Protein–RNA interactions for Protein: A0A0A6YWQ1

Trbv23, T cell receptor beta, variable V23 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv23A0A0A6YWQ1 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Trbv23A0A0A6YWQ1 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trbv23A0A0A6YWQ1 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC18.21■□□□□ 0.51
Trbv23A0A0A6YWQ1 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trbv23A0A0A6YWQ1 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trbv23A0A0A6YWQ1 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trbv23A0A0A6YWQ1 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trbv23A0A0A6YWQ1 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.5
Trbv23A0A0A6YWQ1 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trbv23A0A0A6YWQ1 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trbv23A0A0A6YWQ1 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trbv23A0A0A6YWQ1 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trbv23A0A0A6YWQ1 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
Trbv23A0A0A6YWQ1 AC153911.1-201ENSMUST00000220378 758 ntBASIC18.2■□□□□ 0.5
Trbv23A0A0A6YWQ1 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trbv23A0A0A6YWQ1 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trbv23A0A0A6YWQ1 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC18.2■□□□□ 0.5
Trbv23A0A0A6YWQ1 Gm34220-201ENSMUST00000223001 2709 ntBASIC18.2■□□□□ 0.5
Trbv23A0A0A6YWQ1 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Trbv23A0A0A6YWQ1 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trbv23A0A0A6YWQ1 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trbv23A0A0A6YWQ1 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Trbv23A0A0A6YWQ1 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Trbv23A0A0A6YWQ1 Gm28731-201ENSMUST00000185564 1569 ntBASIC18.19■□□□□ 0.5
Trbv23A0A0A6YWQ1 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC18.19■□□□□ 0.5
Trbv23A0A0A6YWQ1 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Trbv23A0A0A6YWQ1 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trbv23A0A0A6YWQ1 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trbv23A0A0A6YWQ1 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trbv23A0A0A6YWQ1 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC18.19■□□□□ 0.5
Trbv23A0A0A6YWQ1 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC18.19■□□□□ 0.5
Trbv23A0A0A6YWQ1 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trbv23A0A0A6YWQ1 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Trbv23A0A0A6YWQ1 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Trbv23A0A0A6YWQ1 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trbv23A0A0A6YWQ1 AC115037.1-201ENSMUST00000223391 2173 ntBASIC18.18■□□□□ 0.5
Trbv23A0A0A6YWQ1 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Trbv23A0A0A6YWQ1 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Trbv23A0A0A6YWQ1 Terc-201ENSMUST00000082862 423 ntBASIC18.18■□□□□ 0.5
Trbv23A0A0A6YWQ1 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trbv23A0A0A6YWQ1 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trbv23A0A0A6YWQ1 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Trbv23A0A0A6YWQ1 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trbv23A0A0A6YWQ1 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trbv23A0A0A6YWQ1 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC18.17■□□□□ 0.5
Trbv23A0A0A6YWQ1 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
Trbv23A0A0A6YWQ1 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trbv23A0A0A6YWQ1 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trbv23A0A0A6YWQ1 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trbv23A0A0A6YWQ1 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC18.17■□□□□ 0.5
Trbv23A0A0A6YWQ1 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Trbv23A0A0A6YWQ1 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trbv23A0A0A6YWQ1 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trbv23A0A0A6YWQ1 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trbv23A0A0A6YWQ1 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trbv23A0A0A6YWQ1 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trbv23A0A0A6YWQ1 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trbv23A0A0A6YWQ1 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC18.16■□□□□ 0.5
Trbv23A0A0A6YWQ1 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trbv23A0A0A6YWQ1 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trbv23A0A0A6YWQ1 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Trbv23A0A0A6YWQ1 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trbv23A0A0A6YWQ1 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trbv23A0A0A6YWQ1 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Trbv23A0A0A6YWQ1 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trbv23A0A0A6YWQ1 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trbv23A0A0A6YWQ1 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC18.15■□□□□ 0.5
Trbv23A0A0A6YWQ1 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Trbv23A0A0A6YWQ1 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trbv23A0A0A6YWQ1 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trbv23A0A0A6YWQ1 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Trbv23A0A0A6YWQ1 Scarna2-201ENSMUST00000157560 414 ntBASIC18.15■□□□□ 0.5
Trbv23A0A0A6YWQ1 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Trbv23A0A0A6YWQ1 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Trbv23A0A0A6YWQ1 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Trbv23A0A0A6YWQ1 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Trbv23A0A0A6YWQ1 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trbv23A0A0A6YWQ1 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
Trbv23A0A0A6YWQ1 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trbv23A0A0A6YWQ1 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Trbv23A0A0A6YWQ1 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Trbv23A0A0A6YWQ1 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
Trbv23A0A0A6YWQ1 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Trbv23A0A0A6YWQ1 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC18.14■□□□□ 0.49
Trbv23A0A0A6YWQ1 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Trbv23A0A0A6YWQ1 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trbv23A0A0A6YWQ1 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trbv23A0A0A6YWQ1 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Trbv23A0A0A6YWQ1 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trbv23A0A0A6YWQ1 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
Trbv23A0A0A6YWQ1 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Trbv23A0A0A6YWQ1 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trbv23A0A0A6YWQ1 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC18.13■□□□□ 0.49
Trbv23A0A0A6YWQ1 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trbv23A0A0A6YWQ1 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trbv23A0A0A6YWQ1 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trbv23A0A0A6YWQ1 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Trbv23A0A0A6YWQ1 Gm16437-201ENSMUST00000025669 507 ntBASIC18.12■□□□□ 0.49
Trbv23A0A0A6YWQ1 Gm9806-201ENSMUST00000051080 552 ntBASIC18.12■□□□□ 0.49
Trbv23A0A0A6YWQ1 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 21.4 ms