Protein–RNA interactions for Protein: A0A140LIP3

4933424G06Rik, RIKEN cDNA 4933424G06 gene, mousemouse

Predictions only

Length 267 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
4933424G06RikA0A140LIP3 Gm43438-201ENSMUST00000198133 379 ntBASIC14.1□□□□□ -0.15
4933424G06RikA0A140LIP3 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
4933424G06RikA0A140LIP3 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
4933424G06RikA0A140LIP3 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
4933424G06RikA0A140LIP3 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
4933424G06RikA0A140LIP3 AC126549.2-201ENSMUST00000223997 1976 ntBASIC14.1□□□□□ -0.15
4933424G06RikA0A140LIP3 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
4933424G06RikA0A140LIP3 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
4933424G06RikA0A140LIP3 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
4933424G06RikA0A140LIP3 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
4933424G06RikA0A140LIP3 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC14.1□□□□□ -0.15
4933424G06RikA0A140LIP3 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
4933424G06RikA0A140LIP3 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
4933424G06RikA0A140LIP3 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC14.09□□□□□ -0.15
4933424G06RikA0A140LIP3 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
4933424G06RikA0A140LIP3 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
4933424G06RikA0A140LIP3 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
4933424G06RikA0A140LIP3 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
4933424G06RikA0A140LIP3 Gm45760-201ENSMUST00000212190 1782 ntBASIC14.09□□□□□ -0.15
4933424G06RikA0A140LIP3 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
4933424G06RikA0A140LIP3 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
4933424G06RikA0A140LIP3 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC14.09□□□□□ -0.15
4933424G06RikA0A140LIP3 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
4933424G06RikA0A140LIP3 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
4933424G06RikA0A140LIP3 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
4933424G06RikA0A140LIP3 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
4933424G06RikA0A140LIP3 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
4933424G06RikA0A140LIP3 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
4933424G06RikA0A140LIP3 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
4933424G06RikA0A140LIP3 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC14.09□□□□□ -0.15
4933424G06RikA0A140LIP3 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
4933424G06RikA0A140LIP3 Gm4984-201ENSMUST00000115987 360 ntBASIC14.09□□□□□ -0.15
4933424G06RikA0A140LIP3 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC14.09□□□□□ -0.15
4933424G06RikA0A140LIP3 Gm12416-201ENSMUST00000120911 1008 ntBASIC14.09□□□□□ -0.15
4933424G06RikA0A140LIP3 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
4933424G06RikA0A140LIP3 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC14.09□□□□□ -0.15
4933424G06RikA0A140LIP3 Gm45711-202ENSMUST00000164175 979 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
4933424G06RikA0A140LIP3 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
4933424G06RikA0A140LIP3 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
4933424G06RikA0A140LIP3 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC14.09□□□□□ -0.15
4933424G06RikA0A140LIP3 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
4933424G06RikA0A140LIP3 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
4933424G06RikA0A140LIP3 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
4933424G06RikA0A140LIP3 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
4933424G06RikA0A140LIP3 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
4933424G06RikA0A140LIP3 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC14.09□□□□□ -0.15
4933424G06RikA0A140LIP3 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
4933424G06RikA0A140LIP3 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
4933424G06RikA0A140LIP3 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
4933424G06RikA0A140LIP3 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC14.09□□□□□ -0.15
4933424G06RikA0A140LIP3 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC14.09□□□□□ -0.15
4933424G06RikA0A140LIP3 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
4933424G06RikA0A140LIP3 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
4933424G06RikA0A140LIP3 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
4933424G06RikA0A140LIP3 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
4933424G06RikA0A140LIP3 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
4933424G06RikA0A140LIP3 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
4933424G06RikA0A140LIP3 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
4933424G06RikA0A140LIP3 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
4933424G06RikA0A140LIP3 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
4933424G06RikA0A140LIP3 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
4933424G06RikA0A140LIP3 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
4933424G06RikA0A140LIP3 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
4933424G06RikA0A140LIP3 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
4933424G06RikA0A140LIP3 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
4933424G06RikA0A140LIP3 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.15
4933424G06RikA0A140LIP3 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
4933424G06RikA0A140LIP3 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
4933424G06RikA0A140LIP3 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
4933424G06RikA0A140LIP3 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
4933424G06RikA0A140LIP3 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
4933424G06RikA0A140LIP3 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
4933424G06RikA0A140LIP3 Gm5069-202ENSMUST00000192714 1011 ntBASIC14.08□□□□□ -0.16
4933424G06RikA0A140LIP3 Gm4971-201ENSMUST00000205991 1108 ntBASIC14.08□□□□□ -0.16
4933424G06RikA0A140LIP3 AC192088.1-201ENSMUST00000227561 301 ntBASIC14.08□□□□□ -0.16
4933424G06RikA0A140LIP3 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
4933424G06RikA0A140LIP3 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
4933424G06RikA0A140LIP3 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
4933424G06RikA0A140LIP3 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
4933424G06RikA0A140LIP3 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
4933424G06RikA0A140LIP3 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
4933424G06RikA0A140LIP3 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
4933424G06RikA0A140LIP3 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
4933424G06RikA0A140LIP3 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
4933424G06RikA0A140LIP3 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
4933424G06RikA0A140LIP3 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
4933424G06RikA0A140LIP3 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
4933424G06RikA0A140LIP3 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
4933424G06RikA0A140LIP3 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
4933424G06RikA0A140LIP3 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
4933424G06RikA0A140LIP3 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
4933424G06RikA0A140LIP3 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
4933424G06RikA0A140LIP3 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC14.07□□□□□ -0.16
4933424G06RikA0A140LIP3 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
4933424G06RikA0A140LIP3 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
4933424G06RikA0A140LIP3 Mir698-201ENSMUST00000102164 109 ntBASIC14.07□□□□□ -0.16
4933424G06RikA0A140LIP3 Gm12485-201ENSMUST00000119641 291 ntBASIC14.07□□□□□ -0.16
4933424G06RikA0A140LIP3 Gm15376-201ENSMUST00000122258 783 ntBASIC14.07□□□□□ -0.16
4933424G06RikA0A140LIP3 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
4933424G06RikA0A140LIP3 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 56.2 ms