Protein–RNA interactions for Protein: P51944

Ccnf, Cyclin-F, mousemouse

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CcnfP51944 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
CcnfP51944 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
CcnfP51944 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CcnfP51944 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CcnfP51944 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CcnfP51944 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CcnfP51944 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CcnfP51944 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC20.31■□□□□ 0.84
CcnfP51944 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC20.31■□□□□ 0.84
CcnfP51944 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CcnfP51944 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CcnfP51944 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC20.31■□□□□ 0.84
CcnfP51944 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC20.31■□□□□ 0.84
CcnfP51944 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
CcnfP51944 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
CcnfP51944 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CcnfP51944 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
CcnfP51944 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CcnfP51944 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
CcnfP51944 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CcnfP51944 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
CcnfP51944 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CcnfP51944 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC20.29■□□□□ 0.84
CcnfP51944 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
CcnfP51944 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CcnfP51944 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
CcnfP51944 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
CcnfP51944 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CcnfP51944 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC20.28■□□□□ 0.84
CcnfP51944 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CcnfP51944 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
CcnfP51944 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CcnfP51944 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CcnfP51944 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC20.28■□□□□ 0.84
CcnfP51944 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
CcnfP51944 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CcnfP51944 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CcnfP51944 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
CcnfP51944 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
CcnfP51944 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
CcnfP51944 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CcnfP51944 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CcnfP51944 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CcnfP51944 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CcnfP51944 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC20.26■□□□□ 0.83
CcnfP51944 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
CcnfP51944 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
CcnfP51944 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CcnfP51944 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC20.25■□□□□ 0.83
CcnfP51944 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CcnfP51944 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CcnfP51944 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CcnfP51944 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC20.25■□□□□ 0.83
CcnfP51944 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CcnfP51944 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CcnfP51944 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
CcnfP51944 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CcnfP51944 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CcnfP51944 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
CcnfP51944 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
CcnfP51944 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CcnfP51944 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CcnfP51944 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CcnfP51944 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
CcnfP51944 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CcnfP51944 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
CcnfP51944 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC20.23■□□□□ 0.83
CcnfP51944 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CcnfP51944 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
CcnfP51944 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CcnfP51944 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
CcnfP51944 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
CcnfP51944 AC164883.3-201ENSMUST00000227396 1774 ntBASIC20.22■□□□□ 0.83
CcnfP51944 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CcnfP51944 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
CcnfP51944 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CcnfP51944 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
CcnfP51944 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
CcnfP51944 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC20.21■□□□□ 0.83
CcnfP51944 Pkd1-207ENSMUST00000228550 1050 ntBASIC20.21■□□□□ 0.83
CcnfP51944 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
CcnfP51944 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CcnfP51944 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CcnfP51944 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CcnfP51944 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC20.2■□□□□ 0.82
CcnfP51944 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CcnfP51944 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC20.2■□□□□ 0.82
CcnfP51944 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CcnfP51944 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CcnfP51944 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CcnfP51944 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CcnfP51944 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
CcnfP51944 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CcnfP51944 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
CcnfP51944 Gm44428-201ENSMUST00000204474 874 ntBASIC20.19■□□□□ 0.82
CcnfP51944 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CcnfP51944 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CcnfP51944 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CcnfP51944 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
CcnfP51944 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 14.9 ms