Protein–RNA interactions for Protein: Q5R1I8

Trav3-1, T cell receptor alpha variable 3-1 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-1Q5R1I8 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Trav3-1Q5R1I8 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Trav3-1Q5R1I8 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav3-1Q5R1I8 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav3-1Q5R1I8 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC14.65□□□□□ -0.06
Trav3-1Q5R1I8 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav3-1Q5R1I8 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav3-1Q5R1I8 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
Trav3-1Q5R1I8 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav3-1Q5R1I8 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav3-1Q5R1I8 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav3-1Q5R1I8 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
Trav3-1Q5R1I8 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav3-1Q5R1I8 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav3-1Q5R1I8 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Trav3-1Q5R1I8 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav3-1Q5R1I8 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav3-1Q5R1I8 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav3-1Q5R1I8 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC14.64□□□□□ -0.07
Trav3-1Q5R1I8 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav3-1Q5R1I8 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav3-1Q5R1I8 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Trav3-1Q5R1I8 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav3-1Q5R1I8 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
Trav3-1Q5R1I8 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
Trav3-1Q5R1I8 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC14.63□□□□□ -0.07
Trav3-1Q5R1I8 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav3-1Q5R1I8 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Trav3-1Q5R1I8 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Trav3-1Q5R1I8 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav3-1Q5R1I8 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav3-1Q5R1I8 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav3-1Q5R1I8 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
Trav3-1Q5R1I8 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC14.62□□□□□ -0.07
Trav3-1Q5R1I8 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC14.62□□□□□ -0.07
Trav3-1Q5R1I8 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav3-1Q5R1I8 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav3-1Q5R1I8 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Trav3-1Q5R1I8 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav3-1Q5R1I8 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav3-1Q5R1I8 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav3-1Q5R1I8 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav3-1Q5R1I8 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav3-1Q5R1I8 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav3-1Q5R1I8 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav3-1Q5R1I8 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav3-1Q5R1I8 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav3-1Q5R1I8 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav3-1Q5R1I8 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav3-1Q5R1I8 Gm38342-201ENSMUST00000195710 2980 ntBASIC14.6□□□□□ -0.07
Trav3-1Q5R1I8 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav3-1Q5R1I8 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav3-1Q5R1I8 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav3-1Q5R1I8 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav3-1Q5R1I8 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC14.6□□□□□ -0.07
Trav3-1Q5R1I8 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav3-1Q5R1I8 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav3-1Q5R1I8 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Trav3-1Q5R1I8 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav3-1Q5R1I8 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav3-1Q5R1I8 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav3-1Q5R1I8 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav3-1Q5R1I8 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
Trav3-1Q5R1I8 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
Trav3-1Q5R1I8 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC14.59□□□□□ -0.07
Trav3-1Q5R1I8 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC14.59□□□□□ -0.07
Trav3-1Q5R1I8 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
Trav3-1Q5R1I8 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav3-1Q5R1I8 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav3-1Q5R1I8 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Trav3-1Q5R1I8 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav3-1Q5R1I8 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
Trav3-1Q5R1I8 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav3-1Q5R1I8 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC14.58□□□□□ -0.08
Trav3-1Q5R1I8 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav3-1Q5R1I8 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav3-1Q5R1I8 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav3-1Q5R1I8 Mipep-204ENSMUST00000225043 1548 ntBASIC14.57□□□□□ -0.08
Trav3-1Q5R1I8 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC14.57□□□□□ -0.08
Trav3-1Q5R1I8 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC14.57□□□□□ -0.08
Trav3-1Q5R1I8 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav3-1Q5R1I8 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav3-1Q5R1I8 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav3-1Q5R1I8 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav3-1Q5R1I8 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav3-1Q5R1I8 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC14.57□□□□□ -0.08
Trav3-1Q5R1I8 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav3-1Q5R1I8 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav3-1Q5R1I8 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Trav3-1Q5R1I8 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav3-1Q5R1I8 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav3-1Q5R1I8 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav3-1Q5R1I8 Gm42900-201ENSMUST00000197184 2167 ntBASIC14.56□□□□□ -0.08
Trav3-1Q5R1I8 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav3-1Q5R1I8 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav3-1Q5R1I8 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav3-1Q5R1I8 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Trav3-1Q5R1I8 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav3-1Q5R1I8 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav3-1Q5R1I8 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC14.55□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 91.9 ms