Protein–RNA interactions for Protein: Q62388

Atm, Serine-protein kinase ATM, mousemouse

Predictions only

Length 3,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AtmQ62388 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
AtmQ62388 Gm28536-201ENSMUST00000190971 1317 ntBASIC20.97■□□□□ 0.95
AtmQ62388 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
AtmQ62388 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
AtmQ62388 Gm27011-201ENSMUST00000182352 972 ntBASIC20.96■□□□□ 0.95
AtmQ62388 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
AtmQ62388 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
AtmQ62388 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
AtmQ62388 Gm6139-201ENSMUST00000079261 882 ntBASIC20.96■□□□□ 0.95
AtmQ62388 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC20.95■□□□□ 0.94
AtmQ62388 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
AtmQ62388 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
AtmQ62388 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC20.95■□□□□ 0.94
AtmQ62388 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
AtmQ62388 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
AtmQ62388 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
AtmQ62388 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
AtmQ62388 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC20.94■□□□□ 0.94
AtmQ62388 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC20.94■□□□□ 0.94
AtmQ62388 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC20.93■□□□□ 0.94
AtmQ62388 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
AtmQ62388 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
AtmQ62388 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
AtmQ62388 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
AtmQ62388 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
AtmQ62388 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC20.93■□□□□ 0.94
AtmQ62388 AC112142.1-201ENSMUST00000228796 918 ntBASIC20.93■□□□□ 0.94
AtmQ62388 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
AtmQ62388 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC20.93■□□□□ 0.94
AtmQ62388 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
AtmQ62388 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
AtmQ62388 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC20.92■□□□□ 0.94
AtmQ62388 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC20.91■□□□□ 0.94
AtmQ62388 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
AtmQ62388 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
AtmQ62388 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
AtmQ62388 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
AtmQ62388 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
AtmQ62388 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
AtmQ62388 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
AtmQ62388 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
AtmQ62388 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC20.9■□□□□ 0.94
AtmQ62388 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
AtmQ62388 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
AtmQ62388 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
AtmQ62388 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC20.89■□□□□ 0.94
AtmQ62388 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
AtmQ62388 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
AtmQ62388 AC153524.1-201ENSMUST00000220436 1935 ntBASIC20.89■□□□□ 0.93
AtmQ62388 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
AtmQ62388 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC20.89■□□□□ 0.93
AtmQ62388 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
AtmQ62388 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
AtmQ62388 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
AtmQ62388 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
AtmQ62388 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
AtmQ62388 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
AtmQ62388 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
AtmQ62388 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
AtmQ62388 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
AtmQ62388 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
AtmQ62388 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
AtmQ62388 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
AtmQ62388 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
AtmQ62388 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC20.87■□□□□ 0.93
AtmQ62388 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
AtmQ62388 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
AtmQ62388 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
AtmQ62388 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
AtmQ62388 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
AtmQ62388 Gm7199-201ENSMUST00000118327 1485 ntBASIC20.86■□□□□ 0.93
AtmQ62388 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
AtmQ62388 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
AtmQ62388 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC20.86■□□□□ 0.93
AtmQ62388 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC20.86■□□□□ 0.93
AtmQ62388 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
AtmQ62388 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
AtmQ62388 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC20.85■□□□□ 0.93
AtmQ62388 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC20.85■□□□□ 0.93
AtmQ62388 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
AtmQ62388 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC20.85■□□□□ 0.93
AtmQ62388 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC20.85■□□□□ 0.93
AtmQ62388 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
AtmQ62388 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC20.84■□□□□ 0.93
AtmQ62388 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC20.84■□□□□ 0.93
AtmQ62388 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
AtmQ62388 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
AtmQ62388 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
AtmQ62388 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
AtmQ62388 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
AtmQ62388 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
AtmQ62388 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
AtmQ62388 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
AtmQ62388 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
AtmQ62388 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC20.82■□□□□ 0.92
AtmQ62388 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
AtmQ62388 Gm28731-201ENSMUST00000185564 1569 ntBASIC20.82■□□□□ 0.92
AtmQ62388 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC20.82■□□□□ 0.92
AtmQ62388 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
AtmQ62388 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC20.82■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 28.2 ms