Protein–RNA interactions for Protein: P04441

Cd74, H-2 class II histocompatibility antigen gamma chain, mousemouse

Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd74P04441 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
Cd74P04441 Gm26115-201ENSMUST00000175605 87 ntBASIC22.76■■□□□ 1.23
Cd74P04441 Gm10524-201ENSMUST00000181931 1893 ntBASIC22.75■■□□□ 1.23
Cd74P04441 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC22.71■■□□□ 1.23
Cd74P04441 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Cd74P04441 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Cd74P04441 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Cd74P04441 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC22.68■■□□□ 1.22
Cd74P04441 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC22.68■■□□□ 1.22
Cd74P04441 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC22.65■■□□□ 1.22
Cd74P04441 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
Cd74P04441 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC22.6■■□□□ 1.21
Cd74P04441 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Cd74P04441 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC22.59■■□□□ 1.21
Cd74P04441 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Cd74P04441 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Cd74P04441 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC22.56■■□□□ 1.2
Cd74P04441 Gm8109-201ENSMUST00000194076 746 ntBASIC22.54■■□□□ 1.2
Cd74P04441 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC22.53■■□□□ 1.2
Cd74P04441 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC22.53■■□□□ 1.2
Cd74P04441 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC22.52■■□□□ 1.2
Cd74P04441 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC22.49■■□□□ 1.19
Cd74P04441 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Cd74P04441 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC22.47■■□□□ 1.19
Cd74P04441 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
Cd74P04441 CT025624.2-201ENSMUST00000223609 1909 ntBASIC22.46■■□□□ 1.19
Cd74P04441 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC22.45■■□□□ 1.18
Cd74P04441 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC22.45■■□□□ 1.18
Cd74P04441 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Cd74P04441 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC22.4■■□□□ 1.18
Cd74P04441 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC22.36■■□□□ 1.17
Cd74P04441 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC22.35■■□□□ 1.17
Cd74P04441 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Cd74P04441 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC22.32■■□□□ 1.16
Cd74P04441 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Cd74P04441 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Cd74P04441 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Cd74P04441 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Cd74P04441 Gm17082-201ENSMUST00000166043 1091 ntBASIC22.25■■□□□ 1.15
Cd74P04441 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
Cd74P04441 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC22.21■■□□□ 1.15
Cd74P04441 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC22.21■■□□□ 1.15
Cd74P04441 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Cd74P04441 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC22.2■■□□□ 1.14
Cd74P04441 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC22.2■■□□□ 1.14
Cd74P04441 Gm27322-201ENSMUST00000184007 104 ntBASIC22.19■■□□□ 1.14
Cd74P04441 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Cd74P04441 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC22.18■■□□□ 1.14
Cd74P04441 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Cd74P04441 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Cd74P04441 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC22.15■■□□□ 1.14
Cd74P04441 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Cd74P04441 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Cd74P04441 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC22.13■■□□□ 1.13
Cd74P04441 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC22.12■■□□□ 1.13
Cd74P04441 Zxda-201ENSMUST00000117281 2621 ntBASIC22.09■■□□□ 1.13
Cd74P04441 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
Cd74P04441 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
Cd74P04441 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Cd74P04441 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Cd74P04441 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Cd74P04441 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC21.96■■□□□ 1.11
Cd74P04441 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.11
Cd74P04441 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Cd74P04441 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC21.94■■□□□ 1.1
Cd74P04441 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Cd74P04441 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC21.94■■□□□ 1.1
Cd74P04441 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Cd74P04441 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Cd74P04441 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
Cd74P04441 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Cd74P04441 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC21.87■■□□□ 1.09
Cd74P04441 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC21.84■■□□□ 1.09
Cd74P04441 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC21.83■■□□□ 1.09
Cd74P04441 Gm24804-201ENSMUST00000174982 85 ntBASIC21.83■■□□□ 1.09
Cd74P04441 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
Cd74P04441 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Cd74P04441 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Cd74P04441 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Cd74P04441 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
Cd74P04441 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Cd74P04441 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC21.77■■□□□ 1.08
Cd74P04441 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC21.76■■□□□ 1.07
Cd74P04441 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC21.76■■□□□ 1.07
Cd74P04441 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
Cd74P04441 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Cd74P04441 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Cd74P04441 AC166822.3-201ENSMUST00000227394 661 ntBASIC21.71■■□□□ 1.07
Cd74P04441 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Cd74P04441 AL845457.1-201ENSMUST00000197244 68 ntBASIC21.7■■□□□ 1.06
Cd74P04441 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Cd74P04441 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Cd74P04441 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Cd74P04441 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Cd74P04441 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC21.64■■□□□ 1.06
Cd74P04441 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Cd74P04441 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Cd74P04441 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Cd74P04441 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC21.63■■□□□ 1.05
Cd74P04441 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC21.62■■□□□ 1.05
Retrieved 100 of 76,532 protein–RNA pairs in 125.6 ms