Protein–RNA interactions for Protein: A0A087WSH0

1700031M16Rik, RIKEN cDNA 1700031M16 gene, mousemouse

Predictions only

Length 82 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
1700031M16RikA0A087WSH0 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC29.57■■■□□ 2.32
1700031M16RikA0A087WSH0 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC29.54■■■□□ 2.32
1700031M16RikA0A087WSH0 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC29.53■■■□□ 2.32
1700031M16RikA0A087WSH0 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC29.52■■■□□ 2.32
1700031M16RikA0A087WSH0 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC29.49■■■□□ 2.31
1700031M16RikA0A087WSH0 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC29.48■■■□□ 2.31
1700031M16RikA0A087WSH0 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC29.48■■■□□ 2.31
1700031M16RikA0A087WSH0 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC29.48■■■□□ 2.31
1700031M16RikA0A087WSH0 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC29.47■■■□□ 2.31
1700031M16RikA0A087WSH0 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC29.46■■■□□ 2.31
1700031M16RikA0A087WSH0 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC29.45■■■□□ 2.3
1700031M16RikA0A087WSH0 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC29.44■■■□□ 2.3
1700031M16RikA0A087WSH0 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC29.43■■■□□ 2.3
1700031M16RikA0A087WSH0 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC29.4■■■□□ 2.3
1700031M16RikA0A087WSH0 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC29.38■■■□□ 2.29
1700031M16RikA0A087WSH0 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC29.35■■■□□ 2.29
1700031M16RikA0A087WSH0 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC29.34■■■□□ 2.29
1700031M16RikA0A087WSH0 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC29.24■■■□□ 2.27
1700031M16RikA0A087WSH0 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC29.22■■■□□ 2.27
1700031M16RikA0A087WSH0 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC29.19■■■□□ 2.26
1700031M16RikA0A087WSH0 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC29.16■■■□□ 2.26
1700031M16RikA0A087WSH0 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC29.15■■■□□ 2.26
1700031M16RikA0A087WSH0 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC29.15■■■□□ 2.26
1700031M16RikA0A087WSH0 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC29.11■■■□□ 2.25
1700031M16RikA0A087WSH0 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC29.1■■■□□ 2.25
1700031M16RikA0A087WSH0 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC29.08■■■□□ 2.25
1700031M16RikA0A087WSH0 Gm26115-201ENSMUST00000175605 87 ntBASIC29.08■■■□□ 2.25
1700031M16RikA0A087WSH0 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC29.08■■■□□ 2.25
1700031M16RikA0A087WSH0 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC29.04■■■□□ 2.24
1700031M16RikA0A087WSH0 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC29.04■■■□□ 2.24
1700031M16RikA0A087WSH0 Gm8109-201ENSMUST00000194076 746 ntBASIC29.03■■■□□ 2.24
1700031M16RikA0A087WSH0 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC29.01■■■□□ 2.23
1700031M16RikA0A087WSH0 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC28.97■■■□□ 2.23
1700031M16RikA0A087WSH0 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC28.95■■■□□ 2.23
1700031M16RikA0A087WSH0 Gm17082-201ENSMUST00000166043 1091 ntBASIC28.94■■■□□ 2.22
1700031M16RikA0A087WSH0 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC28.92■■■□□ 2.22
1700031M16RikA0A087WSH0 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC28.9■■■□□ 2.22
1700031M16RikA0A087WSH0 Zfp131-207ENSMUST00000224946 1783 ntBASIC28.86■■■□□ 2.21
1700031M16RikA0A087WSH0 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC28.85■■■□□ 2.21
1700031M16RikA0A087WSH0 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC28.84■■■□□ 2.21
1700031M16RikA0A087WSH0 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC28.83■■■□□ 2.21
1700031M16RikA0A087WSH0 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC28.81■■■□□ 2.2
1700031M16RikA0A087WSH0 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC28.8■■■□□ 2.2
1700031M16RikA0A087WSH0 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC28.78■■■□□ 2.2
1700031M16RikA0A087WSH0 Gm27322-201ENSMUST00000184007 104 ntBASIC28.77■■■□□ 2.2
1700031M16RikA0A087WSH0 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC28.75■■■□□ 2.19
1700031M16RikA0A087WSH0 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC28.73■■■□□ 2.19
1700031M16RikA0A087WSH0 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC28.73■■■□□ 2.19
1700031M16RikA0A087WSH0 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC28.72■■■□□ 2.19
1700031M16RikA0A087WSH0 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC28.7■■■□□ 2.18
1700031M16RikA0A087WSH0 AL845457.1-201ENSMUST00000197244 68 ntBASIC28.69■■■□□ 2.18
1700031M16RikA0A087WSH0 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC28.67■■■□□ 2.18
1700031M16RikA0A087WSH0 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC28.65■■■□□ 2.18
1700031M16RikA0A087WSH0 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC28.64■■■□□ 2.17
1700031M16RikA0A087WSH0 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC28.63■■■□□ 2.17
1700031M16RikA0A087WSH0 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC28.6■■■□□ 2.17
1700031M16RikA0A087WSH0 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC28.6■■■□□ 2.17
1700031M16RikA0A087WSH0 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC28.56■■■□□ 2.16
1700031M16RikA0A087WSH0 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC28.54■■■□□ 2.16
1700031M16RikA0A087WSH0 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC28.54■■■□□ 2.16
1700031M16RikA0A087WSH0 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC28.53■■■□□ 2.16
1700031M16RikA0A087WSH0 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC28.53■■■□□ 2.16
1700031M16RikA0A087WSH0 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC28.5■■■□□ 2.15
1700031M16RikA0A087WSH0 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC28.5■■■□□ 2.15
1700031M16RikA0A087WSH0 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC28.44■■■□□ 2.14
1700031M16RikA0A087WSH0 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
1700031M16RikA0A087WSH0 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC28.41■■■□□ 2.14
1700031M16RikA0A087WSH0 AC166822.3-201ENSMUST00000227394 661 ntBASIC28.39■■■□□ 2.14
1700031M16RikA0A087WSH0 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC28.37■■■□□ 2.13
1700031M16RikA0A087WSH0 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC28.35■■■□□ 2.13
1700031M16RikA0A087WSH0 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC28.32■■■□□ 2.12
1700031M16RikA0A087WSH0 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC28.31■■■□□ 2.12
1700031M16RikA0A087WSH0 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
1700031M16RikA0A087WSH0 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC28.27■■■□□ 2.12
1700031M16RikA0A087WSH0 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
1700031M16RikA0A087WSH0 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
1700031M16RikA0A087WSH0 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
1700031M16RikA0A087WSH0 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
1700031M16RikA0A087WSH0 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC28.24■■■□□ 2.11
1700031M16RikA0A087WSH0 Mipep-204ENSMUST00000225043 1548 ntBASIC28.23■■■□□ 2.11
1700031M16RikA0A087WSH0 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC28.23■■■□□ 2.11
1700031M16RikA0A087WSH0 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC28.19■■■□□ 2.1
1700031M16RikA0A087WSH0 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
1700031M16RikA0A087WSH0 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.1
1700031M16RikA0A087WSH0 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
1700031M16RikA0A087WSH0 Gm24804-201ENSMUST00000174982 85 ntBASIC28.13■■■□□ 2.09
1700031M16RikA0A087WSH0 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC28.12■■■□□ 2.09
1700031M16RikA0A087WSH0 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC28.09■■■□□ 2.09
1700031M16RikA0A087WSH0 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC28.09■■■□□ 2.09
1700031M16RikA0A087WSH0 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC28.07■■■□□ 2.08
1700031M16RikA0A087WSH0 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC28.05■■■□□ 2.08
1700031M16RikA0A087WSH0 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC28.04■■■□□ 2.08
1700031M16RikA0A087WSH0 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC28.04■■■□□ 2.08
1700031M16RikA0A087WSH0 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC28■■■□□ 2.07
1700031M16RikA0A087WSH0 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC27.99■■■□□ 2.07
1700031M16RikA0A087WSH0 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC27.97■■■□□ 2.07
1700031M16RikA0A087WSH0 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC27.95■■■□□ 2.06
1700031M16RikA0A087WSH0 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC27.94■■■□□ 2.06
1700031M16RikA0A087WSH0 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC27.92■■■□□ 2.06
1700031M16RikA0A087WSH0 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC27.9■■■□□ 2.06
Retrieved 100 of 76,532 protein–RNA pairs in 41.4 ms