Protein–RNA interactions for Protein: G5E8X0

Cldn20, Claudin, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn20G5E8X0 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC18.57■□□□□ 0.56
Cldn20G5E8X0 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC18.56■□□□□ 0.56
Cldn20G5E8X0 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cldn20G5E8X0 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Cldn20G5E8X0 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC18.56■□□□□ 0.56
Cldn20G5E8X0 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cldn20G5E8X0 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cldn20G5E8X0 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cldn20G5E8X0 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cldn20G5E8X0 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cldn20G5E8X0 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC18.55■□□□□ 0.56
Cldn20G5E8X0 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cldn20G5E8X0 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC18.55■□□□□ 0.56
Cldn20G5E8X0 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cldn20G5E8X0 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
Cldn20G5E8X0 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cldn20G5E8X0 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC18.54■□□□□ 0.56
Cldn20G5E8X0 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Cldn20G5E8X0 AC115037.1-201ENSMUST00000223391 2173 ntBASIC18.54■□□□□ 0.56
Cldn20G5E8X0 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cldn20G5E8X0 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cldn20G5E8X0 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Cldn20G5E8X0 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
Cldn20G5E8X0 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.56
Cldn20G5E8X0 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC18.53■□□□□ 0.56
Cldn20G5E8X0 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cldn20G5E8X0 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Cldn20G5E8X0 Gm12818-201ENSMUST00000117562 1349 ntBASIC18.52■□□□□ 0.56
Cldn20G5E8X0 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
Cldn20G5E8X0 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Cldn20G5E8X0 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Cldn20G5E8X0 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC18.52■□□□□ 0.56
Cldn20G5E8X0 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Cldn20G5E8X0 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Cldn20G5E8X0 Pkd1-207ENSMUST00000228550 1050 ntBASIC18.52■□□□□ 0.56
Cldn20G5E8X0 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Cldn20G5E8X0 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Cldn20G5E8X0 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
Cldn20G5E8X0 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Cldn20G5E8X0 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
Cldn20G5E8X0 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Cldn20G5E8X0 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Cldn20G5E8X0 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Cldn20G5E8X0 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Cldn20G5E8X0 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC18.51■□□□□ 0.55
Cldn20G5E8X0 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
Cldn20G5E8X0 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC18.51■□□□□ 0.55
Cldn20G5E8X0 Gm9812-201ENSMUST00000061934 968 ntBASIC18.5■□□□□ 0.55
Cldn20G5E8X0 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Cldn20G5E8X0 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC18.5■□□□□ 0.55
Cldn20G5E8X0 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
Cldn20G5E8X0 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Cldn20G5E8X0 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
Cldn20G5E8X0 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC18.49■□□□□ 0.55
Cldn20G5E8X0 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Cldn20G5E8X0 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Cldn20G5E8X0 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Cldn20G5E8X0 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Cldn20G5E8X0 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
Cldn20G5E8X0 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC18.49■□□□□ 0.55
Cldn20G5E8X0 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Cldn20G5E8X0 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Cldn20G5E8X0 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Cldn20G5E8X0 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Cldn20G5E8X0 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Cldn20G5E8X0 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Cldn20G5E8X0 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
Cldn20G5E8X0 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Cldn20G5E8X0 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC18.48■□□□□ 0.55
Cldn20G5E8X0 AC122317.2-201ENSMUST00000218708 1248 ntBASIC18.48■□□□□ 0.55
Cldn20G5E8X0 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Cldn20G5E8X0 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Cldn20G5E8X0 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Cldn20G5E8X0 Gm28731-201ENSMUST00000185564 1569 ntBASIC18.47■□□□□ 0.55
Cldn20G5E8X0 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Cldn20G5E8X0 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Cldn20G5E8X0 AC124392.1-201ENSMUST00000225172 5324 ntBASIC18.47■□□□□ 0.55
Cldn20G5E8X0 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Cldn20G5E8X0 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Cldn20G5E8X0 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Cldn20G5E8X0 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Cldn20G5E8X0 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Cldn20G5E8X0 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Cldn20G5E8X0 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Cldn20G5E8X0 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Cldn20G5E8X0 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC18.46■□□□□ 0.55
Cldn20G5E8X0 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Cldn20G5E8X0 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Cldn20G5E8X0 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Cldn20G5E8X0 Gm34220-201ENSMUST00000223001 2709 ntBASIC18.46■□□□□ 0.55
Cldn20G5E8X0 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
Cldn20G5E8X0 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC18.46■□□□□ 0.55
Cldn20G5E8X0 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Cldn20G5E8X0 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Cldn20G5E8X0 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
Cldn20G5E8X0 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Cldn20G5E8X0 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Cldn20G5E8X0 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Cldn20G5E8X0 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Cldn20G5E8X0 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 126.9 ms