Protein–RNA interactions for Protein: Q99PP7

Trim33, E3 ubiquitin-protein ligase TRIM33, mousemouse

Predictions only

Length 1,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim33Q99PP7 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Trim33Q99PP7 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
Trim33Q99PP7 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
Trim33Q99PP7 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC21.43■■□□□ 1.02
Trim33Q99PP7 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC21.43■■□□□ 1.02
Trim33Q99PP7 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC21.43■■□□□ 1.02
Trim33Q99PP7 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC21.43■■□□□ 1.02
Trim33Q99PP7 Gm6934-201ENSMUST00000194780 1905 ntBASIC21.43■■□□□ 1.02
Trim33Q99PP7 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Trim33Q99PP7 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC21.43■■□□□ 1.02
Trim33Q99PP7 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC21.42■■□□□ 1.02
Trim33Q99PP7 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
Trim33Q99PP7 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Trim33Q99PP7 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC21.42■■□□□ 1.02
Trim33Q99PP7 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC21.42■■□□□ 1.02
Trim33Q99PP7 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Trim33Q99PP7 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC21.41■■□□□ 1.02
Trim33Q99PP7 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Trim33Q99PP7 AC153524.1-201ENSMUST00000220436 1935 ntBASIC21.41■■□□□ 1.02
Trim33Q99PP7 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC21.4■■□□□ 1.02
Trim33Q99PP7 Gm28731-201ENSMUST00000185564 1569 ntBASIC21.4■■□□□ 1.02
Trim33Q99PP7 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Trim33Q99PP7 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC21.4■■□□□ 1.02
Trim33Q99PP7 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Trim33Q99PP7 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC21.39■■□□□ 1.01
Trim33Q99PP7 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Trim33Q99PP7 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Trim33Q99PP7 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Trim33Q99PP7 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Trim33Q99PP7 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC21.38■■□□□ 1.01
Trim33Q99PP7 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Trim33Q99PP7 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC21.38■■□□□ 1.01
Trim33Q99PP7 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC21.38■■□□□ 1.01
Trim33Q99PP7 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC21.38■■□□□ 1.01
Trim33Q99PP7 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
Trim33Q99PP7 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC21.37■■□□□ 1.01
Trim33Q99PP7 Gm10420-201ENSMUST00000121713 882 ntBASIC21.37■■□□□ 1.01
Trim33Q99PP7 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Trim33Q99PP7 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC21.37■■□□□ 1.01
Trim33Q99PP7 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Trim33Q99PP7 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC21.36■■□□□ 1.01
Trim33Q99PP7 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
Trim33Q99PP7 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
Trim33Q99PP7 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
Trim33Q99PP7 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Trim33Q99PP7 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
Trim33Q99PP7 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC21.36■■□□□ 1.01
Trim33Q99PP7 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Trim33Q99PP7 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Trim33Q99PP7 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Trim33Q99PP7 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Trim33Q99PP7 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC21.35■■□□□ 1.01
Trim33Q99PP7 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Trim33Q99PP7 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC21.35■■□□□ 1.01
Trim33Q99PP7 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Trim33Q99PP7 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC21.35■■□□□ 1.01
Trim33Q99PP7 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Trim33Q99PP7 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Trim33Q99PP7 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Trim33Q99PP7 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Trim33Q99PP7 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Trim33Q99PP7 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Trim33Q99PP7 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Trim33Q99PP7 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Trim33Q99PP7 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Trim33Q99PP7 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Trim33Q99PP7 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Trim33Q99PP7 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1.01
Trim33Q99PP7 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Trim33Q99PP7 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Trim33Q99PP7 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Trim33Q99PP7 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Trim33Q99PP7 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1
Trim33Q99PP7 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Trim33Q99PP7 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Trim33Q99PP7 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC21.32■■□□□ 1
Trim33Q99PP7 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Trim33Q99PP7 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Trim33Q99PP7 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC21.31■■□□□ 1
Trim33Q99PP7 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Trim33Q99PP7 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Trim33Q99PP7 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC21.3■■□□□ 1
Trim33Q99PP7 Gm5067-201ENSMUST00000170449 1009 ntBASIC21.3■■□□□ 1
Trim33Q99PP7 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
Trim33Q99PP7 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC21.3■■□□□ 1
Trim33Q99PP7 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
Trim33Q99PP7 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Trim33Q99PP7 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Trim33Q99PP7 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Trim33Q99PP7 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Trim33Q99PP7 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
Trim33Q99PP7 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC21.29■■□□□ 1
Trim33Q99PP7 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Trim33Q99PP7 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Trim33Q99PP7 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Trim33Q99PP7 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC21.29■■□□□ 1
Trim33Q99PP7 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC21.29■■□□□ 1
Trim33Q99PP7 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC21.28■■□□□ 1
Trim33Q99PP7 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Trim33Q99PP7 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Retrieved 100 of 76,532 protein–RNA pairs in 149.8 ms