Protein–RNA interactions for Protein: A0A075B638

Trav4-2, T cell receptor alpha variable 4-2 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4-2A0A075B638 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC21.8■■□□□ 1.08
Trav4-2A0A075B638 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Trav4-2A0A075B638 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
Trav4-2A0A075B638 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Trav4-2A0A075B638 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Trav4-2A0A075B638 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC21.72■■□□□ 1.07
Trav4-2A0A075B638 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
Trav4-2A0A075B638 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Trav4-2A0A075B638 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Trav4-2A0A075B638 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Trav4-2A0A075B638 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Trav4-2A0A075B638 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Trav4-2A0A075B638 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Trav4-2A0A075B638 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Trav4-2A0A075B638 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC21.53■■□□□ 1.04
Trav4-2A0A075B638 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC21.52■■□□□ 1.04
Trav4-2A0A075B638 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC21.52■■□□□ 1.04
Trav4-2A0A075B638 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Trav4-2A0A075B638 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC21.51■■□□□ 1.03
Trav4-2A0A075B638 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
Trav4-2A0A075B638 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC21.47■■□□□ 1.03
Trav4-2A0A075B638 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Trav4-2A0A075B638 AC153504.1-201ENSMUST00000218379 2290 ntBASIC21.46■■□□□ 1.03
Trav4-2A0A075B638 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.03
Trav4-2A0A075B638 Gm2415-204ENSMUST00000190235 2004 ntBASIC21.42■■□□□ 1.02
Trav4-2A0A075B638 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Trav4-2A0A075B638 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC21.4■■□□□ 1.02
Trav4-2A0A075B638 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC21.37■■□□□ 1.01
Trav4-2A0A075B638 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Trav4-2A0A075B638 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Trav4-2A0A075B638 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
Trav4-2A0A075B638 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
Trav4-2A0A075B638 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC21.27■■□□□ 1
Trav4-2A0A075B638 Gm6658-202ENSMUST00000209493 1885 ntBASIC21.24■□□□□ 0.99
Trav4-2A0A075B638 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Trav4-2A0A075B638 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Trav4-2A0A075B638 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Trav4-2A0A075B638 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Trav4-2A0A075B638 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Trav4-2A0A075B638 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Trav4-2A0A075B638 Gm27325-201ENSMUST00000175467 74 ntBASIC21.18■□□□□ 0.98
Trav4-2A0A075B638 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Trav4-2A0A075B638 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Trav4-2A0A075B638 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Trav4-2A0A075B638 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Trav4-2A0A075B638 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Trav4-2A0A075B638 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Trav4-2A0A075B638 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Trav4-2A0A075B638 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Trav4-2A0A075B638 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Trav4-2A0A075B638 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Trav4-2A0A075B638 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC21.09■□□□□ 0.97
Trav4-2A0A075B638 Zfp131-207ENSMUST00000224946 1783 ntBASIC21.07■□□□□ 0.96
Trav4-2A0A075B638 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Trav4-2A0A075B638 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Trav4-2A0A075B638 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Trav4-2A0A075B638 Gm9905-201ENSMUST00000065740 1845 ntBASIC20.99■□□□□ 0.95
Trav4-2A0A075B638 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Trav4-2A0A075B638 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Trav4-2A0A075B638 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Trav4-2A0A075B638 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Trav4-2A0A075B638 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.95
Trav4-2A0A075B638 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC20.95■□□□□ 0.95
Trav4-2A0A075B638 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
Trav4-2A0A075B638 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Trav4-2A0A075B638 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Trav4-2A0A075B638 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Trav4-2A0A075B638 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
Trav4-2A0A075B638 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
Trav4-2A0A075B638 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
Trav4-2A0A075B638 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
Trav4-2A0A075B638 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Trav4-2A0A075B638 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
Trav4-2A0A075B638 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC20.87■□□□□ 0.93
Trav4-2A0A075B638 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Trav4-2A0A075B638 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Trav4-2A0A075B638 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Trav4-2A0A075B638 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Trav4-2A0A075B638 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Trav4-2A0A075B638 Gm6206-201ENSMUST00000133472 2199 ntBASIC20.83■□□□□ 0.93
Trav4-2A0A075B638 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Trav4-2A0A075B638 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Trav4-2A0A075B638 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC20.81■□□□□ 0.92
Trav4-2A0A075B638 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC20.76■□□□□ 0.91
Trav4-2A0A075B638 Zxda-201ENSMUST00000117281 2621 ntBASIC20.75■□□□□ 0.91
Trav4-2A0A075B638 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC20.75■□□□□ 0.91
Trav4-2A0A075B638 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC20.75■□□□□ 0.91
Trav4-2A0A075B638 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
Trav4-2A0A075B638 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Trav4-2A0A075B638 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Trav4-2A0A075B638 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Trav4-2A0A075B638 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Trav4-2A0A075B638 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Trav4-2A0A075B638 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Trav4-2A0A075B638 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Trav4-2A0A075B638 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Trav4-2A0A075B638 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Trav4-2A0A075B638 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC20.66■□□□□ 0.9
Trav4-2A0A075B638 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Trav4-2A0A075B638 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 36.4 ms