLB6YGR109C 1143 nt10.24□□□□□ -0.77
TY1A-LR2P0CX72 MET8YBR213W 825 nt10.24□□□□□ -0.77
TY1A-LR2P0CX72 RRT12YCR045C 1476 nt10.23□□□□□ -0.77
TY1A-LR2P0CX72 FUN26YAL022C 1554 nt10.22□□□□□ -0.77
TY1A-LR2P0CX72 BOP3YNL042W 1191 nt10.21□□□□□ -0.77
TY1A-LR2P0CX72 YER088W-BYER088W-B 147 nt10.2□□□□□ -0.78
TY1A-LR2P0CX72 BOR1YNL275W 1731 nt10.19□□□□□ -0.78
TY1A-LR2P0CX72 SRB2YHR041C 633 nt10.16□□□□□ -0.78
TY1A-LR2P0CX72 ALF1YNL148C 765 nt10.15□□□□□ -0.78
TY1A-LR2P0CX72 SIS1YNL007C 1059 nt10.14□□□□□ -0.79
TY1A-LR2P0CX72 GFD2YCL036W 1701 nt10.13□□□□□ -0.79
TY1A-LR2P0CX72 YJL225CYJL225C 5277 nt10.12□□□□□ -0.79
TY1A-LR2P0CX72 RTS2YOR077W 699 nt10.1□□□□□ -0.79
TY1A-LR2P0CX72 NCP1YHR042W 2076 nt10.09□□□□□ -0.79
TY1A-LR2P0CX72 BDH2YAL061W 1254 nt10.08□□□□□ -0.8
TY1A-LR2P0CX72 ART5YGR068C 1761 nt10.08□□□□□ -0.8
TY1A-LR2P0CX72 MCH5YOR306C 1566 nt10.04□□□□□ -0.8
TY1A-LR2P0CX72 TRM9YML014W 840 nt10.01□□□□□ -0.81
TY1A-LR2P0CX72 SPT8YLR055C 1809 nt10□□□□□ -0.81
TY1A-LR2P0CX72 CCT6YDR188W 1641 nt10□□□□□ -0.81
TY1A-LR2P0CX72 YFL054CYFL054C 1941 nt9.99□□□□□ -0.81
TY1A-LR2P0CX72 CUE1YMR264W 612 nt9.97□□□□□ -0.81
TY1A-LR2P0CX72 ALG12YNR030W 1656 nt9.91□□□□□ -0.82
TY1A-LR2P0CX72 PET9YBL030C 957 nt9.91□□□□□ -0.82
TY1A-LR2P0CX72 YNL195CYNL195C 786 nt9.91□□□□□ -0.82
TY1A-LR2P0CX72 HSP60YLR259C 1719 nt9.88□□□□□ -0.83
TY1A-LR2P0CX72 RSB1YOR049C 1065 nt9.87□□□□□ -0.83
TY1A-LR2P0CX72 SUF2tP(AGG)C 72 nt9.86□□□□□ -0.83
TY1A-LR2P0CX72 SUF10tP(AGG)N 72 nt9.86□□□□□ -0.83
TY1A-LR2P0CX72 REG2YBR050C 1017 nt9.86□□□□□ -0.83
TY1A-LR2P0CX72 YEL009C-AYEL009C-A 408 nt9.83□□□□□ -0.84
TY1A-LR2P0CX72 LSM3YLR438C-A 270 nt9.79□□□□□ -0.84
TY1A-LR2P0CX72 YIL100WYIL100W 354 nt9.78□□□□□ -0.84
TY1A-LR2P0CX72 SWE1YJL187C 2460 nt9.77□□□□□ -0.85
TY1A-LR2P0CX72 TIR4YOR009W 1464 nt9.74□□□□□ -0.85
TY1A-LR2P0CX72 YJR154WYJR154W 1041 nt9.73□□□□□ -0.85
TY1A-LR2P0CX72 Q0010Q0010 387 nt9.73□□□□□ -0.85
TY1A-LR2P0CX72 LCB1YMR296C 1677 nt9.73□□□□□ -0.85
TY1A-LR2P0CX72 WWM1YFL010C 636 nt9.72□□□□□ -0.85
TY1A-LR2P0CX72 YCH1YGR203W 447 nt9.72□□□□□ -0.85
TY1A-LR2P0CX72 YMR057CYMR057C 372 nt9.72□□□□□ -0.85
TY1A-LR2P0CX72 RDN37-1RDN37-1 5354 nt9.71□□□□□ -0.85
TY1A-LR2P0CX72 RDN37-2RDN37-2 5354 nt9.71□□□□□ -0.85
TY1A-LR2P0CX72 ATS1YAL020C 1002 nt9.7□□□□□ -0.86
TY1A-LR2P0CX72 PAM17YKR065C 594 nt9.7□□□□□ -0.86
TY1A-LR2P0CX72 ARA2YMR041C 1008 nt9.69□□□□□ -0.86
TY1A-LR2P0CX72 GLK1YCL040W 1503 nt9.66□□□□□ -0.86
TY1A-LR2P0CX72 YLR236CYLR236C 324 nt9.63□□□□□ -0.87
TY1A-LR2P0CX72 YLR122CYLR122C 378 nt9.6□□□□□ -0.87
TY1A-LR2P0CX72 NAR1YNL240C 1476 nt9.59□□□□□ -0.87
TY1A-LR2P0CX72 LYS4YDR234W 2082 nt9.57□□□□□ -0.88
TY1A-LR2P0CX72 URH1YDR400W 1023 nt9.55□□□□□ -0.88
TY1A-LR2P0CX72 FRE6YLL051C 2139 nt9.53□□□□□ -0.88
TY1A-LR2P0CX72 FUR4YBR021W 1902 nt9.52□□□□□ -0.89
TY1A-LR2P0CX72 LCP5YER127W 1074 nt9.51□□□□□ -0.89
TY1A-LR2P0CX72 PAB1YER165W 1734 nt9.51□□□□□ -0.89
TY1A-LR2P0CX72 YFL021C-AYFL021C-A 855 nt9.5□□□□□ -0.89
TY1A-LR2P0CX72 TOM20YGR082W 552 nt9.49□□□□□ -0.89
TY1A-LR2P0CX72 HSL7YBR133C 2484 nt9.47□□□□□ -0.89
TY1A-LR2P0CX72 AI5_BETAQ0075 1065 nt9.45□□□□□ -0.9
TY1A-LR2P0CX72 DSK2YMR276W 1122 nt9.45□□□□□ -0.9
TY1A-LR2P0CX72 PBP1YGR178C 2169 nt9.45□□□□□ -0.9
TY1A-LR2P0CX72 BIO4YNR057C 714 nt9.44□□□□□ -0.9
TY1A-LR2P0CX72 BIO5YNR056C 1686 nt9.44□□□□□ -0.9
TY1A-LR2P0CX72 PRP4YPR178W 1398 nt9.42□□□□□ -0.9
TY1A-LR2P0CX72 AAC1YMR056C 930 nt9.42□□□□□ -0.9
TY1A-LR2P0CX72 ABZ2YMR289W 1125 nt9.42□□□□□ -0.9
TY1A-LR2P0CX72 DPS1YLL018C 1674 nt9.4□□□□□ -0.9
TY1A-LR2P0CX72 YEL076C-AYEL076C-A 651 nt9.39□□□□□ -0.91
TY1A-LR2P0CX72 YEL076CYEL076C 651 nt9.39□□□□□ -0.91
TY1A-LR2P0CX72 BUR6YER159C 429 nt9.39□□□□□ -0.91
TY1A-LR2P0CX72 YLR464WYLR464W 651 nt9.39□□□□□ -0.91
TY1A-LR2P0CX72 SNF1YDR477W 1902 nt9.37□□□□□ -0.91
TY1A-LR2P0CX72 YJL118WYJL118W 660 nt9.34□□□□□ -0.91
TY1A-LR2P0CX72 SIM1YIL123W 1431 nt9.33□□□□□ -0.92
TY1A-LR2P0CX72 NPL3YDR432W 1245 nt9.33□□□□□ -0.92
TY1A-LR2P0CX72 CYT2YKL087C 675 nt9.33□□□□□ -0.92
TY1A-LR2P0CX72 HOM6YJR139C 1080 nt9.32□□□□□ -0.92
TY1A-LR2P0CX72 RDN25-1RDN25-1 3396 nt9.31□□□□□ -0.92
TY1A-LR2P0CX72 RDN25-2RDN25-2 3396 nt9.31□□□□□ -0.92
TY1A-LR2P0CX72 CMP2YML057W 1815 nt9.3□□□□□ -0.92
TY1A-LR2P0CX72 YGR021WYGR021W 873 nt9.29□□□□□ -0.92
TY1A-LR2P0CX72 YCL048W-AYCL048W-A 240 nt9.28□□□□□ -0.92
TY1A-LR2P0CX72 COG1YGL223C 1254 nt9.27□□□□□ -0.93
TY1A-LR2P0CX72 CCA1YER168C 1641 nt9.27□□□□□ -0.93
TY1A-LR2P0CX72 PST2YDR032C 597 nt9.26□□□□□ -0.93
TY1A-LR2P0CX72 SRN2YLR119W 642 nt9.26□□□□□ -0.93
TY1A-LR2P0CX72 DED1YOR204W 1815 nt9.24□□□□□ -0.93
TY1A-LR2P0CX72 PCM1YEL058W 1674 nt9.23□□□□□ -0.93
TY1A-LR2P0CX72 YIR018C-AYIR018C-A 138 nt9.22□□□□□ -0.93
TY1A-LR2P0CX72 YKR005CYKR005C 1578 nt9.21□□□□□ -0.93
TY1A-LR2P0CX72 YHR056W-AYHR056W-A 435 nt9.21□□□□□ -0.94
TY1A-LR2P0CX72 YPL041CYPL041C 624 nt9.21□□□□□ -0.94
TY1A-LR2P0CX72 RRD1YIL153W 1182 nt9.2□□□□□ -0.94
TY1A-LR2P0CX72 YJL152WYJL152W 360 nt9.2□□□□□ -0.94
TY1A-LR2P0CX72 FTH1YBR207W 1398 nt9.2□□□□□ -0.94
TY1A-LR2P0CX72 BMT5YIL096C 1011 nt9.18□□□□□ -0.94
TY1A-LR2P0CX72 YAT1YAR035W 2064 nt9.18□□□□□ -0.94
Retrieved 100 of 7,029 protein–RNA pairs in 42.5 ms