Protein–RNA interactions for Protein: O35704

Sptlc1, Serine palmitoyltransferase 1, mousemouse

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sptlc1O35704 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
Sptlc1O35704 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC31.12■■■□□ 2.57
Sptlc1O35704 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC31.08■■■□□ 2.57
Sptlc1O35704 Gm17082-201ENSMUST00000166043 1091 ntBASIC31.06■■■□□ 2.56
Sptlc1O35704 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC31.06■■■□□ 2.56
Sptlc1O35704 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC31■■■□□ 2.55
Sptlc1O35704 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC30.97■■■□□ 2.55
Sptlc1O35704 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC30.9■■■□□ 2.54
Sptlc1O35704 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC30.87■■■□□ 2.53
Sptlc1O35704 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC30.84■■■□□ 2.53
Sptlc1O35704 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC30.81■■■□□ 2.52
Sptlc1O35704 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC30.78■■■□□ 2.52
Sptlc1O35704 Gm27322-201ENSMUST00000184007 104 ntBASIC30.77■■■□□ 2.52
Sptlc1O35704 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
Sptlc1O35704 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC30.67■■■□□ 2.5
Sptlc1O35704 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC30.66■■■□□ 2.5
Sptlc1O35704 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.5
Sptlc1O35704 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.5
Sptlc1O35704 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC30.6■■■□□ 2.49
Sptlc1O35704 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC30.58■■■□□ 2.49
Sptlc1O35704 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC30.57■■■□□ 2.48
Sptlc1O35704 Gm24804-201ENSMUST00000174982 85 ntBASIC30.54■■■□□ 2.48
Sptlc1O35704 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC30.54■■■□□ 2.48
Sptlc1O35704 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC30.54■■■□□ 2.48
Sptlc1O35704 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC30.51■■■□□ 2.47
Sptlc1O35704 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC30.44■■■□□ 2.46
Sptlc1O35704 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC30.43■■■□□ 2.46
Sptlc1O35704 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC30.42■■■□□ 2.46
Sptlc1O35704 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC30.4■■■□□ 2.46
Sptlc1O35704 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC30.4■■■□□ 2.46
Sptlc1O35704 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC30.39■■■□□ 2.46
Sptlc1O35704 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC30.37■■■□□ 2.45
Sptlc1O35704 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC30.37■■■□□ 2.45
Sptlc1O35704 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC30.31■■■□□ 2.44
Sptlc1O35704 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC30.31■■■□□ 2.44
Sptlc1O35704 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
Sptlc1O35704 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC30.28■■■□□ 2.44
Sptlc1O35704 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC30.22■■■□□ 2.43
Sptlc1O35704 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC30.19■■■□□ 2.42
Sptlc1O35704 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC30.17■■■□□ 2.42
Sptlc1O35704 AL845457.1-201ENSMUST00000197244 68 ntBASIC30.17■■■□□ 2.42
Sptlc1O35704 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC30.17■■■□□ 2.42
Sptlc1O35704 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC30.16■■■□□ 2.42
Sptlc1O35704 AC166822.3-201ENSMUST00000227394 661 ntBASIC30.14■■■□□ 2.42
Sptlc1O35704 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC30.12■■■□□ 2.41
Sptlc1O35704 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC30.1■■■□□ 2.41
Sptlc1O35704 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC30.09■■■□□ 2.41
Sptlc1O35704 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC30.05■■■□□ 2.4
Sptlc1O35704 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC30.02■■■□□ 2.4
Sptlc1O35704 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC30■■■□□ 2.39
Sptlc1O35704 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC30■■■□□ 2.39
Sptlc1O35704 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC30■■■□□ 2.39
Sptlc1O35704 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC29.98■■■□□ 2.39
Sptlc1O35704 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC29.96■■■□□ 2.39
Sptlc1O35704 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC29.96■■■□□ 2.39
Sptlc1O35704 Zfp131-207ENSMUST00000224946 1783 ntBASIC29.94■■■□□ 2.38
Sptlc1O35704 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC29.93■■■□□ 2.38
Sptlc1O35704 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC29.92■■■□□ 2.38
Sptlc1O35704 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC29.91■■■□□ 2.38
Sptlc1O35704 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC29.91■■■□□ 2.38
Sptlc1O35704 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC29.84■■■□□ 2.37
Sptlc1O35704 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC29.83■■■□□ 2.37
Sptlc1O35704 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC29.82■■■□□ 2.36
Sptlc1O35704 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC29.81■■■□□ 2.36
Sptlc1O35704 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC29.78■■■□□ 2.36
Sptlc1O35704 Zfp131-205ENSMUST00000223812 663 ntBASIC29.77■■■□□ 2.36
Sptlc1O35704 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC29.76■■■□□ 2.36
Sptlc1O35704 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC29.68■■■□□ 2.34
Sptlc1O35704 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC29.68■■■□□ 2.34
Sptlc1O35704 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC29.67■■■□□ 2.34
Sptlc1O35704 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC29.66■■■□□ 2.34
Sptlc1O35704 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC29.65■■■□□ 2.34
Sptlc1O35704 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC29.61■■■□□ 2.33
Sptlc1O35704 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC29.57■■■□□ 2.32
Sptlc1O35704 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC29.56■■■□□ 2.32
Sptlc1O35704 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC29.53■■■□□ 2.32
Sptlc1O35704 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC29.53■■■□□ 2.32
Sptlc1O35704 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC29.52■■■□□ 2.32
Sptlc1O35704 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC29.52■■■□□ 2.32
Sptlc1O35704 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC29.51■■■□□ 2.32
Sptlc1O35704 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC29.51■■■□□ 2.31
Sptlc1O35704 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC29.5■■■□□ 2.31
Sptlc1O35704 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC29.48■■■□□ 2.31
Sptlc1O35704 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC29.47■■■□□ 2.31
Sptlc1O35704 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC29.47■■■□□ 2.31
Sptlc1O35704 Peli2-204ENSMUST00000226513 1320 ntBASIC29.45■■■□□ 2.31
Sptlc1O35704 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC29.45■■■□□ 2.31
Sptlc1O35704 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC29.44■■■□□ 2.3
Sptlc1O35704 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC29.44■■■□□ 2.3
Sptlc1O35704 Mipep-204ENSMUST00000225043 1548 ntBASIC29.44■■■□□ 2.3
Sptlc1O35704 Gm16148-201ENSMUST00000119653 893 ntBASIC29.43■■■□□ 2.3
Sptlc1O35704 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC29.43■■■□□ 2.3
Sptlc1O35704 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC29.42■■■□□ 2.3
Sptlc1O35704 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC29.4■■■□□ 2.3
Sptlc1O35704 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC29.4■■■□□ 2.3
Sptlc1O35704 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC29.38■■■□□ 2.29
Sptlc1O35704 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC29.37■■■□□ 2.29
Sptlc1O35704 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC29.35■■■□□ 2.29
Sptlc1O35704 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC29.32■■■□□ 2.28
Sptlc1O35704 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC29.32■■■□□ 2.28
Retrieved 100 of 76,532 protein–RNA pairs in 51.9 ms