Protein–RNA interactions for Protein: Q9R1R0

Lhx6, LIM/homeobox protein Lhx6, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx6Q9R1R0 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Lhx6Q9R1R0 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Lhx6Q9R1R0 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Lhx6Q9R1R0 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Lhx6Q9R1R0 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Lhx6Q9R1R0 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC19.94■□□□□ 0.78
Lhx6Q9R1R0 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Lhx6Q9R1R0 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Lhx6Q9R1R0 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Lhx6Q9R1R0 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Lhx6Q9R1R0 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Lhx6Q9R1R0 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Lhx6Q9R1R0 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Lhx6Q9R1R0 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC19.92■□□□□ 0.78
Lhx6Q9R1R0 Gm16464-201ENSMUST00000117815 1095 ntBASIC19.92■□□□□ 0.78
Lhx6Q9R1R0 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC19.92■□□□□ 0.78
Lhx6Q9R1R0 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
Lhx6Q9R1R0 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Lhx6Q9R1R0 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Lhx6Q9R1R0 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
Lhx6Q9R1R0 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Lhx6Q9R1R0 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Lhx6Q9R1R0 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC19.91■□□□□ 0.78
Lhx6Q9R1R0 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Lhx6Q9R1R0 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Lhx6Q9R1R0 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
Lhx6Q9R1R0 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
Lhx6Q9R1R0 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
Lhx6Q9R1R0 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC19.9■□□□□ 0.78
Lhx6Q9R1R0 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Lhx6Q9R1R0 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Lhx6Q9R1R0 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
Lhx6Q9R1R0 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Lhx6Q9R1R0 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Lhx6Q9R1R0 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Lhx6Q9R1R0 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Lhx6Q9R1R0 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC19.89■□□□□ 0.77
Lhx6Q9R1R0 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC19.89■□□□□ 0.77
Lhx6Q9R1R0 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Lhx6Q9R1R0 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Lhx6Q9R1R0 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Lhx6Q9R1R0 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
Lhx6Q9R1R0 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Lhx6Q9R1R0 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Lhx6Q9R1R0 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Lhx6Q9R1R0 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC19.88■□□□□ 0.77
Lhx6Q9R1R0 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Lhx6Q9R1R0 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Lhx6Q9R1R0 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
Lhx6Q9R1R0 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Lhx6Q9R1R0 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Lhx6Q9R1R0 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
Lhx6Q9R1R0 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Lhx6Q9R1R0 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC19.87■□□□□ 0.77
Lhx6Q9R1R0 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC19.87■□□□□ 0.77
Lhx6Q9R1R0 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Lhx6Q9R1R0 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Lhx6Q9R1R0 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC19.86■□□□□ 0.77
Lhx6Q9R1R0 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC19.86■□□□□ 0.77
Lhx6Q9R1R0 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Lhx6Q9R1R0 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Lhx6Q9R1R0 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC19.86■□□□□ 0.77
Lhx6Q9R1R0 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Lhx6Q9R1R0 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Lhx6Q9R1R0 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
Lhx6Q9R1R0 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Lhx6Q9R1R0 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Lhx6Q9R1R0 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Lhx6Q9R1R0 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Lhx6Q9R1R0 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
Lhx6Q9R1R0 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
Lhx6Q9R1R0 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Lhx6Q9R1R0 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC19.84■□□□□ 0.77
Lhx6Q9R1R0 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC19.84■□□□□ 0.77
Lhx6Q9R1R0 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Lhx6Q9R1R0 Gm40881-201ENSMUST00000223397 166 ntBASIC19.84■□□□□ 0.77
Lhx6Q9R1R0 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Lhx6Q9R1R0 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Lhx6Q9R1R0 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Lhx6Q9R1R0 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Lhx6Q9R1R0 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Lhx6Q9R1R0 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Lhx6Q9R1R0 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Lhx6Q9R1R0 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC19.83■□□□□ 0.77
Lhx6Q9R1R0 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Lhx6Q9R1R0 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC19.83■□□□□ 0.77
Lhx6Q9R1R0 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC19.83■□□□□ 0.76
Lhx6Q9R1R0 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Lhx6Q9R1R0 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Lhx6Q9R1R0 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Lhx6Q9R1R0 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Lhx6Q9R1R0 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Lhx6Q9R1R0 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC19.82■□□□□ 0.76
Lhx6Q9R1R0 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Lhx6Q9R1R0 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Lhx6Q9R1R0 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Lhx6Q9R1R0 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Lhx6Q9R1R0 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Lhx6Q9R1R0 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC19.82■□□□□ 0.76
Lhx6Q9R1R0 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 69.4 ms