Protein–RNA interactions for Protein: Q5M6W3

Clhc1, Clathrin heavy chain linker domain-containing protein 1, mousemouse

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clhc1Q5M6W3 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
Clhc1Q5M6W3 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC20.44■□□□□ 0.86
Clhc1Q5M6W3 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Clhc1Q5M6W3 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC20.44■□□□□ 0.86
Clhc1Q5M6W3 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC20.44■□□□□ 0.86
Clhc1Q5M6W3 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Clhc1Q5M6W3 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Clhc1Q5M6W3 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Clhc1Q5M6W3 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC20.43■□□□□ 0.86
Clhc1Q5M6W3 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Clhc1Q5M6W3 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Clhc1Q5M6W3 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Clhc1Q5M6W3 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Clhc1Q5M6W3 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Clhc1Q5M6W3 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Clhc1Q5M6W3 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC20.42■□□□□ 0.86
Clhc1Q5M6W3 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
Clhc1Q5M6W3 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Clhc1Q5M6W3 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Clhc1Q5M6W3 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Clhc1Q5M6W3 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC20.42■□□□□ 0.86
Clhc1Q5M6W3 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC20.42■□□□□ 0.86
Clhc1Q5M6W3 AC115037.1-201ENSMUST00000223391 2173 ntBASIC20.42■□□□□ 0.86
Clhc1Q5M6W3 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Clhc1Q5M6W3 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Clhc1Q5M6W3 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Clhc1Q5M6W3 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Clhc1Q5M6W3 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Clhc1Q5M6W3 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Clhc1Q5M6W3 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Clhc1Q5M6W3 Terc-201ENSMUST00000082862 423 ntBASIC20.41■□□□□ 0.86
Clhc1Q5M6W3 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Clhc1Q5M6W3 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Clhc1Q5M6W3 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Clhc1Q5M6W3 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Clhc1Q5M6W3 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Clhc1Q5M6W3 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC20.4■□□□□ 0.86
Clhc1Q5M6W3 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Clhc1Q5M6W3 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Clhc1Q5M6W3 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Clhc1Q5M6W3 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC20.39■□□□□ 0.85
Clhc1Q5M6W3 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Clhc1Q5M6W3 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Clhc1Q5M6W3 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Clhc1Q5M6W3 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Clhc1Q5M6W3 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Clhc1Q5M6W3 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Clhc1Q5M6W3 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Clhc1Q5M6W3 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Clhc1Q5M6W3 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
Clhc1Q5M6W3 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC20.38■□□□□ 0.85
Clhc1Q5M6W3 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
Clhc1Q5M6W3 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Clhc1Q5M6W3 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC20.38■□□□□ 0.85
Clhc1Q5M6W3 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Clhc1Q5M6W3 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC20.38■□□□□ 0.85
Clhc1Q5M6W3 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC20.38■□□□□ 0.85
Clhc1Q5M6W3 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC20.38■□□□□ 0.85
Clhc1Q5M6W3 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Clhc1Q5M6W3 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
Clhc1Q5M6W3 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Clhc1Q5M6W3 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Clhc1Q5M6W3 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Clhc1Q5M6W3 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Clhc1Q5M6W3 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC20.37■□□□□ 0.85
Clhc1Q5M6W3 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Clhc1Q5M6W3 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Clhc1Q5M6W3 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC20.37■□□□□ 0.85
Clhc1Q5M6W3 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Clhc1Q5M6W3 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Clhc1Q5M6W3 Gm34220-201ENSMUST00000223001 2709 ntBASIC20.37■□□□□ 0.85
Clhc1Q5M6W3 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC20.37■□□□□ 0.85
Clhc1Q5M6W3 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
Clhc1Q5M6W3 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
Clhc1Q5M6W3 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Clhc1Q5M6W3 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Clhc1Q5M6W3 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Clhc1Q5M6W3 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
Clhc1Q5M6W3 AC164433.2-201ENSMUST00000226346 1701 ntBASIC20.36■□□□□ 0.85
Clhc1Q5M6W3 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Clhc1Q5M6W3 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Clhc1Q5M6W3 Scarna2-201ENSMUST00000157560 414 ntBASIC20.36■□□□□ 0.85
Clhc1Q5M6W3 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
Clhc1Q5M6W3 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Clhc1Q5M6W3 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
Clhc1Q5M6W3 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC20.35■□□□□ 0.85
Clhc1Q5M6W3 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Clhc1Q5M6W3 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Clhc1Q5M6W3 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Clhc1Q5M6W3 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
Clhc1Q5M6W3 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
Clhc1Q5M6W3 Gm22567-201ENSMUST00000175542 342 ntBASIC20.34■□□□□ 0.85
Clhc1Q5M6W3 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Clhc1Q5M6W3 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Clhc1Q5M6W3 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC20.34■□□□□ 0.85
Clhc1Q5M6W3 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Clhc1Q5M6W3 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Clhc1Q5M6W3 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Clhc1Q5M6W3 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Clhc1Q5M6W3 Gm9806-201ENSMUST00000051080 552 ntBASIC20.33■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 27.8 ms