Protein–RNA interactions for Protein: L7N2C4

Gm4340, Predicted gene 4340, mousemouse

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm4340L7N2C4 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC34.12■■■■□ 3.05
Gm4340L7N2C4 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC34.09■■■■□ 3.05
Gm4340L7N2C4 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC34.07■■■■□ 3.05
Gm4340L7N2C4 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC34.06■■■■□ 3.04
Gm4340L7N2C4 Gm8109-201ENSMUST00000194076 746 ntBASIC34.06■■■■□ 3.04
Gm4340L7N2C4 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC33.98■■■■□ 3.03
Gm4340L7N2C4 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC33.97■■■■□ 3.03
Gm4340L7N2C4 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC33.95■■■■□ 3.03
Gm4340L7N2C4 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC33.91■■■■□ 3.02
Gm4340L7N2C4 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC33.91■■■■□ 3.02
Gm4340L7N2C4 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC33.89■■■■□ 3.02
Gm4340L7N2C4 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC33.8■■■■□ 3
Gm4340L7N2C4 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC33.79■■■■□ 3
Gm4340L7N2C4 Gm17082-201ENSMUST00000166043 1091 ntBASIC33.79■■■■□ 3
Gm4340L7N2C4 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC33.78■■■■□ 3
Gm4340L7N2C4 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC33.78■■■■□ 3
Gm4340L7N2C4 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC33.77■■■■□ 3
Gm4340L7N2C4 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC33.76■■■□□ 2.99
Gm4340L7N2C4 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC33.69■■■□□ 2.98
Gm4340L7N2C4 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC33.68■■■□□ 2.98
Gm4340L7N2C4 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC33.65■■■□□ 2.98
Gm4340L7N2C4 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC33.65■■■□□ 2.98
Gm4340L7N2C4 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC33.62■■■□□ 2.97
Gm4340L7N2C4 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC33.59■■■□□ 2.97
Gm4340L7N2C4 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC33.56■■■□□ 2.96
Gm4340L7N2C4 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC33.55■■■□□ 2.96
Gm4340L7N2C4 Gm27322-201ENSMUST00000184007 104 ntBASIC33.53■■■□□ 2.96
Gm4340L7N2C4 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC33.5■■■□□ 2.95
Gm4340L7N2C4 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC33.45■■■□□ 2.95
Gm4340L7N2C4 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC33.44■■■□□ 2.94
Gm4340L7N2C4 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC33.34■■■□□ 2.93
Gm4340L7N2C4 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC33.28■■■□□ 2.92
Gm4340L7N2C4 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC33.25■■■□□ 2.91
Gm4340L7N2C4 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC33.24■■■□□ 2.91
Gm4340L7N2C4 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC33.24■■■□□ 2.91
Gm4340L7N2C4 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC33.22■■■□□ 2.91
Gm4340L7N2C4 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC33.18■■■□□ 2.9
Gm4340L7N2C4 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC33.17■■■□□ 2.9
Gm4340L7N2C4 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC33.15■■■□□ 2.9
Gm4340L7N2C4 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC33.13■■■□□ 2.89
Gm4340L7N2C4 AL845457.1-201ENSMUST00000197244 68 ntBASIC33.12■■■□□ 2.89
Gm4340L7N2C4 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC33.12■■■□□ 2.89
Gm4340L7N2C4 Zfp131-207ENSMUST00000224946 1783 ntBASIC33.08■■■□□ 2.89
Gm4340L7N2C4 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC33.07■■■□□ 2.88
Gm4340L7N2C4 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC33.07■■■□□ 2.88
Gm4340L7N2C4 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC33.06■■■□□ 2.88
Gm4340L7N2C4 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC33.04■■■□□ 2.88
Gm4340L7N2C4 Gm24804-201ENSMUST00000174982 85 ntBASIC33.04■■■□□ 2.88
Gm4340L7N2C4 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC33.04■■■□□ 2.88
Gm4340L7N2C4 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC33.02■■■□□ 2.88
Gm4340L7N2C4 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC33.01■■■□□ 2.87
Gm4340L7N2C4 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC33.01■■■□□ 2.87
Gm4340L7N2C4 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC33.01■■■□□ 2.87
Gm4340L7N2C4 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC33■■■□□ 2.87
Gm4340L7N2C4 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC32.98■■■□□ 2.87
Gm4340L7N2C4 AC166822.3-201ENSMUST00000227394 661 ntBASIC32.96■■■□□ 2.87
Gm4340L7N2C4 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC32.96■■■□□ 2.87
Gm4340L7N2C4 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC32.89■■■□□ 2.86
Gm4340L7N2C4 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC32.83■■■□□ 2.85
Gm4340L7N2C4 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC32.8■■■□□ 2.84
Gm4340L7N2C4 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC32.77■■■□□ 2.84
Gm4340L7N2C4 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC32.77■■■□□ 2.84
Gm4340L7N2C4 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC32.75■■■□□ 2.83
Gm4340L7N2C4 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC32.72■■■□□ 2.83
Gm4340L7N2C4 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC32.7■■■□□ 2.83
Gm4340L7N2C4 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC32.66■■■□□ 2.82
Gm4340L7N2C4 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC32.6■■■□□ 2.81
Gm4340L7N2C4 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC32.59■■■□□ 2.81
Gm4340L7N2C4 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC32.58■■■□□ 2.81
Gm4340L7N2C4 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC32.56■■■□□ 2.8
Gm4340L7N2C4 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC32.55■■■□□ 2.8
Gm4340L7N2C4 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC32.52■■■□□ 2.8
Gm4340L7N2C4 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC32.51■■■□□ 2.79
Gm4340L7N2C4 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC32.5■■■□□ 2.79
Gm4340L7N2C4 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC32.5■■■□□ 2.79
Gm4340L7N2C4 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC32.49■■■□□ 2.79
Gm4340L7N2C4 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC32.48■■■□□ 2.79
Gm4340L7N2C4 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC32.45■■■□□ 2.79
Gm4340L7N2C4 Mipep-204ENSMUST00000225043 1548 ntBASIC32.45■■■□□ 2.78
Gm4340L7N2C4 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC32.41■■■□□ 2.78
Gm4340L7N2C4 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC32.4■■■□□ 2.78
Gm4340L7N2C4 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC32.4■■■□□ 2.78
Gm4340L7N2C4 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC32.38■■■□□ 2.77
Gm4340L7N2C4 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC32.37■■■□□ 2.77
Gm4340L7N2C4 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC32.36■■■□□ 2.77
Gm4340L7N2C4 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC32.35■■■□□ 2.77
Gm4340L7N2C4 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC32.35■■■□□ 2.77
Gm4340L7N2C4 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC32.28■■■□□ 2.76
Gm4340L7N2C4 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC32.28■■■□□ 2.76
Gm4340L7N2C4 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC32.28■■■□□ 2.76
Gm4340L7N2C4 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC32.27■■■□□ 2.76
Gm4340L7N2C4 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC32.23■■■□□ 2.75
Gm4340L7N2C4 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC32.23■■■□□ 2.75
Gm4340L7N2C4 Peli2-204ENSMUST00000226513 1320 ntBASIC32.23■■■□□ 2.75
Gm4340L7N2C4 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC32.21■■■□□ 2.75
Gm4340L7N2C4 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC32.21■■■□□ 2.75
Gm4340L7N2C4 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC32.19■■■□□ 2.74
Gm4340L7N2C4 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC32.19■■■□□ 2.74
Gm4340L7N2C4 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC32.18■■■□□ 2.74
Gm4340L7N2C4 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC32.17■■■□□ 2.74
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms