Protein–RNA interactions for Protein: P23440

Pde6b, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, mousemouse

Predictions only

Length 856 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6bP23440 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Pde6bP23440 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Pde6bP23440 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Pde6bP23440 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Pde6bP23440 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC23.17■■□□□ 1.3
Pde6bP23440 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Pde6bP23440 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
Pde6bP23440 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC23.16■■□□□ 1.3
Pde6bP23440 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC23.16■■□□□ 1.3
Pde6bP23440 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC23.16■■□□□ 1.3
Pde6bP23440 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC23.16■■□□□ 1.3
Pde6bP23440 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Pde6bP23440 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC23.15■■□□□ 1.3
Pde6bP23440 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Pde6bP23440 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC23.15■■□□□ 1.3
Pde6bP23440 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Pde6bP23440 Gm9847-201ENSMUST00000052528 599 ntBASIC23.15■■□□□ 1.3
Pde6bP23440 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Pde6bP23440 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC23.15■■□□□ 1.3
Pde6bP23440 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Pde6bP23440 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Pde6bP23440 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Pde6bP23440 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
Pde6bP23440 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC23.14■■□□□ 1.3
Pde6bP23440 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
Pde6bP23440 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
Pde6bP23440 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
Pde6bP23440 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
Pde6bP23440 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC23.14■■□□□ 1.29
Pde6bP23440 Gm43034-201ENSMUST00000198678 1364 ntBASIC23.14■■□□□ 1.29
Pde6bP23440 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC23.13■■□□□ 1.29
Pde6bP23440 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Pde6bP23440 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Pde6bP23440 Gm8093-201ENSMUST00000128935 1892 ntBASIC23.13■■□□□ 1.29
Pde6bP23440 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
Pde6bP23440 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
Pde6bP23440 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
Pde6bP23440 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Pde6bP23440 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Pde6bP23440 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Pde6bP23440 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Pde6bP23440 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
Pde6bP23440 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
Pde6bP23440 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC23.1■■□□□ 1.29
Pde6bP23440 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Pde6bP23440 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Pde6bP23440 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Pde6bP23440 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Pde6bP23440 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
Pde6bP23440 Gm17641-201ENSMUST00000166328 2350 ntBASIC23.09■■□□□ 1.29
Pde6bP23440 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
Pde6bP23440 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
Pde6bP23440 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Pde6bP23440 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC23.09■■□□□ 1.29
Pde6bP23440 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Pde6bP23440 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC23.09■■□□□ 1.29
Pde6bP23440 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Pde6bP23440 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Pde6bP23440 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC23.08■■□□□ 1.29
Pde6bP23440 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
Pde6bP23440 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC23.08■■□□□ 1.29
Pde6bP23440 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC23.08■■□□□ 1.29
Pde6bP23440 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
Pde6bP23440 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC23.07■■□□□ 1.28
Pde6bP23440 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
Pde6bP23440 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
Pde6bP23440 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC23.07■■□□□ 1.28
Pde6bP23440 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Pde6bP23440 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC23.07■■□□□ 1.28
Pde6bP23440 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Pde6bP23440 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC23.07■■□□□ 1.28
Pde6bP23440 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Pde6bP23440 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Pde6bP23440 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Pde6bP23440 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
Pde6bP23440 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Pde6bP23440 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Pde6bP23440 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Pde6bP23440 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC23.05■■□□□ 1.28
Pde6bP23440 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
Pde6bP23440 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC23.05■■□□□ 1.28
Pde6bP23440 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC23.05■■□□□ 1.28
Pde6bP23440 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC23.05■■□□□ 1.28
Pde6bP23440 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC23.05■■□□□ 1.28
Pde6bP23440 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
Pde6bP23440 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC23.04■■□□□ 1.28
Pde6bP23440 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC23.04■■□□□ 1.28
Pde6bP23440 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC23.04■■□□□ 1.28
Pde6bP23440 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Pde6bP23440 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
Pde6bP23440 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Pde6bP23440 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Pde6bP23440 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC23.04■■□□□ 1.28
Pde6bP23440 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC23.04■■□□□ 1.28
Pde6bP23440 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
Pde6bP23440 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
Pde6bP23440 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Pde6bP23440 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Pde6bP23440 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC23.03■■□□□ 1.28
Pde6bP23440 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Retrieved 100 of 76,532 protein–RNA pairs in 49.1 ms