Protein–RNA interactions for Protein: A0A0B4J1J1

Igkv5-45, Immunoglobulin kappa chain variable 5-45 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv5-45A0A0B4J1J1 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC29.18■■■□□ 2.26
Igkv5-45A0A0B4J1J1 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC29.17■■■□□ 2.26
Igkv5-45A0A0B4J1J1 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC29.14■■■□□ 2.25
Igkv5-45A0A0B4J1J1 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC29.14■■■□□ 2.25
Igkv5-45A0A0B4J1J1 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC29.12■■■□□ 2.25
Igkv5-45A0A0B4J1J1 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC29.09■■■□□ 2.25
Igkv5-45A0A0B4J1J1 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC29.09■■■□□ 2.25
Igkv5-45A0A0B4J1J1 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC29.07■■■□□ 2.24
Igkv5-45A0A0B4J1J1 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC29.02■■■□□ 2.24
Igkv5-45A0A0B4J1J1 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC29.02■■■□□ 2.24
Igkv5-45A0A0B4J1J1 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC29.01■■■□□ 2.24
Igkv5-45A0A0B4J1J1 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC29.01■■■□□ 2.23
Igkv5-45A0A0B4J1J1 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC29.01■■■□□ 2.23
Igkv5-45A0A0B4J1J1 Gm26115-201ENSMUST00000175605 87 ntBASIC28.98■■■□□ 2.23
Igkv5-45A0A0B4J1J1 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC28.92■■■□□ 2.22
Igkv5-45A0A0B4J1J1 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC28.9■■■□□ 2.22
Igkv5-45A0A0B4J1J1 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC28.89■■■□□ 2.22
Igkv5-45A0A0B4J1J1 Gm8109-201ENSMUST00000194076 746 ntBASIC28.88■■■□□ 2.21
Igkv5-45A0A0B4J1J1 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC28.88■■■□□ 2.21
Igkv5-45A0A0B4J1J1 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC28.86■■■□□ 2.21
Igkv5-45A0A0B4J1J1 Gm17082-201ENSMUST00000166043 1091 ntBASIC28.77■■■□□ 2.2
Igkv5-45A0A0B4J1J1 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC28.76■■■□□ 2.2
Igkv5-45A0A0B4J1J1 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC28.75■■■□□ 2.19
Igkv5-45A0A0B4J1J1 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC28.74■■■□□ 2.19
Igkv5-45A0A0B4J1J1 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC28.71■■■□□ 2.19
Igkv5-45A0A0B4J1J1 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC28.67■■■□□ 2.18
Igkv5-45A0A0B4J1J1 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC28.67■■■□□ 2.18
Igkv5-45A0A0B4J1J1 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC28.67■■■□□ 2.18
Igkv5-45A0A0B4J1J1 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC28.65■■■□□ 2.18
Igkv5-45A0A0B4J1J1 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC28.63■■■□□ 2.17
Igkv5-45A0A0B4J1J1 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC28.57■■■□□ 2.16
Igkv5-45A0A0B4J1J1 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC28.55■■■□□ 2.16
Igkv5-45A0A0B4J1J1 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC28.55■■■□□ 2.16
Igkv5-45A0A0B4J1J1 Gm27322-201ENSMUST00000184007 104 ntBASIC28.52■■■□□ 2.16
Igkv5-45A0A0B4J1J1 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC28.52■■■□□ 2.16
Igkv5-45A0A0B4J1J1 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC28.51■■■□□ 2.15
Igkv5-45A0A0B4J1J1 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC28.5■■■□□ 2.15
Igkv5-45A0A0B4J1J1 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC28.48■■■□□ 2.15
Igkv5-45A0A0B4J1J1 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC28.48■■■□□ 2.15
Igkv5-45A0A0B4J1J1 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC28.43■■■□□ 2.14
Igkv5-45A0A0B4J1J1 Zfp131-207ENSMUST00000224946 1783 ntBASIC28.42■■■□□ 2.14
Igkv5-45A0A0B4J1J1 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC28.4■■■□□ 2.14
Igkv5-45A0A0B4J1J1 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
Igkv5-45A0A0B4J1J1 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC28.37■■■□□ 2.13
Igkv5-45A0A0B4J1J1 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
Igkv5-45A0A0B4J1J1 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC28.36■■■□□ 2.13
Igkv5-45A0A0B4J1J1 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC28.35■■■□□ 2.13
Igkv5-45A0A0B4J1J1 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.12
Igkv5-45A0A0B4J1J1 AL845457.1-201ENSMUST00000197244 68 ntBASIC28.32■■■□□ 2.12
Igkv5-45A0A0B4J1J1 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC28.31■■■□□ 2.12
Igkv5-45A0A0B4J1J1 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
Igkv5-45A0A0B4J1J1 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC28.27■■■□□ 2.12
Igkv5-45A0A0B4J1J1 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
Igkv5-45A0A0B4J1J1 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC28.2■■■□□ 2.1
Igkv5-45A0A0B4J1J1 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
Igkv5-45A0A0B4J1J1 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC28.16■■■□□ 2.1
Igkv5-45A0A0B4J1J1 AC166822.3-201ENSMUST00000227394 661 ntBASIC28.14■■■□□ 2.1
Igkv5-45A0A0B4J1J1 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC28.12■■■□□ 2.09
Igkv5-45A0A0B4J1J1 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
Igkv5-45A0A0B4J1J1 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC28.09■■■□□ 2.09
Igkv5-45A0A0B4J1J1 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC28.06■■■□□ 2.08
Igkv5-45A0A0B4J1J1 Gm24804-201ENSMUST00000174982 85 ntBASIC28.04■■■□□ 2.08
Igkv5-45A0A0B4J1J1 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC28.01■■■□□ 2.07
Igkv5-45A0A0B4J1J1 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC28.01■■■□□ 2.07
Igkv5-45A0A0B4J1J1 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC27.99■■■□□ 2.07
Igkv5-45A0A0B4J1J1 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC27.95■■■□□ 2.07
Igkv5-45A0A0B4J1J1 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC27.95■■■□□ 2.07
Igkv5-45A0A0B4J1J1 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC27.95■■■□□ 2.06
Igkv5-45A0A0B4J1J1 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC27.94■■■□□ 2.06
Igkv5-45A0A0B4J1J1 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC27.93■■■□□ 2.06
Igkv5-45A0A0B4J1J1 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC27.93■■■□□ 2.06
Igkv5-45A0A0B4J1J1 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC27.93■■■□□ 2.06
Igkv5-45A0A0B4J1J1 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC27.92■■■□□ 2.06
Igkv5-45A0A0B4J1J1 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC27.92■■■□□ 2.06
Igkv5-45A0A0B4J1J1 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC27.87■■■□□ 2.05
Igkv5-45A0A0B4J1J1 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC27.85■■■□□ 2.05
Igkv5-45A0A0B4J1J1 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC27.84■■■□□ 2.05
Igkv5-45A0A0B4J1J1 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC27.83■■■□□ 2.05
Igkv5-45A0A0B4J1J1 Mipep-204ENSMUST00000225043 1548 ntBASIC27.81■■■□□ 2.04
Igkv5-45A0A0B4J1J1 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC27.79■■■□□ 2.04
Igkv5-45A0A0B4J1J1 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC27.75■■■□□ 2.03
Igkv5-45A0A0B4J1J1 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC27.74■■■□□ 2.03
Igkv5-45A0A0B4J1J1 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC27.73■■■□□ 2.03
Igkv5-45A0A0B4J1J1 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC27.7■■■□□ 2.02
Igkv5-45A0A0B4J1J1 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC27.69■■■□□ 2.02
Igkv5-45A0A0B4J1J1 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC27.69■■■□□ 2.02
Igkv5-45A0A0B4J1J1 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC27.69■■■□□ 2.02
Igkv5-45A0A0B4J1J1 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC27.68■■■□□ 2.02
Igkv5-45A0A0B4J1J1 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC27.67■■■□□ 2.02
Igkv5-45A0A0B4J1J1 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC27.66■■■□□ 2.02
Igkv5-45A0A0B4J1J1 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC27.66■■■□□ 2.02
Igkv5-45A0A0B4J1J1 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC27.64■■■□□ 2.02
Igkv5-45A0A0B4J1J1 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC27.63■■■□□ 2.01
Igkv5-45A0A0B4J1J1 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC27.59■■■□□ 2.01
Igkv5-45A0A0B4J1J1 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC27.58■■■□□ 2.01
Igkv5-45A0A0B4J1J1 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC27.57■■■□□ 2
Igkv5-45A0A0B4J1J1 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC27.57■■■□□ 2
Igkv5-45A0A0B4J1J1 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC27.57■■■□□ 2
Igkv5-45A0A0B4J1J1 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC27.57■■■□□ 2
Igkv5-45A0A0B4J1J1 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC27.57■■■□□ 2
Retrieved 100 of 76,532 protein–RNA pairs in 14.1 ms