Protein–RNA interactions for Protein: P97770

Thumpd3, THUMP domain-containing protein 3, mousemouse

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thumpd3P97770 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
Thumpd3P97770 Gm20634-201ENSMUST00000090779 2956 ntBASIC21.55■■□□□ 1.04
Thumpd3P97770 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Thumpd3P97770 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Thumpd3P97770 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC21.55■■□□□ 1.04
Thumpd3P97770 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC21.55■■□□□ 1.04
Thumpd3P97770 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Thumpd3P97770 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC21.55■■□□□ 1.04
Thumpd3P97770 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
Thumpd3P97770 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC21.55■■□□□ 1.04
Thumpd3P97770 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
Thumpd3P97770 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Thumpd3P97770 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Thumpd3P97770 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC21.54■■□□□ 1.04
Thumpd3P97770 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC21.54■■□□□ 1.04
Thumpd3P97770 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC21.54■■□□□ 1.04
Thumpd3P97770 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Thumpd3P97770 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Thumpd3P97770 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Thumpd3P97770 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Thumpd3P97770 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC21.53■■□□□ 1.04
Thumpd3P97770 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
Thumpd3P97770 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC21.53■■□□□ 1.04
Thumpd3P97770 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
Thumpd3P97770 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC21.52■■□□□ 1.04
Thumpd3P97770 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Thumpd3P97770 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC21.52■■□□□ 1.04
Thumpd3P97770 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC21.52■■□□□ 1.04
Thumpd3P97770 Gm5067-201ENSMUST00000170449 1009 ntBASIC21.52■■□□□ 1.04
Thumpd3P97770 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC21.52■■□□□ 1.04
Thumpd3P97770 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC21.52■■□□□ 1.04
Thumpd3P97770 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.04
Thumpd3P97770 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
Thumpd3P97770 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Thumpd3P97770 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Thumpd3P97770 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Thumpd3P97770 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Thumpd3P97770 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC21.51■■□□□ 1.03
Thumpd3P97770 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Thumpd3P97770 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Thumpd3P97770 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC21.5■■□□□ 1.03
Thumpd3P97770 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Thumpd3P97770 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Thumpd3P97770 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC21.49■■□□□ 1.03
Thumpd3P97770 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Thumpd3P97770 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Thumpd3P97770 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Thumpd3P97770 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Thumpd3P97770 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC21.49■■□□□ 1.03
Thumpd3P97770 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC21.49■■□□□ 1.03
Thumpd3P97770 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC21.49■■□□□ 1.03
Thumpd3P97770 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
Thumpd3P97770 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
Thumpd3P97770 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Thumpd3P97770 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC21.48■■□□□ 1.03
Thumpd3P97770 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Thumpd3P97770 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
Thumpd3P97770 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
Thumpd3P97770 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Thumpd3P97770 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Thumpd3P97770 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
Thumpd3P97770 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Thumpd3P97770 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Thumpd3P97770 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Thumpd3P97770 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Thumpd3P97770 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Thumpd3P97770 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Thumpd3P97770 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Thumpd3P97770 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Thumpd3P97770 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Thumpd3P97770 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
Thumpd3P97770 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC21.46■■□□□ 1.03
Thumpd3P97770 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Thumpd3P97770 Gm10420-201ENSMUST00000121713 882 ntBASIC21.46■■□□□ 1.03
Thumpd3P97770 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Thumpd3P97770 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Thumpd3P97770 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Thumpd3P97770 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
Thumpd3P97770 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Thumpd3P97770 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Thumpd3P97770 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Thumpd3P97770 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Thumpd3P97770 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
Thumpd3P97770 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.02
Thumpd3P97770 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC21.45■■□□□ 1.02
Thumpd3P97770 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Thumpd3P97770 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.02
Thumpd3P97770 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Thumpd3P97770 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Thumpd3P97770 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC21.44■■□□□ 1.02
Thumpd3P97770 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Thumpd3P97770 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Thumpd3P97770 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC21.43■■□□□ 1.02
Thumpd3P97770 Gm12504-201ENSMUST00000120860 2231 ntBASIC21.43■■□□□ 1.02
Thumpd3P97770 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Thumpd3P97770 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC21.42■■□□□ 1.02
Thumpd3P97770 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Thumpd3P97770 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC21.42■■□□□ 1.02
Thumpd3P97770 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC21.42■■□□□ 1.02
Thumpd3P97770 AC117245.4-201ENSMUST00000217388 1646 ntBASIC21.41■■□□□ 1.02
Retrieved 100 of 76,532 protein–RNA pairs in 47.2 ms