Protein–RNA interactions for Protein: A0A0R3P9D1

Gm42688, Predicted gene 42688, mousemouse

Predictions only

Length 673 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm42688A0A0R3P9D1 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC33.08■■■□□ 2.89
Gm42688A0A0R3P9D1 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC33.04■■■□□ 2.88
Gm42688A0A0R3P9D1 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC33.01■■■□□ 2.87
Gm42688A0A0R3P9D1 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC32.97■■■□□ 2.87
Gm42688A0A0R3P9D1 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC32.95■■■□□ 2.87
Gm42688A0A0R3P9D1 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC32.95■■■□□ 2.87
Gm42688A0A0R3P9D1 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC32.93■■■□□ 2.86
Gm42688A0A0R3P9D1 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC32.93■■■□□ 2.86
Gm42688A0A0R3P9D1 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC32.91■■■□□ 2.86
Gm42688A0A0R3P9D1 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC32.83■■■□□ 2.85
Gm42688A0A0R3P9D1 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC32.79■■■□□ 2.84
Gm42688A0A0R3P9D1 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC32.67■■■□□ 2.82
Gm42688A0A0R3P9D1 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC32.67■■■□□ 2.82
Gm42688A0A0R3P9D1 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC32.66■■■□□ 2.82
Gm42688A0A0R3P9D1 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC32.65■■■□□ 2.82
Gm42688A0A0R3P9D1 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC32.62■■■□□ 2.81
Gm42688A0A0R3P9D1 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC32.59■■■□□ 2.81
Gm42688A0A0R3P9D1 Psd-208ENSMUST00000224556 2034 ntBASIC32.59■■■□□ 2.81
Gm42688A0A0R3P9D1 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC32.57■■■□□ 2.8
Gm42688A0A0R3P9D1 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC32.57■■■□□ 2.8
Gm42688A0A0R3P9D1 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC32.55■■■□□ 2.8
Gm42688A0A0R3P9D1 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC32.49■■■□□ 2.79
Gm42688A0A0R3P9D1 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC32.48■■■□□ 2.79
Gm42688A0A0R3P9D1 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC32.46■■■□□ 2.79
Gm42688A0A0R3P9D1 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC32.41■■■□□ 2.78
Gm42688A0A0R3P9D1 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC32.41■■■□□ 2.78
Gm42688A0A0R3P9D1 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC32.39■■■□□ 2.78
Gm42688A0A0R3P9D1 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC32.35■■■□□ 2.77
Gm42688A0A0R3P9D1 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC32.3■■■□□ 2.76
Gm42688A0A0R3P9D1 AC166822.3-201ENSMUST00000227394 661 ntBASIC32.3■■■□□ 2.76
Gm42688A0A0R3P9D1 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC32.28■■■□□ 2.76
Gm42688A0A0R3P9D1 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC32.23■■■□□ 2.75
Gm42688A0A0R3P9D1 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC32.22■■■□□ 2.75
Gm42688A0A0R3P9D1 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC32.22■■■□□ 2.75
Gm42688A0A0R3P9D1 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC32.2■■■□□ 2.75
Gm42688A0A0R3P9D1 Tdp2-203ENSMUST00000223804 1136 ntBASIC32.19■■■□□ 2.74
Gm42688A0A0R3P9D1 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC32.18■■■□□ 2.74
Gm42688A0A0R3P9D1 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC32.16■■■□□ 2.74
Gm42688A0A0R3P9D1 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC32.13■■■□□ 2.73
Gm42688A0A0R3P9D1 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC32.12■■■□□ 2.73
Gm42688A0A0R3P9D1 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC32.09■■■□□ 2.73
Gm42688A0A0R3P9D1 Gm16148-201ENSMUST00000119653 893 ntBASIC32.08■■■□□ 2.73
Gm42688A0A0R3P9D1 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC32.06■■■□□ 2.72
Gm42688A0A0R3P9D1 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC32.05■■■□□ 2.72
Gm42688A0A0R3P9D1 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC32.04■■■□□ 2.72
Gm42688A0A0R3P9D1 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC31.98■■■□□ 2.71
Gm42688A0A0R3P9D1 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC31.98■■■□□ 2.71
Gm42688A0A0R3P9D1 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC31.95■■■□□ 2.71
Gm42688A0A0R3P9D1 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC31.93■■■□□ 2.7
Gm42688A0A0R3P9D1 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC31.93■■■□□ 2.7
Gm42688A0A0R3P9D1 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC31.92■■■□□ 2.7
Gm42688A0A0R3P9D1 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC31.92■■■□□ 2.7
Gm42688A0A0R3P9D1 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC31.92■■■□□ 2.7
Gm42688A0A0R3P9D1 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC31.9■■■□□ 2.7
Gm42688A0A0R3P9D1 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC31.9■■■□□ 2.7
Gm42688A0A0R3P9D1 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC31.89■■■□□ 2.7
Gm42688A0A0R3P9D1 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC31.88■■■□□ 2.69
Gm42688A0A0R3P9D1 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC31.83■■■□□ 2.69
Gm42688A0A0R3P9D1 AL845457.1-201ENSMUST00000197244 68 ntBASIC31.83■■■□□ 2.69
Gm42688A0A0R3P9D1 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC31.82■■■□□ 2.68
Gm42688A0A0R3P9D1 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC31.81■■■□□ 2.68
Gm42688A0A0R3P9D1 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC31.78■■■□□ 2.68
Gm42688A0A0R3P9D1 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC31.75■■■□□ 2.67
Gm42688A0A0R3P9D1 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC31.73■■■□□ 2.67
Gm42688A0A0R3P9D1 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC31.73■■■□□ 2.67
Gm42688A0A0R3P9D1 Gm5987-201ENSMUST00000196433 1151 ntBASIC31.71■■■□□ 2.67
Gm42688A0A0R3P9D1 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC31.7■■■□□ 2.67
Gm42688A0A0R3P9D1 Gm45855-201ENSMUST00000212546 880 ntBASIC31.7■■■□□ 2.67
Gm42688A0A0R3P9D1 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC31.7■■■□□ 2.67
Gm42688A0A0R3P9D1 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC31.67■■■□□ 2.66
Gm42688A0A0R3P9D1 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC31.67■■■□□ 2.66
Gm42688A0A0R3P9D1 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC31.61■■■□□ 2.65
Gm42688A0A0R3P9D1 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC31.6■■■□□ 2.65
Gm42688A0A0R3P9D1 Gm42596-201ENSMUST00000196305 1958 ntBASIC31.59■■■□□ 2.65
Gm42688A0A0R3P9D1 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC31.59■■■□□ 2.65
Gm42688A0A0R3P9D1 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC31.57■■■□□ 2.64
Gm42688A0A0R3P9D1 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC31.57■■■□□ 2.64
Gm42688A0A0R3P9D1 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC31.56■■■□□ 2.64
Gm42688A0A0R3P9D1 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC31.53■■■□□ 2.64
Gm42688A0A0R3P9D1 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC31.53■■■□□ 2.64
Gm42688A0A0R3P9D1 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC31.51■■■□□ 2.63
Gm42688A0A0R3P9D1 CT025624.2-201ENSMUST00000223609 1909 ntBASIC31.51■■■□□ 2.63
Gm42688A0A0R3P9D1 Peli2-204ENSMUST00000226513 1320 ntBASIC31.5■■■□□ 2.63
Gm42688A0A0R3P9D1 Gm10524-201ENSMUST00000181931 1893 ntBASIC31.49■■■□□ 2.63
Gm42688A0A0R3P9D1 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC31.49■■■□□ 2.63
Gm42688A0A0R3P9D1 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
Gm42688A0A0R3P9D1 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC31.48■■■□□ 2.63
Gm42688A0A0R3P9D1 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC31.47■■■□□ 2.63
Gm42688A0A0R3P9D1 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC31.45■■■□□ 2.63
Gm42688A0A0R3P9D1 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC31.45■■■□□ 2.63
Gm42688A0A0R3P9D1 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC31.44■■■□□ 2.62
Gm42688A0A0R3P9D1 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC31.43■■■□□ 2.62
Gm42688A0A0R3P9D1 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC31.39■■■□□ 2.62
Gm42688A0A0R3P9D1 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC31.37■■■□□ 2.61
Gm42688A0A0R3P9D1 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC31.36■■■□□ 2.61
Gm42688A0A0R3P9D1 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC31.35■■■□□ 2.61
Gm42688A0A0R3P9D1 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC31.34■■■□□ 2.61
Gm42688A0A0R3P9D1 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC31.33■■■□□ 2.61
Gm42688A0A0R3P9D1 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC31.33■■■□□ 2.61
Gm42688A0A0R3P9D1 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC31.31■■■□□ 2.6
Retrieved 100 of 76,532 protein–RNA pairs in 14.3 ms