Protein–RNA interactions for Protein: Q91VR5

Ddx1, ATP-dependent RNA helicase DDX1, mousemouse

Known RBP Predictions only

Length 740 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx1Q91VR5 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
Ddx1Q91VR5 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Ddx1Q91VR5 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Ddx1Q91VR5 Gm9959-201ENSMUST00000068277 390 ntBASIC22.13■■□□□ 1.13
Ddx1Q91VR5 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC22.13■■□□□ 1.13
Ddx1Q91VR5 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Ddx1Q91VR5 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC22.13■■□□□ 1.13
Ddx1Q91VR5 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC22.12■■□□□ 1.13
Ddx1Q91VR5 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
Ddx1Q91VR5 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Ddx1Q91VR5 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
Ddx1Q91VR5 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
Ddx1Q91VR5 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
Ddx1Q91VR5 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
Ddx1Q91VR5 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC22.12■■□□□ 1.13
Ddx1Q91VR5 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC22.12■■□□□ 1.13
Ddx1Q91VR5 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC22.12■■□□□ 1.13
Ddx1Q91VR5 Dmtn-209ENSMUST00000228295 2572 ntBASIC22.11■■□□□ 1.13
Ddx1Q91VR5 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC22.11■■□□□ 1.13
Ddx1Q91VR5 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC22.11■■□□□ 1.13
Ddx1Q91VR5 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
Ddx1Q91VR5 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC22.1■■□□□ 1.13
Ddx1Q91VR5 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Ddx1Q91VR5 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC22.1■■□□□ 1.13
Ddx1Q91VR5 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Ddx1Q91VR5 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
Ddx1Q91VR5 Nsd1-206ENSMUST00000224918 1001 ntBASIC22.1■■□□□ 1.13
Ddx1Q91VR5 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Ddx1Q91VR5 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Ddx1Q91VR5 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC22.09■■□□□ 1.13
Ddx1Q91VR5 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC22.09■■□□□ 1.13
Ddx1Q91VR5 Gm43592-201ENSMUST00000196922 1165 ntBASIC22.09■■□□□ 1.13
Ddx1Q91VR5 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC22.09■■□□□ 1.13
Ddx1Q91VR5 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Ddx1Q91VR5 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC22.08■■□□□ 1.13
Ddx1Q91VR5 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC22.08■■□□□ 1.13
Ddx1Q91VR5 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC22.08■■□□□ 1.12
Ddx1Q91VR5 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
Ddx1Q91VR5 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
Ddx1Q91VR5 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC22.08■■□□□ 1.12
Ddx1Q91VR5 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC22.08■■□□□ 1.12
Ddx1Q91VR5 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
Ddx1Q91VR5 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Ddx1Q91VR5 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC22.07■■□□□ 1.12
Ddx1Q91VR5 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC22.07■■□□□ 1.12
Ddx1Q91VR5 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC22.07■■□□□ 1.12
Ddx1Q91VR5 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC22.07■■□□□ 1.12
Ddx1Q91VR5 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC22.07■■□□□ 1.12
Ddx1Q91VR5 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Ddx1Q91VR5 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Ddx1Q91VR5 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC22.07■■□□□ 1.12
Ddx1Q91VR5 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC22.06■■□□□ 1.12
Ddx1Q91VR5 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
Ddx1Q91VR5 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Ddx1Q91VR5 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC22.05■■□□□ 1.12
Ddx1Q91VR5 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC22.05■■□□□ 1.12
Ddx1Q91VR5 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC22.05■■□□□ 1.12
Ddx1Q91VR5 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC22.05■■□□□ 1.12
Ddx1Q91VR5 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
Ddx1Q91VR5 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC22.05■■□□□ 1.12
Ddx1Q91VR5 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC22.05■■□□□ 1.12
Ddx1Q91VR5 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Ddx1Q91VR5 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC22.05■■□□□ 1.12
Ddx1Q91VR5 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Ddx1Q91VR5 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Ddx1Q91VR5 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
Ddx1Q91VR5 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Ddx1Q91VR5 Serp2-204ENSMUST00000228055 705 ntBASIC22.04■■□□□ 1.12
Ddx1Q91VR5 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Ddx1Q91VR5 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
Ddx1Q91VR5 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Ddx1Q91VR5 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC22.04■■□□□ 1.12
Ddx1Q91VR5 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Ddx1Q91VR5 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Ddx1Q91VR5 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC22.03■■□□□ 1.12
Ddx1Q91VR5 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC22.03■■□□□ 1.12
Ddx1Q91VR5 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
Ddx1Q91VR5 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Ddx1Q91VR5 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
Ddx1Q91VR5 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Ddx1Q91VR5 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
Ddx1Q91VR5 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Ddx1Q91VR5 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Ddx1Q91VR5 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Ddx1Q91VR5 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Ddx1Q91VR5 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Ddx1Q91VR5 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC22.02■■□□□ 1.11
Ddx1Q91VR5 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.11
Ddx1Q91VR5 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC22.01■■□□□ 1.11
Ddx1Q91VR5 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC22.01■■□□□ 1.11
Ddx1Q91VR5 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC22.01■■□□□ 1.11
Ddx1Q91VR5 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
Ddx1Q91VR5 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC22.01■■□□□ 1.11
Ddx1Q91VR5 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC22■■□□□ 1.11
Ddx1Q91VR5 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC22■■□□□ 1.11
Ddx1Q91VR5 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC22■■□□□ 1.11
Ddx1Q91VR5 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC22■■□□□ 1.11
Ddx1Q91VR5 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC22■■□□□ 1.11
Ddx1Q91VR5 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC21.99■■□□□ 1.11
Ddx1Q91VR5 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Retrieved 100 of 76,532 protein–RNA pairs in 57 ms