Protein–RNA interactions for Protein: Q9DCB1

Hmgn3, High mobility group nucleosome-binding domain-containing protein 3, mousemouse

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgn3Q9DCB1 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Hmgn3Q9DCB1 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Hmgn3Q9DCB1 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Hmgn3Q9DCB1 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Hmgn3Q9DCB1 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC20.44■□□□□ 0.86
Hmgn3Q9DCB1 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Hmgn3Q9DCB1 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Hmgn3Q9DCB1 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Hmgn3Q9DCB1 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Hmgn3Q9DCB1 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Hmgn3Q9DCB1 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC20.43■□□□□ 0.86
Hmgn3Q9DCB1 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Hmgn3Q9DCB1 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Hmgn3Q9DCB1 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Hmgn3Q9DCB1 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC20.42■□□□□ 0.86
Hmgn3Q9DCB1 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Hmgn3Q9DCB1 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Hmgn3Q9DCB1 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
Hmgn3Q9DCB1 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Hmgn3Q9DCB1 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Hmgn3Q9DCB1 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Hmgn3Q9DCB1 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC20.41■□□□□ 0.86
Hmgn3Q9DCB1 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC20.4■□□□□ 0.86
Hmgn3Q9DCB1 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Hmgn3Q9DCB1 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Hmgn3Q9DCB1 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC20.4■□□□□ 0.86
Hmgn3Q9DCB1 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Hmgn3Q9DCB1 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC20.39■□□□□ 0.86
Hmgn3Q9DCB1 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.86
Hmgn3Q9DCB1 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Hmgn3Q9DCB1 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Hmgn3Q9DCB1 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Hmgn3Q9DCB1 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Hmgn3Q9DCB1 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Hmgn3Q9DCB1 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Hmgn3Q9DCB1 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Hmgn3Q9DCB1 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC20.38■□□□□ 0.85
Hmgn3Q9DCB1 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC20.38■□□□□ 0.85
Hmgn3Q9DCB1 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Hmgn3Q9DCB1 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Hmgn3Q9DCB1 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Hmgn3Q9DCB1 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Hmgn3Q9DCB1 Gm15043-201ENSMUST00000118843 1543 ntBASIC20.37■□□□□ 0.85
Hmgn3Q9DCB1 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Hmgn3Q9DCB1 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC20.37■□□□□ 0.85
Hmgn3Q9DCB1 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
Hmgn3Q9DCB1 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Hmgn3Q9DCB1 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
Hmgn3Q9DCB1 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Hmgn3Q9DCB1 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Hmgn3Q9DCB1 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Hmgn3Q9DCB1 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Hmgn3Q9DCB1 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Hmgn3Q9DCB1 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Hmgn3Q9DCB1 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Hmgn3Q9DCB1 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Hmgn3Q9DCB1 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Hmgn3Q9DCB1 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
Hmgn3Q9DCB1 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
Hmgn3Q9DCB1 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Hmgn3Q9DCB1 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Hmgn3Q9DCB1 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
Hmgn3Q9DCB1 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Hmgn3Q9DCB1 Gm37136-201ENSMUST00000194368 194 ntBASIC20.34■□□□□ 0.85
Hmgn3Q9DCB1 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Hmgn3Q9DCB1 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Hmgn3Q9DCB1 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC20.33■□□□□ 0.85
Hmgn3Q9DCB1 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Hmgn3Q9DCB1 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
Hmgn3Q9DCB1 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Hmgn3Q9DCB1 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Hmgn3Q9DCB1 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Hmgn3Q9DCB1 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Hmgn3Q9DCB1 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Hmgn3Q9DCB1 Gm10616-201ENSMUST00000205285 2127 ntBASIC20.33■□□□□ 0.84
Hmgn3Q9DCB1 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Hmgn3Q9DCB1 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC20.33■□□□□ 0.84
Hmgn3Q9DCB1 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
Hmgn3Q9DCB1 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Hmgn3Q9DCB1 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC20.32■□□□□ 0.84
Hmgn3Q9DCB1 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Hmgn3Q9DCB1 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Hmgn3Q9DCB1 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Hmgn3Q9DCB1 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC20.31■□□□□ 0.84
Hmgn3Q9DCB1 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC20.31■□□□□ 0.84
Hmgn3Q9DCB1 Gm42418-201ENSMUST00000182010 1831 ntBASIC20.3■□□□□ 0.84
Hmgn3Q9DCB1 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Hmgn3Q9DCB1 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
Hmgn3Q9DCB1 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
Hmgn3Q9DCB1 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Hmgn3Q9DCB1 AC164433.2-201ENSMUST00000226346 1701 ntBASIC20.3■□□□□ 0.84
Hmgn3Q9DCB1 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Hmgn3Q9DCB1 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC20.29■□□□□ 0.84
Hmgn3Q9DCB1 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Hmgn3Q9DCB1 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
Hmgn3Q9DCB1 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC20.29■□□□□ 0.84
Hmgn3Q9DCB1 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Hmgn3Q9DCB1 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Hmgn3Q9DCB1 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC20.29■□□□□ 0.84
Hmgn3Q9DCB1 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 45.8 ms