Protein–RNA interactions for Protein: J3QMN2

3110021N24Rik, RIKEN cDNA 3110021N24 gene, mousemouse

Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
3110021N24RikJ3QMN2 Gm26115-201ENSMUST00000175605 87 ntBASIC24.4■■□□□ 1.5
3110021N24RikJ3QMN2 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
3110021N24RikJ3QMN2 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
3110021N24RikJ3QMN2 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC24.38■■□□□ 1.49
3110021N24RikJ3QMN2 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC24.37■■□□□ 1.49
3110021N24RikJ3QMN2 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
3110021N24RikJ3QMN2 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
3110021N24RikJ3QMN2 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
3110021N24RikJ3QMN2 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
3110021N24RikJ3QMN2 Gm8109-201ENSMUST00000194076 746 ntBASIC24.31■■□□□ 1.48
3110021N24RikJ3QMN2 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
3110021N24RikJ3QMN2 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
3110021N24RikJ3QMN2 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC24.28■■□□□ 1.48
3110021N24RikJ3QMN2 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
3110021N24RikJ3QMN2 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC24.26■■□□□ 1.47
3110021N24RikJ3QMN2 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
3110021N24RikJ3QMN2 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
3110021N24RikJ3QMN2 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
3110021N24RikJ3QMN2 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.46
3110021N24RikJ3QMN2 Gm17082-201ENSMUST00000166043 1091 ntBASIC24.14■■□□□ 1.45
3110021N24RikJ3QMN2 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC24.13■■□□□ 1.45
3110021N24RikJ3QMN2 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC24.12■■□□□ 1.45
3110021N24RikJ3QMN2 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
3110021N24RikJ3QMN2 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
3110021N24RikJ3QMN2 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
3110021N24RikJ3QMN2 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC24■■□□□ 1.43
3110021N24RikJ3QMN2 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC23.99■■□□□ 1.43
3110021N24RikJ3QMN2 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC23.98■■□□□ 1.43
3110021N24RikJ3QMN2 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC23.98■■□□□ 1.43
3110021N24RikJ3QMN2 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.43
3110021N24RikJ3QMN2 Gm27322-201ENSMUST00000184007 104 ntBASIC23.95■■□□□ 1.42
3110021N24RikJ3QMN2 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC23.93■■□□□ 1.42
3110021N24RikJ3QMN2 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC23.91■■□□□ 1.42
3110021N24RikJ3QMN2 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
3110021N24RikJ3QMN2 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
3110021N24RikJ3QMN2 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC23.83■■□□□ 1.41
3110021N24RikJ3QMN2 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
3110021N24RikJ3QMN2 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC23.79■■□□□ 1.4
3110021N24RikJ3QMN2 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
3110021N24RikJ3QMN2 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC23.76■■□□□ 1.39
3110021N24RikJ3QMN2 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
3110021N24RikJ3QMN2 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
3110021N24RikJ3QMN2 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
3110021N24RikJ3QMN2 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
3110021N24RikJ3QMN2 Zfp131-207ENSMUST00000224946 1783 ntBASIC23.74■■□□□ 1.39
3110021N24RikJ3QMN2 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
3110021N24RikJ3QMN2 AL845457.1-201ENSMUST00000197244 68 ntBASIC23.72■■□□□ 1.39
3110021N24RikJ3QMN2 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
3110021N24RikJ3QMN2 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
3110021N24RikJ3QMN2 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC23.64■■□□□ 1.37
3110021N24RikJ3QMN2 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
3110021N24RikJ3QMN2 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
3110021N24RikJ3QMN2 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC23.63■■□□□ 1.37
3110021N24RikJ3QMN2 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC23.62■■□□□ 1.37
3110021N24RikJ3QMN2 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
3110021N24RikJ3QMN2 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
3110021N24RikJ3QMN2 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC23.59■■□□□ 1.37
3110021N24RikJ3QMN2 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC23.58■■□□□ 1.37
3110021N24RikJ3QMN2 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
3110021N24RikJ3QMN2 Gm24804-201ENSMUST00000174982 85 ntBASIC23.57■■□□□ 1.36
3110021N24RikJ3QMN2 AC166822.3-201ENSMUST00000227394 661 ntBASIC23.57■■□□□ 1.36
3110021N24RikJ3QMN2 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
3110021N24RikJ3QMN2 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC23.52■■□□□ 1.36
3110021N24RikJ3QMN2 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
3110021N24RikJ3QMN2 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC23.41■■□□□ 1.34
3110021N24RikJ3QMN2 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
3110021N24RikJ3QMN2 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
3110021N24RikJ3QMN2 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
3110021N24RikJ3QMN2 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC23.33■■□□□ 1.33
3110021N24RikJ3QMN2 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
3110021N24RikJ3QMN2 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
3110021N24RikJ3QMN2 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
3110021N24RikJ3QMN2 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
3110021N24RikJ3QMN2 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
3110021N24RikJ3QMN2 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
3110021N24RikJ3QMN2 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
3110021N24RikJ3QMN2 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC23.28■■□□□ 1.32
3110021N24RikJ3QMN2 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
3110021N24RikJ3QMN2 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
3110021N24RikJ3QMN2 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
3110021N24RikJ3QMN2 Mipep-204ENSMUST00000225043 1548 ntBASIC23.27■■□□□ 1.32
3110021N24RikJ3QMN2 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
3110021N24RikJ3QMN2 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC23.22■■□□□ 1.31
3110021N24RikJ3QMN2 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC23.22■■□□□ 1.31
3110021N24RikJ3QMN2 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
3110021N24RikJ3QMN2 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
3110021N24RikJ3QMN2 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
3110021N24RikJ3QMN2 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
3110021N24RikJ3QMN2 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
3110021N24RikJ3QMN2 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC23.17■■□□□ 1.3
3110021N24RikJ3QMN2 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC23.16■■□□□ 1.3
3110021N24RikJ3QMN2 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
3110021N24RikJ3QMN2 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
3110021N24RikJ3QMN2 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
3110021N24RikJ3QMN2 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
3110021N24RikJ3QMN2 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
3110021N24RikJ3QMN2 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
3110021N24RikJ3QMN2 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC23.07■■□□□ 1.28
3110021N24RikJ3QMN2 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
3110021N24RikJ3QMN2 Peli2-204ENSMUST00000226513 1320 ntBASIC23.04■■□□□ 1.28
Retrieved 100 of 76,532 protein–RNA pairs in 59 ms