Protein–RNA interactions for Protein: A0A075B633

Trav8n-2, T cell receptor alpha variable 8n-2 (Fragment), mousemouse

Predictions only

Length 112 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8n-2A0A075B633 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
Trav8n-2A0A075B633 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
Trav8n-2A0A075B633 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC26.1■■□□□ 1.77
Trav8n-2A0A075B633 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
Trav8n-2A0A075B633 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
Trav8n-2A0A075B633 Gm10524-201ENSMUST00000181931 1893 ntBASIC26.04■■□□□ 1.76
Trav8n-2A0A075B633 Gm24804-201ENSMUST00000174982 85 ntBASIC26.03■■□□□ 1.76
Trav8n-2A0A075B633 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
Trav8n-2A0A075B633 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
Trav8n-2A0A075B633 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
Trav8n-2A0A075B633 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
Trav8n-2A0A075B633 CT025624.2-201ENSMUST00000223609 1909 ntBASIC25.94■■□□□ 1.74
Trav8n-2A0A075B633 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
Trav8n-2A0A075B633 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC25.89■■□□□ 1.74
Trav8n-2A0A075B633 Gm42596-201ENSMUST00000196305 1958 ntBASIC25.87■■□□□ 1.73
Trav8n-2A0A075B633 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
Trav8n-2A0A075B633 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
Trav8n-2A0A075B633 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC25.8■■□□□ 1.72
Trav8n-2A0A075B633 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
Trav8n-2A0A075B633 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
Trav8n-2A0A075B633 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC25.7■■□□□ 1.7
Trav8n-2A0A075B633 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
Trav8n-2A0A075B633 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC25.64■■□□□ 1.7
Trav8n-2A0A075B633 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC25.63■■□□□ 1.69
Trav8n-2A0A075B633 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
Trav8n-2A0A075B633 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
Trav8n-2A0A075B633 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC25.6■■□□□ 1.69
Trav8n-2A0A075B633 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC25.59■■□□□ 1.69
Trav8n-2A0A075B633 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
Trav8n-2A0A075B633 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC25.58■■□□□ 1.68
Trav8n-2A0A075B633 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
Trav8n-2A0A075B633 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC25.54■■□□□ 1.68
Trav8n-2A0A075B633 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
Trav8n-2A0A075B633 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
Trav8n-2A0A075B633 AC166822.3-201ENSMUST00000227394 661 ntBASIC25.53■■□□□ 1.68
Trav8n-2A0A075B633 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
Trav8n-2A0A075B633 Zfp131-205ENSMUST00000223812 663 ntBASIC25.49■■□□□ 1.67
Trav8n-2A0A075B633 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC25.48■■□□□ 1.67
Trav8n-2A0A075B633 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
Trav8n-2A0A075B633 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC25.44■■□□□ 1.66
Trav8n-2A0A075B633 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
Trav8n-2A0A075B633 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
Trav8n-2A0A075B633 AL845457.1-201ENSMUST00000197244 68 ntBASIC25.41■■□□□ 1.66
Trav8n-2A0A075B633 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC25.39■■□□□ 1.66
Trav8n-2A0A075B633 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC25.39■■□□□ 1.65
Trav8n-2A0A075B633 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC25.37■■□□□ 1.65
Trav8n-2A0A075B633 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC25.35■■□□□ 1.65
Trav8n-2A0A075B633 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
Trav8n-2A0A075B633 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
Trav8n-2A0A075B633 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
Trav8n-2A0A075B633 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
Trav8n-2A0A075B633 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC25.28■■□□□ 1.64
Trav8n-2A0A075B633 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
Trav8n-2A0A075B633 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
Trav8n-2A0A075B633 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
Trav8n-2A0A075B633 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC25.2■■□□□ 1.62
Trav8n-2A0A075B633 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC25.18■■□□□ 1.62
Trav8n-2A0A075B633 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC25.16■■□□□ 1.62
Trav8n-2A0A075B633 Gm16148-201ENSMUST00000119653 893 ntBASIC25.12■■□□□ 1.61
Trav8n-2A0A075B633 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC25.12■■□□□ 1.61
Trav8n-2A0A075B633 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC25.11■■□□□ 1.61
Trav8n-2A0A075B633 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
Trav8n-2A0A075B633 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
Trav8n-2A0A075B633 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
Trav8n-2A0A075B633 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
Trav8n-2A0A075B633 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
Trav8n-2A0A075B633 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC25.04■■□□□ 1.6
Trav8n-2A0A075B633 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
Trav8n-2A0A075B633 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
Trav8n-2A0A075B633 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC25.02■■□□□ 1.6
Trav8n-2A0A075B633 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC24.99■■□□□ 1.59
Trav8n-2A0A075B633 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC24.99■■□□□ 1.59
Trav8n-2A0A075B633 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
Trav8n-2A0A075B633 Zfp131-207ENSMUST00000224946 1783 ntBASIC24.95■■□□□ 1.58
Trav8n-2A0A075B633 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC24.94■■□□□ 1.58
Trav8n-2A0A075B633 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC24.93■■□□□ 1.58
Trav8n-2A0A075B633 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC24.92■■□□□ 1.58
Trav8n-2A0A075B633 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC24.92■■□□□ 1.58
Trav8n-2A0A075B633 Tdp2-203ENSMUST00000223804 1136 ntBASIC24.91■■□□□ 1.58
Trav8n-2A0A075B633 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC24.89■■□□□ 1.57
Trav8n-2A0A075B633 Peli2-204ENSMUST00000226513 1320 ntBASIC24.87■■□□□ 1.57
Trav8n-2A0A075B633 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC24.87■■□□□ 1.57
Trav8n-2A0A075B633 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC24.87■■□□□ 1.57
Trav8n-2A0A075B633 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC24.86■■□□□ 1.57
Trav8n-2A0A075B633 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC24.85■■□□□ 1.57
Trav8n-2A0A075B633 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
Trav8n-2A0A075B633 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
Trav8n-2A0A075B633 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
Trav8n-2A0A075B633 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
Trav8n-2A0A075B633 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC24.77■■□□□ 1.56
Trav8n-2A0A075B633 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC24.77■■□□□ 1.56
Trav8n-2A0A075B633 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC24.76■■□□□ 1.55
Trav8n-2A0A075B633 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC24.75■■□□□ 1.55
Trav8n-2A0A075B633 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC24.74■■□□□ 1.55
Trav8n-2A0A075B633 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC24.74■■□□□ 1.55
Trav8n-2A0A075B633 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
Trav8n-2A0A075B633 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC24.71■■□□□ 1.55
Trav8n-2A0A075B633 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
Trav8n-2A0A075B633 Mipep-204ENSMUST00000225043 1548 ntBASIC24.69■■□□□ 1.54
Trav8n-2A0A075B633 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC24.65■■□□□ 1.54
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms