Protein–RNA interactions for Protein: P41245

Mmp9, Matrix metalloproteinase-9, mousemouse

Predictions only

Length 730 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp9P41245 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Mmp9P41245 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Mmp9P41245 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Mmp9P41245 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC17.74■□□□□ 0.43
Mmp9P41245 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Mmp9P41245 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
Mmp9P41245 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Mmp9P41245 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Mmp9P41245 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Mmp9P41245 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC17.73■□□□□ 0.43
Mmp9P41245 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC17.72■□□□□ 0.43
Mmp9P41245 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Mmp9P41245 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Mmp9P41245 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC17.72■□□□□ 0.43
Mmp9P41245 Gm11175-201ENSMUST00000116172 543 ntBASIC17.72■□□□□ 0.43
Mmp9P41245 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Mmp9P41245 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Mmp9P41245 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC17.71■□□□□ 0.43
Mmp9P41245 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Mmp9P41245 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC17.71■□□□□ 0.43
Mmp9P41245 Cap2-205ENSMUST00000225824 1634 ntBASIC17.71■□□□□ 0.43
Mmp9P41245 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Mmp9P41245 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
Mmp9P41245 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
Mmp9P41245 Gm10616-201ENSMUST00000205285 2127 ntBASIC17.71■□□□□ 0.42
Mmp9P41245 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Mmp9P41245 Gm4430-201ENSMUST00000192413 1943 ntBASIC17.7■□□□□ 0.42
Mmp9P41245 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Mmp9P41245 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC17.7■□□□□ 0.42
Mmp9P41245 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Mmp9P41245 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Mmp9P41245 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Mmp9P41245 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC17.7■□□□□ 0.42
Mmp9P41245 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Mmp9P41245 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Mmp9P41245 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Mmp9P41245 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Mmp9P41245 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Mmp9P41245 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Mmp9P41245 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Mmp9P41245 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Mmp9P41245 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC17.68■□□□□ 0.42
Mmp9P41245 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Mmp9P41245 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC17.68■□□□□ 0.42
Mmp9P41245 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Mmp9P41245 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC17.68■□□□□ 0.42
Mmp9P41245 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Mmp9P41245 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Mmp9P41245 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Mmp9P41245 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Mmp9P41245 Golph3-202ENSMUST00000226517 2359 ntBASIC17.67■□□□□ 0.42
Mmp9P41245 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Mmp9P41245 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Mmp9P41245 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Mmp9P41245 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Mmp9P41245 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Mmp9P41245 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Mmp9P41245 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Mmp9P41245 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC17.66■□□□□ 0.42
Mmp9P41245 Gm34220-201ENSMUST00000223001 2709 ntBASIC17.66■□□□□ 0.42
Mmp9P41245 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC17.66■□□□□ 0.42
Mmp9P41245 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Mmp9P41245 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Mmp9P41245 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Mmp9P41245 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Mmp9P41245 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Mmp9P41245 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Mmp9P41245 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Mmp9P41245 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Mmp9P41245 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Mmp9P41245 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Mmp9P41245 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Mmp9P41245 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Mmp9P41245 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Mmp9P41245 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Mmp9P41245 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.42
Mmp9P41245 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Mmp9P41245 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Mmp9P41245 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
Mmp9P41245 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Mmp9P41245 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Mmp9P41245 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Mmp9P41245 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Mmp9P41245 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Mmp9P41245 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Mmp9P41245 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Mmp9P41245 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Mmp9P41245 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Mmp9P41245 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Mmp9P41245 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Mmp9P41245 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Mmp9P41245 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Mmp9P41245 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Mmp9P41245 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC17.62■□□□□ 0.41
Mmp9P41245 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Mmp9P41245 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Mmp9P41245 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Mmp9P41245 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Mmp9P41245 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC17.61■□□□□ 0.41
Mmp9P41245 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 39.4 ms