Protein–RNA interactions for Protein: Q9CX13

Cnih4, Protein cornichon homolog 4, mousemouse

Predictions only

Length 139 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cnih4Q9CX13 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cnih4Q9CX13 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Cnih4Q9CX13 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cnih4Q9CX13 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC19.21■□□□□ 0.67
Cnih4Q9CX13 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cnih4Q9CX13 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cnih4Q9CX13 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cnih4Q9CX13 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cnih4Q9CX13 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
Cnih4Q9CX13 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cnih4Q9CX13 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cnih4Q9CX13 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cnih4Q9CX13 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC19.2■□□□□ 0.66
Cnih4Q9CX13 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cnih4Q9CX13 AC153524.1-201ENSMUST00000220436 1935 ntBASIC19.19■□□□□ 0.66
Cnih4Q9CX13 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cnih4Q9CX13 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cnih4Q9CX13 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cnih4Q9CX13 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cnih4Q9CX13 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
Cnih4Q9CX13 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cnih4Q9CX13 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Cnih4Q9CX13 Gm28731-201ENSMUST00000185564 1569 ntBASIC19.19■□□□□ 0.66
Cnih4Q9CX13 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Cnih4Q9CX13 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cnih4Q9CX13 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Cnih4Q9CX13 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cnih4Q9CX13 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Cnih4Q9CX13 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Cnih4Q9CX13 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC19.17■□□□□ 0.66
Cnih4Q9CX13 Gm43592-201ENSMUST00000196922 1165 ntBASIC19.17■□□□□ 0.66
Cnih4Q9CX13 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cnih4Q9CX13 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cnih4Q9CX13 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Cnih4Q9CX13 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC19.16■□□□□ 0.66
Cnih4Q9CX13 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cnih4Q9CX13 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cnih4Q9CX13 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cnih4Q9CX13 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cnih4Q9CX13 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cnih4Q9CX13 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cnih4Q9CX13 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cnih4Q9CX13 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Cnih4Q9CX13 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Cnih4Q9CX13 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Cnih4Q9CX13 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
Cnih4Q9CX13 Gm6934-201ENSMUST00000194780 1905 ntBASIC19.15■□□□□ 0.66
Cnih4Q9CX13 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cnih4Q9CX13 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Cnih4Q9CX13 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.66
Cnih4Q9CX13 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.66
Cnih4Q9CX13 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC19.14■□□□□ 0.66
Cnih4Q9CX13 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Cnih4Q9CX13 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Cnih4Q9CX13 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC19.14■□□□□ 0.65
Cnih4Q9CX13 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Cnih4Q9CX13 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
Cnih4Q9CX13 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Cnih4Q9CX13 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Cnih4Q9CX13 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC19.13■□□□□ 0.65
Cnih4Q9CX13 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Cnih4Q9CX13 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC19.13■□□□□ 0.65
Cnih4Q9CX13 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC19.13■□□□□ 0.65
Cnih4Q9CX13 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Cnih4Q9CX13 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Cnih4Q9CX13 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Cnih4Q9CX13 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Cnih4Q9CX13 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Cnih4Q9CX13 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Cnih4Q9CX13 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Cnih4Q9CX13 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Cnih4Q9CX13 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Cnih4Q9CX13 Dmtn-209ENSMUST00000228295 2572 ntBASIC19.12■□□□□ 0.65
Cnih4Q9CX13 Gm6277-202ENSMUST00000224036 2779 ntBASIC19.11■□□□□ 0.65
Cnih4Q9CX13 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Cnih4Q9CX13 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
Cnih4Q9CX13 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Cnih4Q9CX13 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Cnih4Q9CX13 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Cnih4Q9CX13 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC19.11■□□□□ 0.65
Cnih4Q9CX13 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Cnih4Q9CX13 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Cnih4Q9CX13 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Cnih4Q9CX13 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Cnih4Q9CX13 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Cnih4Q9CX13 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
Cnih4Q9CX13 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Cnih4Q9CX13 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Cnih4Q9CX13 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Cnih4Q9CX13 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
Cnih4Q9CX13 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC19.09■□□□□ 0.65
Cnih4Q9CX13 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Cnih4Q9CX13 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC19.09■□□□□ 0.65
Cnih4Q9CX13 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Cnih4Q9CX13 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Cnih4Q9CX13 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Cnih4Q9CX13 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Cnih4Q9CX13 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Cnih4Q9CX13 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Cnih4Q9CX13 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms