Protein–RNA interactions for Protein: O35595

Ptch2, Protein patched homolog 2, mousemouse

Predictions only

Length 1,182 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptch2O35595 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC28.91■■■□□ 2.22
Ptch2O35595 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC28.9■■■□□ 2.22
Ptch2O35595 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC28.89■■■□□ 2.21
Ptch2O35595 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC28.87■■■□□ 2.21
Ptch2O35595 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC28.86■■■□□ 2.21
Ptch2O35595 Gm17082-201ENSMUST00000166043 1091 ntBASIC28.84■■■□□ 2.21
Ptch2O35595 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC28.83■■■□□ 2.21
Ptch2O35595 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC28.81■■■□□ 2.2
Ptch2O35595 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC28.7■■■□□ 2.18
Ptch2O35595 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC28.68■■■□□ 2.18
Ptch2O35595 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC28.68■■■□□ 2.18
Ptch2O35595 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC28.62■■■□□ 2.17
Ptch2O35595 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC28.6■■■□□ 2.17
Ptch2O35595 Gm27322-201ENSMUST00000184007 104 ntBASIC28.57■■■□□ 2.16
Ptch2O35595 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC28.57■■■□□ 2.16
Ptch2O35595 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC28.55■■■□□ 2.16
Ptch2O35595 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC28.48■■■□□ 2.15
Ptch2O35595 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC28.48■■■□□ 2.15
Ptch2O35595 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC28.44■■■□□ 2.14
Ptch2O35595 Gm24804-201ENSMUST00000174982 85 ntBASIC28.4■■■□□ 2.14
Ptch2O35595 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC28.4■■■□□ 2.14
Ptch2O35595 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC28.39■■■□□ 2.14
Ptch2O35595 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
Ptch2O35595 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
Ptch2O35595 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
Ptch2O35595 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC28.3■■■□□ 2.12
Ptch2O35595 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.11
Ptch2O35595 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
Ptch2O35595 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
Ptch2O35595 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC28.21■■■□□ 2.11
Ptch2O35595 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC28.19■■■□□ 2.1
Ptch2O35595 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC28.15■■■□□ 2.1
Ptch2O35595 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
Ptch2O35595 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
Ptch2O35595 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.09
Ptch2O35595 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC28.12■■■□□ 2.09
Ptch2O35595 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
Ptch2O35595 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.09
Ptch2O35595 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC28.06■■■□□ 2.08
Ptch2O35595 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC28.04■■■□□ 2.08
Ptch2O35595 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC28.02■■■□□ 2.08
Ptch2O35595 AL845457.1-201ENSMUST00000197244 68 ntBASIC28.01■■■□□ 2.07
Ptch2O35595 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC28■■■□□ 2.07
Ptch2O35595 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC27.96■■■□□ 2.07
Ptch2O35595 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC27.96■■■□□ 2.07
Ptch2O35595 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC27.95■■■□□ 2.06
Ptch2O35595 AC166822.3-201ENSMUST00000227394 661 ntBASIC27.94■■■□□ 2.06
Ptch2O35595 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC27.94■■■□□ 2.06
Ptch2O35595 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC27.93■■■□□ 2.06
Ptch2O35595 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC27.91■■■□□ 2.06
Ptch2O35595 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC27.91■■■□□ 2.06
Ptch2O35595 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC27.89■■■□□ 2.06
Ptch2O35595 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC27.89■■■□□ 2.06
Ptch2O35595 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC27.88■■■□□ 2.05
Ptch2O35595 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC27.84■■■□□ 2.05
Ptch2O35595 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC27.82■■■□□ 2.04
Ptch2O35595 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC27.82■■■□□ 2.04
Ptch2O35595 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC27.81■■■□□ 2.04
Ptch2O35595 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC27.8■■■□□ 2.04
Ptch2O35595 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC27.78■■■□□ 2.04
Ptch2O35595 Zfp131-207ENSMUST00000224946 1783 ntBASIC27.78■■■□□ 2.04
Ptch2O35595 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC27.75■■■□□ 2.03
Ptch2O35595 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC27.74■■■□□ 2.03
Ptch2O35595 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC27.68■■■□□ 2.02
Ptch2O35595 Zfp131-205ENSMUST00000223812 663 ntBASIC27.67■■■□□ 2.02
Ptch2O35595 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC27.66■■■□□ 2.02
Ptch2O35595 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC27.63■■■□□ 2.01
Ptch2O35595 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC27.6■■■□□ 2.01
Ptch2O35595 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC27.56■■■□□ 2
Ptch2O35595 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC27.56■■■□□ 2
Ptch2O35595 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC27.56■■■□□ 2
Ptch2O35595 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC27.55■■■□□ 2
Ptch2O35595 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC27.54■■■□□ 2
Ptch2O35595 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC27.51■■■□□ 2
Ptch2O35595 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC27.49■■□□□ 1.99
Ptch2O35595 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC27.48■■□□□ 1.99
Ptch2O35595 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC27.45■■□□□ 1.98
Ptch2O35595 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC27.44■■□□□ 1.98
Ptch2O35595 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC27.42■■□□□ 1.98
Ptch2O35595 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC27.4■■□□□ 1.98
Ptch2O35595 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.98
Ptch2O35595 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC27.38■■□□□ 1.97
Ptch2O35595 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC27.38■■□□□ 1.97
Ptch2O35595 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC27.36■■□□□ 1.97
Ptch2O35595 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
Ptch2O35595 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC27.35■■□□□ 1.97
Ptch2O35595 Peli2-204ENSMUST00000226513 1320 ntBASIC27.34■■□□□ 1.97
Ptch2O35595 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC27.33■■□□□ 1.97
Ptch2O35595 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC27.33■■□□□ 1.97
Ptch2O35595 Mipep-204ENSMUST00000225043 1548 ntBASIC27.32■■□□□ 1.96
Ptch2O35595 Gm16148-201ENSMUST00000119653 893 ntBASIC27.31■■□□□ 1.96
Ptch2O35595 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC27.31■■□□□ 1.96
Ptch2O35595 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC27.3■■□□□ 1.96
Ptch2O35595 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
Ptch2O35595 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC27.27■■□□□ 1.96
Ptch2O35595 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC27.26■■□□□ 1.95
Ptch2O35595 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
Ptch2O35595 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC27.24■■□□□ 1.95
Ptch2O35595 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
Ptch2O35595 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC27.16■■□□□ 1.94
Retrieved 100 of 76,532 protein–RNA pairs in 12.7 ms