Protein–RNA interactions for Protein: F6ZNL5

Pcdh11x, Protocadherin 11 X-linked, mousemouse

Predictions only

Length 1,338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh11xF6ZNL5 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Pcdh11xF6ZNL5 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC23.9■■□□□ 1.42
Pcdh11xF6ZNL5 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC23.9■■□□□ 1.42
Pcdh11xF6ZNL5 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Pcdh11xF6ZNL5 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC23.89■■□□□ 1.42
Pcdh11xF6ZNL5 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
Pcdh11xF6ZNL5 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
Pcdh11xF6ZNL5 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC23.89■■□□□ 1.42
Pcdh11xF6ZNL5 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC23.89■■□□□ 1.42
Pcdh11xF6ZNL5 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC23.88■■□□□ 1.41
Pcdh11xF6ZNL5 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Pcdh11xF6ZNL5 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC23.88■■□□□ 1.41
Pcdh11xF6ZNL5 Nsd1-206ENSMUST00000224918 1001 ntBASIC23.87■■□□□ 1.41
Pcdh11xF6ZNL5 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
Pcdh11xF6ZNL5 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC23.87■■□□□ 1.41
Pcdh11xF6ZNL5 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Pcdh11xF6ZNL5 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC23.86■■□□□ 1.41
Pcdh11xF6ZNL5 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC23.86■■□□□ 1.41
Pcdh11xF6ZNL5 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Pcdh11xF6ZNL5 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
Pcdh11xF6ZNL5 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Pcdh11xF6ZNL5 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC23.84■■□□□ 1.41
Pcdh11xF6ZNL5 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC23.84■■□□□ 1.41
Pcdh11xF6ZNL5 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC23.84■■□□□ 1.41
Pcdh11xF6ZNL5 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
Pcdh11xF6ZNL5 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC23.83■■□□□ 1.41
Pcdh11xF6ZNL5 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
Pcdh11xF6ZNL5 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
Pcdh11xF6ZNL5 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
Pcdh11xF6ZNL5 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
Pcdh11xF6ZNL5 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
Pcdh11xF6ZNL5 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
Pcdh11xF6ZNL5 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC23.82■■□□□ 1.4
Pcdh11xF6ZNL5 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Pcdh11xF6ZNL5 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC23.81■■□□□ 1.4
Pcdh11xF6ZNL5 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Pcdh11xF6ZNL5 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Pcdh11xF6ZNL5 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC23.81■■□□□ 1.4
Pcdh11xF6ZNL5 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Pcdh11xF6ZNL5 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC23.8■■□□□ 1.4
Pcdh11xF6ZNL5 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC23.8■■□□□ 1.4
Pcdh11xF6ZNL5 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Pcdh11xF6ZNL5 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Pcdh11xF6ZNL5 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC23.8■■□□□ 1.4
Pcdh11xF6ZNL5 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC23.8■■□□□ 1.4
Pcdh11xF6ZNL5 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Pcdh11xF6ZNL5 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Pcdh11xF6ZNL5 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Pcdh11xF6ZNL5 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Pcdh11xF6ZNL5 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC23.79■■□□□ 1.4
Pcdh11xF6ZNL5 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Pcdh11xF6ZNL5 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC23.79■■□□□ 1.4
Pcdh11xF6ZNL5 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Pcdh11xF6ZNL5 Gm13042-201ENSMUST00000119244 1955 ntBASIC23.79■■□□□ 1.4
Pcdh11xF6ZNL5 Gm42418-201ENSMUST00000182010 1831 ntBASIC23.78■■□□□ 1.4
Pcdh11xF6ZNL5 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Pcdh11xF6ZNL5 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Pcdh11xF6ZNL5 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Pcdh11xF6ZNL5 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC23.78■■□□□ 1.4
Pcdh11xF6ZNL5 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
Pcdh11xF6ZNL5 Gm37415-201ENSMUST00000192265 2054 ntBASIC23.78■■□□□ 1.4
Pcdh11xF6ZNL5 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC23.77■■□□□ 1.4
Pcdh11xF6ZNL5 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC23.77■■□□□ 1.4
Pcdh11xF6ZNL5 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
Pcdh11xF6ZNL5 Gm43592-201ENSMUST00000196922 1165 ntBASIC23.77■■□□□ 1.4
Pcdh11xF6ZNL5 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Pcdh11xF6ZNL5 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC23.77■■□□□ 1.39
Pcdh11xF6ZNL5 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC23.76■■□□□ 1.39
Pcdh11xF6ZNL5 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Pcdh11xF6ZNL5 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Pcdh11xF6ZNL5 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC23.76■■□□□ 1.39
Pcdh11xF6ZNL5 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Pcdh11xF6ZNL5 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
Pcdh11xF6ZNL5 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
Pcdh11xF6ZNL5 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Pcdh11xF6ZNL5 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC23.76■■□□□ 1.39
Pcdh11xF6ZNL5 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC23.75■■□□□ 1.39
Pcdh11xF6ZNL5 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC23.75■■□□□ 1.39
Pcdh11xF6ZNL5 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC23.75■■□□□ 1.39
Pcdh11xF6ZNL5 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC23.75■■□□□ 1.39
Pcdh11xF6ZNL5 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Pcdh11xF6ZNL5 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC23.74■■□□□ 1.39
Pcdh11xF6ZNL5 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
Pcdh11xF6ZNL5 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC23.74■■□□□ 1.39
Pcdh11xF6ZNL5 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Pcdh11xF6ZNL5 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC23.74■■□□□ 1.39
Pcdh11xF6ZNL5 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC23.74■■□□□ 1.39
Pcdh11xF6ZNL5 Gm5921-201ENSMUST00000075898 882 ntBASIC23.74■■□□□ 1.39
Pcdh11xF6ZNL5 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC23.74■■□□□ 1.39
Pcdh11xF6ZNL5 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Pcdh11xF6ZNL5 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC23.73■■□□□ 1.39
Pcdh11xF6ZNL5 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Pcdh11xF6ZNL5 Gm32051-202ENSMUST00000197905 2385 ntBASIC23.73■■□□□ 1.39
Pcdh11xF6ZNL5 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC23.73■■□□□ 1.39
Pcdh11xF6ZNL5 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC23.73■■□□□ 1.39
Pcdh11xF6ZNL5 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
Pcdh11xF6ZNL5 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC23.73■■□□□ 1.39
Pcdh11xF6ZNL5 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC23.73■■□□□ 1.39
Pcdh11xF6ZNL5 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Pcdh11xF6ZNL5 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
Retrieved 100 of 76,532 protein–RNA pairs in 51.6 ms