Protein–RNA interactions for Protein: Q9DC48

Cdc40, Pre-mRNA-processing factor 17, mousemouse

Known RBP Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40Q9DC48 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
Cdc40Q9DC48 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Cdc40Q9DC48 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Cdc40Q9DC48 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Cdc40Q9DC48 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC19.78■□□□□ 0.76
Cdc40Q9DC48 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
Cdc40Q9DC48 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Cdc40Q9DC48 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Cdc40Q9DC48 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Cdc40Q9DC48 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Cdc40Q9DC48 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Cdc40Q9DC48 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Cdc40Q9DC48 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC19.77■□□□□ 0.75
Cdc40Q9DC48 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.75
Cdc40Q9DC48 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC19.77■□□□□ 0.75
Cdc40Q9DC48 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC19.76■□□□□ 0.75
Cdc40Q9DC48 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
Cdc40Q9DC48 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
Cdc40Q9DC48 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
Cdc40Q9DC48 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Cdc40Q9DC48 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Cdc40Q9DC48 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Cdc40Q9DC48 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC19.75■□□□□ 0.75
Cdc40Q9DC48 AC117245.4-201ENSMUST00000217388 1646 ntBASIC19.75■□□□□ 0.75
Cdc40Q9DC48 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Cdc40Q9DC48 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Cdc40Q9DC48 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
Cdc40Q9DC48 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Cdc40Q9DC48 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
Cdc40Q9DC48 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Cdc40Q9DC48 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
Cdc40Q9DC48 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Cdc40Q9DC48 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC19.74■□□□□ 0.75
Cdc40Q9DC48 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
Cdc40Q9DC48 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Cdc40Q9DC48 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Cdc40Q9DC48 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Cdc40Q9DC48 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Cdc40Q9DC48 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
Cdc40Q9DC48 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Cdc40Q9DC48 Rps24-207ENSMUST00000224568 714 ntBASIC19.73■□□□□ 0.75
Cdc40Q9DC48 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Cdc40Q9DC48 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Cdc40Q9DC48 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Cdc40Q9DC48 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Cdc40Q9DC48 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
Cdc40Q9DC48 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
Cdc40Q9DC48 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Cdc40Q9DC48 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Cdc40Q9DC48 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Cdc40Q9DC48 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Cdc40Q9DC48 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Cdc40Q9DC48 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Cdc40Q9DC48 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Cdc40Q9DC48 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Cdc40Q9DC48 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Cdc40Q9DC48 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Cdc40Q9DC48 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC19.71■□□□□ 0.75
Cdc40Q9DC48 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cdc40Q9DC48 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC19.71■□□□□ 0.75
Cdc40Q9DC48 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC19.71■□□□□ 0.75
Cdc40Q9DC48 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cdc40Q9DC48 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cdc40Q9DC48 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cdc40Q9DC48 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Cdc40Q9DC48 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
Cdc40Q9DC48 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Cdc40Q9DC48 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Cdc40Q9DC48 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Cdc40Q9DC48 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC19.7■□□□□ 0.74
Cdc40Q9DC48 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC19.7■□□□□ 0.74
Cdc40Q9DC48 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Cdc40Q9DC48 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Cdc40Q9DC48 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Cdc40Q9DC48 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Cdc40Q9DC48 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Cdc40Q9DC48 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
Cdc40Q9DC48 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC19.7■□□□□ 0.74
Cdc40Q9DC48 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Cdc40Q9DC48 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
Cdc40Q9DC48 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
Cdc40Q9DC48 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
Cdc40Q9DC48 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC19.69■□□□□ 0.74
Cdc40Q9DC48 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC19.69■□□□□ 0.74
Cdc40Q9DC48 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
Cdc40Q9DC48 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Cdc40Q9DC48 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Cdc40Q9DC48 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
Cdc40Q9DC48 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Cdc40Q9DC48 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
Cdc40Q9DC48 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Cdc40Q9DC48 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC19.68■□□□□ 0.74
Cdc40Q9DC48 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Cdc40Q9DC48 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
Cdc40Q9DC48 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Cdc40Q9DC48 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
Cdc40Q9DC48 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Cdc40Q9DC48 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Cdc40Q9DC48 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
Cdc40Q9DC48 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 52 ms