Protein–RNA interactions for Protein: P31649

Slc6a13, Sodium- and chloride-dependent GABA transporter 2, mousemouse

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a13P31649 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC21.75■■□□□ 1.07
Slc6a13P31649 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
Slc6a13P31649 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
Slc6a13P31649 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
Slc6a13P31649 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC21.74■■□□□ 1.07
Slc6a13P31649 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Slc6a13P31649 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Slc6a13P31649 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Slc6a13P31649 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Slc6a13P31649 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Slc6a13P31649 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Slc6a13P31649 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Slc6a13P31649 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Slc6a13P31649 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC21.73■■□□□ 1.07
Slc6a13P31649 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Slc6a13P31649 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC21.73■■□□□ 1.07
Slc6a13P31649 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Slc6a13P31649 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC21.72■■□□□ 1.07
Slc6a13P31649 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Slc6a13P31649 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
Slc6a13P31649 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Slc6a13P31649 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Slc6a13P31649 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Slc6a13P31649 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC21.71■■□□□ 1.07
Slc6a13P31649 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
Slc6a13P31649 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Slc6a13P31649 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Slc6a13P31649 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC21.71■■□□□ 1.07
Slc6a13P31649 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Slc6a13P31649 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Slc6a13P31649 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Slc6a13P31649 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.07
Slc6a13P31649 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Slc6a13P31649 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Slc6a13P31649 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Slc6a13P31649 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Slc6a13P31649 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Slc6a13P31649 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Slc6a13P31649 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC21.7■■□□□ 1.06
Slc6a13P31649 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Slc6a13P31649 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC21.7■■□□□ 1.06
Slc6a13P31649 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Slc6a13P31649 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Slc6a13P31649 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
Slc6a13P31649 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Slc6a13P31649 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
Slc6a13P31649 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Slc6a13P31649 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Slc6a13P31649 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
Slc6a13P31649 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Slc6a13P31649 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Slc6a13P31649 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC21.68■■□□□ 1.06
Slc6a13P31649 Gm43566-201ENSMUST00000196851 808 ntBASIC21.68■■□□□ 1.06
Slc6a13P31649 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Slc6a13P31649 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Slc6a13P31649 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
Slc6a13P31649 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Slc6a13P31649 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Slc6a13P31649 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
Slc6a13P31649 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Slc6a13P31649 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Slc6a13P31649 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Slc6a13P31649 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Slc6a13P31649 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC21.66■■□□□ 1.06
Slc6a13P31649 Dmtn-209ENSMUST00000228295 2572 ntBASIC21.66■■□□□ 1.06
Slc6a13P31649 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC21.66■■□□□ 1.06
Slc6a13P31649 Gm28536-201ENSMUST00000190971 1317 ntBASIC21.66■■□□□ 1.06
Slc6a13P31649 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
Slc6a13P31649 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC21.66■■□□□ 1.06
Slc6a13P31649 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC21.66■■□□□ 1.06
Slc6a13P31649 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
Slc6a13P31649 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Slc6a13P31649 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Slc6a13P31649 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Slc6a13P31649 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
Slc6a13P31649 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Slc6a13P31649 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Slc6a13P31649 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Slc6a13P31649 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Slc6a13P31649 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
Slc6a13P31649 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC21.64■■□□□ 1.06
Slc6a13P31649 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Slc6a13P31649 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC21.64■■□□□ 1.05
Slc6a13P31649 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Slc6a13P31649 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Slc6a13P31649 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Slc6a13P31649 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Slc6a13P31649 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
Slc6a13P31649 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Slc6a13P31649 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Slc6a13P31649 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Slc6a13P31649 Gm42418-201ENSMUST00000182010 1831 ntBASIC21.62■■□□□ 1.05
Slc6a13P31649 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Slc6a13P31649 AC158990.1-201ENSMUST00000221450 2016 ntBASIC21.62■■□□□ 1.05
Slc6a13P31649 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Slc6a13P31649 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC21.62■■□□□ 1.05
Slc6a13P31649 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Slc6a13P31649 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Slc6a13P31649 Gm37415-201ENSMUST00000192265 2054 ntBASIC21.62■■□□□ 1.05
Slc6a13P31649 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC21.61■■□□□ 1.05
Retrieved 100 of 76,532 protein–RNA pairs in 56.9 ms