Protein–RNA interactions for Protein: Q91XX8

Pcdhgb1, Protocadherin gamma B1, mousemouse

Predictions only

Length 918 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgb1Q91XX8 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Pcdhgb1Q91XX8 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Pcdhgb1Q91XX8 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Pcdhgb1Q91XX8 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Pcdhgb1Q91XX8 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Pcdhgb1Q91XX8 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
Pcdhgb1Q91XX8 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC22.6■■□□□ 1.21
Pcdhgb1Q91XX8 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Pcdhgb1Q91XX8 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC22.6■■□□□ 1.21
Pcdhgb1Q91XX8 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Pcdhgb1Q91XX8 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC22.6■■□□□ 1.21
Pcdhgb1Q91XX8 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC22.6■■□□□ 1.21
Pcdhgb1Q91XX8 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Pcdhgb1Q91XX8 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC22.59■■□□□ 1.21
Pcdhgb1Q91XX8 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC22.59■■□□□ 1.21
Pcdhgb1Q91XX8 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC22.59■■□□□ 1.21
Pcdhgb1Q91XX8 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Pcdhgb1Q91XX8 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
Pcdhgb1Q91XX8 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC22.58■■□□□ 1.21
Pcdhgb1Q91XX8 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC22.58■■□□□ 1.21
Pcdhgb1Q91XX8 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC22.58■■□□□ 1.21
Pcdhgb1Q91XX8 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Pcdhgb1Q91XX8 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
Pcdhgb1Q91XX8 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Pcdhgb1Q91XX8 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC22.57■■□□□ 1.2
Pcdhgb1Q91XX8 AC093043.1-201ENSMUST00000226700 898 ntBASIC22.57■■□□□ 1.2
Pcdhgb1Q91XX8 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC22.57■■□□□ 1.2
Pcdhgb1Q91XX8 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Pcdhgb1Q91XX8 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Pcdhgb1Q91XX8 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
Pcdhgb1Q91XX8 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC22.56■■□□□ 1.2
Pcdhgb1Q91XX8 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Pcdhgb1Q91XX8 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Pcdhgb1Q91XX8 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Pcdhgb1Q91XX8 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC22.55■■□□□ 1.2
Pcdhgb1Q91XX8 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC22.55■■□□□ 1.2
Pcdhgb1Q91XX8 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
Pcdhgb1Q91XX8 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC22.55■■□□□ 1.2
Pcdhgb1Q91XX8 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC22.55■■□□□ 1.2
Pcdhgb1Q91XX8 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Pcdhgb1Q91XX8 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC22.55■■□□□ 1.2
Pcdhgb1Q91XX8 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
Pcdhgb1Q91XX8 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC22.55■■□□□ 1.2
Pcdhgb1Q91XX8 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
Pcdhgb1Q91XX8 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC22.55■■□□□ 1.2
Pcdhgb1Q91XX8 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Pcdhgb1Q91XX8 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Pcdhgb1Q91XX8 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
Pcdhgb1Q91XX8 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC22.54■■□□□ 1.2
Pcdhgb1Q91XX8 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
Pcdhgb1Q91XX8 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
Pcdhgb1Q91XX8 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Pcdhgb1Q91XX8 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
Pcdhgb1Q91XX8 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
Pcdhgb1Q91XX8 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Pcdhgb1Q91XX8 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC22.53■■□□□ 1.2
Pcdhgb1Q91XX8 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Pcdhgb1Q91XX8 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC22.53■■□□□ 1.2
Pcdhgb1Q91XX8 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC22.53■■□□□ 1.2
Pcdhgb1Q91XX8 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Pcdhgb1Q91XX8 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC22.53■■□□□ 1.2
Pcdhgb1Q91XX8 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC22.53■■□□□ 1.2
Pcdhgb1Q91XX8 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC22.53■■□□□ 1.2
Pcdhgb1Q91XX8 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Pcdhgb1Q91XX8 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC22.52■■□□□ 1.2
Pcdhgb1Q91XX8 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC22.52■■□□□ 1.2
Pcdhgb1Q91XX8 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Pcdhgb1Q91XX8 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
Pcdhgb1Q91XX8 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Pcdhgb1Q91XX8 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC22.51■■□□□ 1.19
Pcdhgb1Q91XX8 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Pcdhgb1Q91XX8 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
Pcdhgb1Q91XX8 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC22.51■■□□□ 1.19
Pcdhgb1Q91XX8 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
Pcdhgb1Q91XX8 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
Pcdhgb1Q91XX8 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Pcdhgb1Q91XX8 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC22.5■■□□□ 1.19
Pcdhgb1Q91XX8 AC117245.4-201ENSMUST00000217388 1646 ntBASIC22.5■■□□□ 1.19
Pcdhgb1Q91XX8 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC22.5■■□□□ 1.19
Pcdhgb1Q91XX8 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Pcdhgb1Q91XX8 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC22.5■■□□□ 1.19
Pcdhgb1Q91XX8 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC22.49■■□□□ 1.19
Pcdhgb1Q91XX8 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Pcdhgb1Q91XX8 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Pcdhgb1Q91XX8 Gm22567-201ENSMUST00000175542 342 ntBASIC22.49■■□□□ 1.19
Pcdhgb1Q91XX8 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC22.49■■□□□ 1.19
Pcdhgb1Q91XX8 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Pcdhgb1Q91XX8 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Pcdhgb1Q91XX8 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC22.48■■□□□ 1.19
Pcdhgb1Q91XX8 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Pcdhgb1Q91XX8 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC22.48■■□□□ 1.19
Pcdhgb1Q91XX8 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Pcdhgb1Q91XX8 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Pcdhgb1Q91XX8 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Pcdhgb1Q91XX8 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC22.48■■□□□ 1.19
Pcdhgb1Q91XX8 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
Pcdhgb1Q91XX8 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Pcdhgb1Q91XX8 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Pcdhgb1Q91XX8 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Pcdhgb1Q91XX8 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
Retrieved 100 of 76,532 protein–RNA pairs in 16.4 ms