Protein–RNA interactions for Protein: A0A140T8T4

Rpl9-ps6, Ribosomal protein L9, pseudogene 6, mousemouse

Predictions only

Length 192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl9-ps6A0A140T8T4 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC28.91■■■□□ 2.22
Rpl9-ps6A0A140T8T4 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC28.91■■■□□ 2.22
Rpl9-ps6A0A140T8T4 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC28.85■■■□□ 2.21
Rpl9-ps6A0A140T8T4 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC28.85■■■□□ 2.21
Rpl9-ps6A0A140T8T4 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC28.85■■■□□ 2.21
Rpl9-ps6A0A140T8T4 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC28.83■■■□□ 2.21
Rpl9-ps6A0A140T8T4 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC28.82■■■□□ 2.2
Rpl9-ps6A0A140T8T4 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC28.81■■■□□ 2.2
Rpl9-ps6A0A140T8T4 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC28.79■■■□□ 2.2
Rpl9-ps6A0A140T8T4 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC28.75■■■□□ 2.19
Rpl9-ps6A0A140T8T4 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC28.75■■■□□ 2.19
Rpl9-ps6A0A140T8T4 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC28.73■■■□□ 2.19
Rpl9-ps6A0A140T8T4 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC28.7■■■□□ 2.18
Rpl9-ps6A0A140T8T4 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC28.69■■■□□ 2.18
Rpl9-ps6A0A140T8T4 Gm26115-201ENSMUST00000175605 87 ntBASIC28.65■■■□□ 2.18
Rpl9-ps6A0A140T8T4 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC28.62■■■□□ 2.17
Rpl9-ps6A0A140T8T4 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC28.62■■■□□ 2.17
Rpl9-ps6A0A140T8T4 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC28.58■■■□□ 2.17
Rpl9-ps6A0A140T8T4 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC28.55■■■□□ 2.16
Rpl9-ps6A0A140T8T4 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC28.49■■■□□ 2.15
Rpl9-ps6A0A140T8T4 Gm8109-201ENSMUST00000194076 746 ntBASIC28.48■■■□□ 2.15
Rpl9-ps6A0A140T8T4 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC28.44■■■□□ 2.14
Rpl9-ps6A0A140T8T4 Gm17082-201ENSMUST00000166043 1091 ntBASIC28.42■■■□□ 2.14
Rpl9-ps6A0A140T8T4 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
Rpl9-ps6A0A140T8T4 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC28.4■■■□□ 2.14
Rpl9-ps6A0A140T8T4 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC28.39■■■□□ 2.13
Rpl9-ps6A0A140T8T4 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
Rpl9-ps6A0A140T8T4 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC28.38■■■□□ 2.13
Rpl9-ps6A0A140T8T4 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC28.38■■■□□ 2.13
Rpl9-ps6A0A140T8T4 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
Rpl9-ps6A0A140T8T4 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC28.3■■■□□ 2.12
Rpl9-ps6A0A140T8T4 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
Rpl9-ps6A0A140T8T4 Gm27322-201ENSMUST00000184007 104 ntBASIC28.28■■■□□ 2.12
Rpl9-ps6A0A140T8T4 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
Rpl9-ps6A0A140T8T4 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC28.27■■■□□ 2.12
Rpl9-ps6A0A140T8T4 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
Rpl9-ps6A0A140T8T4 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC28.27■■■□□ 2.12
Rpl9-ps6A0A140T8T4 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC28.26■■■□□ 2.11
Rpl9-ps6A0A140T8T4 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC28.24■■■□□ 2.11
Rpl9-ps6A0A140T8T4 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC28.23■■■□□ 2.11
Rpl9-ps6A0A140T8T4 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC28.22■■■□□ 2.11
Rpl9-ps6A0A140T8T4 Zfp131-207ENSMUST00000224946 1783 ntBASIC28.16■■■□□ 2.1
Rpl9-ps6A0A140T8T4 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC28.14■■■□□ 2.1
Rpl9-ps6A0A140T8T4 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC28.11■■■□□ 2.09
Rpl9-ps6A0A140T8T4 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC28.09■■■□□ 2.09
Rpl9-ps6A0A140T8T4 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC28.07■■■□□ 2.08
Rpl9-ps6A0A140T8T4 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC28.07■■■□□ 2.08
Rpl9-ps6A0A140T8T4 AL845457.1-201ENSMUST00000197244 68 ntBASIC28.06■■■□□ 2.08
Rpl9-ps6A0A140T8T4 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC28.05■■■□□ 2.08
Rpl9-ps6A0A140T8T4 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC28.02■■■□□ 2.08
Rpl9-ps6A0A140T8T4 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC27.99■■■□□ 2.07
Rpl9-ps6A0A140T8T4 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC27.95■■■□□ 2.07
Rpl9-ps6A0A140T8T4 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC27.93■■■□□ 2.06
Rpl9-ps6A0A140T8T4 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC27.93■■■□□ 2.06
Rpl9-ps6A0A140T8T4 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC27.89■■■□□ 2.06
Rpl9-ps6A0A140T8T4 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC27.89■■■□□ 2.05
Rpl9-ps6A0A140T8T4 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC27.89■■■□□ 2.05
Rpl9-ps6A0A140T8T4 AC166822.3-201ENSMUST00000227394 661 ntBASIC27.88■■■□□ 2.05
Rpl9-ps6A0A140T8T4 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC27.88■■■□□ 2.05
Rpl9-ps6A0A140T8T4 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC27.87■■■□□ 2.05
Rpl9-ps6A0A140T8T4 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC27.81■■■□□ 2.04
Rpl9-ps6A0A140T8T4 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC27.78■■■□□ 2.04
Rpl9-ps6A0A140T8T4 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC27.78■■■□□ 2.04
Rpl9-ps6A0A140T8T4 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC27.73■■■□□ 2.03
Rpl9-ps6A0A140T8T4 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC27.7■■■□□ 2.02
Rpl9-ps6A0A140T8T4 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC27.69■■■□□ 2.02
Rpl9-ps6A0A140T8T4 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC27.68■■■□□ 2.02
Rpl9-ps6A0A140T8T4 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC27.67■■■□□ 2.02
Rpl9-ps6A0A140T8T4 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC27.66■■■□□ 2.02
Rpl9-ps6A0A140T8T4 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC27.65■■■□□ 2.02
Rpl9-ps6A0A140T8T4 Gm24804-201ENSMUST00000174982 85 ntBASIC27.64■■■□□ 2.02
Rpl9-ps6A0A140T8T4 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC27.63■■■□□ 2.01
Rpl9-ps6A0A140T8T4 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC27.6■■■□□ 2.01
Rpl9-ps6A0A140T8T4 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC27.6■■■□□ 2.01
Rpl9-ps6A0A140T8T4 Mipep-204ENSMUST00000225043 1548 ntBASIC27.6■■■□□ 2.01
Rpl9-ps6A0A140T8T4 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC27.57■■■□□ 2
Rpl9-ps6A0A140T8T4 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC27.55■■■□□ 2
Rpl9-ps6A0A140T8T4 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC27.54■■■□□ 2
Rpl9-ps6A0A140T8T4 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC27.53■■■□□ 2
Rpl9-ps6A0A140T8T4 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC27.52■■■□□ 2
Rpl9-ps6A0A140T8T4 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC27.52■■■□□ 2
Rpl9-ps6A0A140T8T4 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC27.51■■□□□ 1.99
Rpl9-ps6A0A140T8T4 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC27.5■■□□□ 1.99
Rpl9-ps6A0A140T8T4 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC27.48■■□□□ 1.99
Rpl9-ps6A0A140T8T4 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC27.46■■□□□ 1.99
Rpl9-ps6A0A140T8T4 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC27.46■■□□□ 1.99
Rpl9-ps6A0A140T8T4 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC27.45■■□□□ 1.99
Rpl9-ps6A0A140T8T4 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC27.45■■□□□ 1.98
Rpl9-ps6A0A140T8T4 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC27.43■■□□□ 1.98
Rpl9-ps6A0A140T8T4 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC27.43■■□□□ 1.98
Rpl9-ps6A0A140T8T4 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.98
Rpl9-ps6A0A140T8T4 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
Rpl9-ps6A0A140T8T4 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC27.37■■□□□ 1.97
Rpl9-ps6A0A140T8T4 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC27.34■■□□□ 1.97
Rpl9-ps6A0A140T8T4 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC27.34■■□□□ 1.97
Rpl9-ps6A0A140T8T4 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC27.33■■□□□ 1.97
Rpl9-ps6A0A140T8T4 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC27.33■■□□□ 1.97
Rpl9-ps6A0A140T8T4 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC27.33■■□□□ 1.97
Rpl9-ps6A0A140T8T4 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
Rpl9-ps6A0A140T8T4 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC27.29■■□□□ 1.96
Retrieved 100 of 76,532 protein–RNA pairs in 14.9 ms