Protein–RNA interactions for Protein: A0A0B4J1H1

Trbv12-2, T cell receptor beta, variable 12-2 (Fragment), mousemouse

Predictions only

Length 124 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv12-2A0A0B4J1H1 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
Trbv12-2A0A0B4J1H1 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC16.85■□□□□ 0.29
Trbv12-2A0A0B4J1H1 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trbv12-2A0A0B4J1H1 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trbv12-2A0A0B4J1H1 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Trbv12-2A0A0B4J1H1 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC16.84■□□□□ 0.29
Trbv12-2A0A0B4J1H1 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC16.84■□□□□ 0.29
Trbv12-2A0A0B4J1H1 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trbv12-2A0A0B4J1H1 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Trbv12-2A0A0B4J1H1 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trbv12-2A0A0B4J1H1 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC16.83■□□□□ 0.28
Trbv12-2A0A0B4J1H1 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trbv12-2A0A0B4J1H1 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
Trbv12-2A0A0B4J1H1 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trbv12-2A0A0B4J1H1 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Trbv12-2A0A0B4J1H1 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trbv12-2A0A0B4J1H1 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trbv12-2A0A0B4J1H1 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC16.83■□□□□ 0.28
Trbv12-2A0A0B4J1H1 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trbv12-2A0A0B4J1H1 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Trbv12-2A0A0B4J1H1 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trbv12-2A0A0B4J1H1 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trbv12-2A0A0B4J1H1 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC16.82■□□□□ 0.28
Trbv12-2A0A0B4J1H1 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trbv12-2A0A0B4J1H1 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC16.82■□□□□ 0.28
Trbv12-2A0A0B4J1H1 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Trbv12-2A0A0B4J1H1 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trbv12-2A0A0B4J1H1 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trbv12-2A0A0B4J1H1 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trbv12-2A0A0B4J1H1 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trbv12-2A0A0B4J1H1 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Trbv12-2A0A0B4J1H1 Gm12818-201ENSMUST00000117562 1349 ntBASIC16.81■□□□□ 0.28
Trbv12-2A0A0B4J1H1 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trbv12-2A0A0B4J1H1 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trbv12-2A0A0B4J1H1 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC16.81■□□□□ 0.28
Trbv12-2A0A0B4J1H1 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Trbv12-2A0A0B4J1H1 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trbv12-2A0A0B4J1H1 Gm43403-201ENSMUST00000198011 1786 ntBASIC16.81■□□□□ 0.28
Trbv12-2A0A0B4J1H1 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trbv12-2A0A0B4J1H1 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
Trbv12-2A0A0B4J1H1 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trbv12-2A0A0B4J1H1 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Trbv12-2A0A0B4J1H1 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trbv12-2A0A0B4J1H1 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Trbv12-2A0A0B4J1H1 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Trbv12-2A0A0B4J1H1 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Trbv12-2A0A0B4J1H1 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trbv12-2A0A0B4J1H1 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trbv12-2A0A0B4J1H1 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC16.79■□□□□ 0.28
Trbv12-2A0A0B4J1H1 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC16.79■□□□□ 0.28
Trbv12-2A0A0B4J1H1 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trbv12-2A0A0B4J1H1 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trbv12-2A0A0B4J1H1 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trbv12-2A0A0B4J1H1 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trbv12-2A0A0B4J1H1 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trbv12-2A0A0B4J1H1 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trbv12-2A0A0B4J1H1 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Trbv12-2A0A0B4J1H1 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Trbv12-2A0A0B4J1H1 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trbv12-2A0A0B4J1H1 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Trbv12-2A0A0B4J1H1 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC16.78■□□□□ 0.28
Trbv12-2A0A0B4J1H1 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Trbv12-2A0A0B4J1H1 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trbv12-2A0A0B4J1H1 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
Trbv12-2A0A0B4J1H1 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trbv12-2A0A0B4J1H1 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Trbv12-2A0A0B4J1H1 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trbv12-2A0A0B4J1H1 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC16.77■□□□□ 0.28
Trbv12-2A0A0B4J1H1 Mir3960-201ENSMUST00000198213 73 ntBASIC16.77■□□□□ 0.28
Trbv12-2A0A0B4J1H1 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trbv12-2A0A0B4J1H1 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trbv12-2A0A0B4J1H1 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trbv12-2A0A0B4J1H1 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trbv12-2A0A0B4J1H1 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trbv12-2A0A0B4J1H1 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trbv12-2A0A0B4J1H1 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trbv12-2A0A0B4J1H1 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Trbv12-2A0A0B4J1H1 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Trbv12-2A0A0B4J1H1 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Trbv12-2A0A0B4J1H1 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trbv12-2A0A0B4J1H1 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trbv12-2A0A0B4J1H1 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trbv12-2A0A0B4J1H1 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Trbv12-2A0A0B4J1H1 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trbv12-2A0A0B4J1H1 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trbv12-2A0A0B4J1H1 Gm4430-201ENSMUST00000192413 1943 ntBASIC16.75■□□□□ 0.27
Trbv12-2A0A0B4J1H1 Gm34220-201ENSMUST00000223001 2709 ntBASIC16.75■□□□□ 0.27
Trbv12-2A0A0B4J1H1 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trbv12-2A0A0B4J1H1 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Trbv12-2A0A0B4J1H1 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trbv12-2A0A0B4J1H1 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC16.75■□□□□ 0.27
Trbv12-2A0A0B4J1H1 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC16.74■□□□□ 0.27
Trbv12-2A0A0B4J1H1 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trbv12-2A0A0B4J1H1 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Trbv12-2A0A0B4J1H1 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
Trbv12-2A0A0B4J1H1 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC16.74■□□□□ 0.27
Trbv12-2A0A0B4J1H1 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trbv12-2A0A0B4J1H1 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trbv12-2A0A0B4J1H1 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trbv12-2A0A0B4J1H1 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 50.8 ms